Cow genome map
| Conread name: | rtra13_j5r1.y1 |
| Conread position: | 67-288 |
| Cow position: | chr14:47602610-47602844 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 17, 11 |
| Conread position: | 72-288 |
| Cow position: | chr14:17488884-17488676 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 43, 8 |
| Conread position: | 94-288 |
| Cow position: | chr14:37256622-37256820 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 149, 44 |
| Conread position: | 105-286 |
| Cow position: | chr14:40345014-40345189 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 105-288 |
| Cow position: | chr14:12545135-12545327 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 147, 59 |
| Conread position: | 105-288 |
| Cow position: | chr14:21541438-21541246 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 149, 59 |
| Conread position: | 105-288 |
| Cow position: | chr14:34040659-34040469 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 56, 29 |
| Conread position: | 105-288 |
| Cow position: | chr14:44554332-44554523 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 151, 59 |
| Conread position: | 109-286 |
| Cow position: | chr14:23254864-23254677 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 6, 56 |
| Conread position: | 109-287 |
| Cow position: | chr14:13275548-13275736 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 155 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 6, 56 |
| Conread position: | 109-288 |
| Cow position: | chr14:749125-748936 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 6, 56 |
| Conread position: | 109-288 |
| Cow position: | chr14:1726621-1726810 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 10, 56 |
| Conread position: | 109-288 |
| Cow position: | chr14:2288727-2288916 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 156 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 6, 56 |
| Conread position: | 109-288 |
| Cow position: | chr14:5531814-5532003 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 159 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 10, 56 |
| Conread position: | 109-288 |
| Cow position: | chr14:5644878-5645069 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 158 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 6, 58 |
| Conread position: | 109-288 |
| Cow position: | chr14:7226882-7227071 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 157 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 6, 56 |
| Conread position: | 109-288 |
| Cow position: | chr14:9047312-9047501 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 158 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 6, 56 |
| Conread position: | 109-288 |
| Cow position: | chr14:9450055-9449866 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 5, 56 |
| Conread position: | 109-288 |
| Cow position: | chr14:9811155-9811344 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 156 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 6, 56 |
| Conread position: | 109-288 |
| Cow position: | chr14:11151440-11151253 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 10, 56 |
| Conread position: | 109-288 |
| Cow position: | chr14:11474820-11474627 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 10, 56 |
| Conread position: | 109-288 |
| Cow position: | chr14:12740575-12740386 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 156 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 10, 56 |
| Conread position: | 109-288 |
| Cow position: | chr14:12859164-12858975 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 158 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 6, 56 |
| Conread position: | 109-288 |
| Cow position: | chr14:13237325-13237136 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 6, 56 |
| Conread position: | 109-288 |
| Cow position: | chr14:13683040-13683229 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 158 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 6, 56 |
| Conread position: | 109-288 |
| Cow position: | chr14:15272787-15272598 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 157 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 10, 56 |
| Conread position: | 109-288 |
| Cow position: | chr14:15337159-15336970 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 160 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 6, 56 |
| Conread position: | 109-288 |
| Cow position: | chr14:16037074-16037263 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 6, 56 |
| Conread position: | 109-288 |
| Cow position: | chr14:16997565-16997376 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 10, 56 |
| Conread position: | 109-288 |
| Cow position: | chr14:19418568-19418757 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 6, 56 |
| Conread position: | 109-288 |
| Cow position: | chr14:19549673-19549858 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 6, 45 |
| Conread position: | 109-288 |
| Cow position: | chr14:20785569-20785758 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 155 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 10, 56 |
| Conread position: | 109-288 |
| Cow position: | chr14:22104083-22103894 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 159 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 6, 56 |
| Conread position: | 109-288 |
| Cow position: | chr14:27040909-27040720 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 10, 55 |
| Conread position: | 109-288 |
| Cow position: | chr14:28210390-28210579 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 10, 56 |
| Conread position: | 109-288 |
| Cow position: | chr14:29045199-29045010 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 6, 56 |
| Conread position: | 109-288 |
| Cow position: | chr14:32584551-32584362 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 10, 56 |
| Conread position: | 109-288 |
| Cow position: | chr14:34167777-34167965 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 157 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 6, 26 |
| Conread position: | 109-288 |
| Cow position: | chr14:38459677-38459489 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 157 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 6, 56 |
| Conread position: | 109-288 |
| Cow position: | chr14:40968629-40968818 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 158 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 6, 56 |
| Conread position: | 109-288 |
| Cow position: | chr14:45789452-45789640 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 157 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 6, 56 |
| Conread position: | 109-288 |
| Cow position: | chr14:46302380-46302568 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 156 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 10, 46 |
| Conread position: | 109-288 |
| Cow position: | chr14:47579092-47579281 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 6, 56 |
| Conread position: | 109-288 |
| Cow position: | chr14:48251975-48251786 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 10, 57 |
| Conread position: | 109-288 |
| Cow position: | chr14:50113844-50114030 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 10, 56 |
| Conread position: | 112-288 |
| Cow position: | chr14:7475337-7475520 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 143, 52 |
| Conread position: | 112-288 |
| Cow position: | chr14:21390865-21390683 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 71, 62 |
| Conread position: | 113-286 |
| Cow position: | chr14:192648-192830 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 151 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 141, 51 |
| Conread position: | 113-286 |
| Cow position: | chr14:48827688-48827866 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 139, 49 |
| Conread position: | 113-288 |
| Cow position: | chr14:8899765-8899942 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 123, 50 |
| Conread position: | 113-288 |
| Cow position: | chr14:13308222-13308395 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 141, 48 |
| Conread position: | 113-288 |
| Cow position: | chr14:13463878-13464061 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 141, 51 |
| Conread position: | 113-288 |
| Cow position: | chr14:21200400-21200585 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 152 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 141, 51 |
| Conread position: | 113-288 |
| Cow position: | chr14:30593781-30593597 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 141, 59 |
| Conread position: | 113-288 |
| Cow position: | chr14:32449448-32449632 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 151 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 140, 51 |
| Conread position: | 113-288 |
| Cow position: | chr14:33679528-33679712 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 143, 51 |
| Conread position: | 113-288 |
| Cow position: | chr14:37226652-37226836 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 141, 51 |
| Conread position: | 113-288 |
| Cow position: | chr14:44077204-44077023 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 141, 48 |
| Conread position: | 113-288 |
| Cow position: | chr14:46637053-46636869 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 153 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 143, 51 |
| Conread position: | 114-288 |
| Cow position: | chr14:35419361-35419544 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 138, 50 |
| Conread position: | 115-288 |
| Cow position: | chr14:28285068-28284887 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 139, 18 |
| Conread position: | 115-289 |
| Cow position: | chr14:48491048-48491231 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 139, 49 |
| Conread position: | 118-285 |
| Cow position: | chr14:22027288-22027112 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 136, 46 |
| Conread position: | 118-288 |
| Cow position: | chr14:16917242-16917063 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 136, 46 |
| Conread position: | 120-288 |
| Cow position: | chr14:44260952-44261129 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 134, 51 |
| Conread position: | 130-287 |
| Cow position: | chr14:34674597-34674763 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 124, 34 |
| Conread position: | 140-288 |
| Cow position: | chr14:38238590-38238433 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 116, 24 |
| Conread position: | 159-288 |
| Cow position: | chr14:13769767-13769628 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 162-288 |
| Cow position: | chr14:36710534-36710399 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 92, 12 |
| Conread position: | 166-288 |
| Cow position: | chr14:31882357-31882225 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 90, 0 |
Show alignments to all cow chromosomes.