Cow genome map

Conread name: rtra13_j5r1.y1

Conread position: 52-288
Cow position: chr15:2644927-2644679 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 188
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 63, 41

Conread position: 105-287
Cow position: chr15:24287026-24286838 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 142
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 146, 69

Conread position: 105-288
Cow position: chr15:1328318-1328510 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 151, 59

Conread position: 105-288
Cow position: chr15:13388898-13388705 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 149, 0

Conread position: 105-288
Cow position: chr15:14573831-14573636 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 56, 76

Conread position: 108-288
Cow position: chr15:4629759-4629569 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 148
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 11, 57

Conread position: 109-287
Cow position: chr15:3792417-3792228 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 155
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 6, 57

Conread position: 109-288
Cow position: chr15:1785247-1785433 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 149
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr15:2795673-2795862 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 148
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr15:3008355-3008171 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 148
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr15:3258030-3257841 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 148
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 10, 56

Conread position: 109-288
Cow position: chr15:3721653-3721465 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 154
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr15:3892038-3892231 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 155
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 6, 61

Conread position: 109-288
Cow position: chr15:4081479-4081669 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 156
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 6, 57

Conread position: 109-288
Cow position: chr15:5019870-5020059 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 155
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr15:6153453-6153264 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 156
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 10, 56

Conread position: 109-288
Cow position: chr15:6487937-6488126 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 151
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr15:6551138-6550947 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 151
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 5, 56

Conread position: 109-288
Cow position: chr15:6616276-6616465 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 157
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr15:6762618-6762429 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 156
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr15:7267082-7267266 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 154
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 6, 30

Conread position: 109-288
Cow position: chr15:7587303-7587114 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 156
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr15:7840812-7841001 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 157
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 10, 56

Conread position: 109-288
Cow position: chr15:8029530-8029341 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 152
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 8, 63

Conread position: 109-288
Cow position: chr15:10825952-10826143 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 155
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 6, 58

Conread position: 109-288
Cow position: chr15:12858620-12858809 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 159
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr15:16800752-16800941 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 153
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr15:17074884-17074695 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 151
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr15:18660795-18660984 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 154
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 10, 56

Conread position: 109-288
Cow position: chr15:19735321-19735132 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 157
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr15:20405138-20404949 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 155
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr15:21663264-21663075 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 152
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 10, 56

Conread position: 109-288
Cow position: chr15:21806327-21806516 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 159
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr15:22540339-22540150 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 152
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 10, 56

Conread position: 109-288
Cow position: chr15:23709034-23708845 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 153
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr15:24090306-24090495 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 156
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr15:25070016-25069827 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 160
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 6, 63

Conread position: 109-288
Cow position: chr15:28487650-28487461 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 157
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr15:31585921-31585731 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 157
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 6, 57

Conread position: 109-288
Cow position: chr15:32491410-32491221 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 153
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr15:32741445-32741634 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 151
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 10, 56

Conread position: 109-288
Cow position: chr15:32858344-32858533 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 156
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 10, 56

Conread position: 109-288
Cow position: chr15:35750817-35750628 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 156
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 10, 56

Conread position: 109-288
Cow position: chr15:42939394-42939583 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 154
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 10, 56

Conread position: 109-288
Cow position: chr15:42944129-42943939 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 160
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 6, 57

Conread position: 109-288
Cow position: chr15:50309022-50308833 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 159
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr15:51220219-51220409 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 157
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 10, 56

Conread position: 109-288
Cow position: chr15:52209018-52209207 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 156
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr15:52977435-52977624 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 156
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 6, 56

Conread position: 113-286
Cow position: chr15:1601071-1601248 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 133, 16

Conread position: 113-288
Cow position: chr15:4673824-4674000 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 139, 51

Conread position: 113-288
Cow position: chr15:4688515-4688699 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 143
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 141, 51

Conread position: 113-288
Cow position: chr15:4788315-4788131 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 146
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 141, 51

Conread position: 113-288
Cow position: chr15:4815040-4815227 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 145
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 53, 0

Conread position: 113-288
Cow position: chr15:4917673-4917854 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 142
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 123, 51

Conread position: 113-288
Cow position: chr15:5983126-5983307 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 155
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 141, 20

Conread position: 113-288
Cow position: chr15:6119871-6120054 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 149
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 69, 50

Conread position: 113-288
Cow position: chr15:6164607-6164424 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 147
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 141, 51

Conread position: 113-288
Cow position: chr15:7270824-7271004 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 149
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 141, 48

Conread position: 113-288
Cow position: chr15:7319051-7319235 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 151
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 143, 51

Conread position: 113-288
Cow position: chr15:8101941-8102123 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 141
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 141, 51

Conread position: 113-288
Cow position: chr15:13430307-13430491 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 153
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 143, 51

Conread position: 113-288
Cow position: chr15:13682819-13683003 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 149
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 141, 51

Conread position: 113-288
Cow position: chr15:18229549-18229732 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 153
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 142, 51

Conread position: 113-288
Cow position: chr15:18265278-18265094 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 155
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 142, 51

Conread position: 113-288
Cow position: chr15:31270388-31270204 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 149
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 143, 51

Conread position: 113-288
Cow position: chr15:32718126-32717942 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 146
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 141, 51

Conread position: 113-288
Cow position: chr15:35643968-35643784 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 150
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 55, 118

Conread position: 113-288
Cow position: chr15:36940904-36940715 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 154
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 21, 56

Conread position: 113-288
Cow position: chr15:44072931-44073114 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 149
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 139, 20

Conread position: 113-289
Cow position: chr15:16967012-16966828 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 152
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 141, 51

Conread position: 114-288
Cow position: chr15:51911047-51910867 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 140, 50

Conread position: 115-288
Cow position: chr15:6330626-6330801 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 143
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 33, 50

Conread position: 115-288
Cow position: chr15:23667009-23666827 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 151
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 141, 49

Conread position: 118-288
Cow position: chr15:4388237-4388414 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 145
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 131, 36

Conread position: 118-288
Cow position: chr15:17035140-17034964 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 148
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 136, 43

Conread position: 119-288
Cow position: chr15:4924653-4924825 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 147
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 140, 45

Conread position: 119-288
Cow position: chr15:6463575-6463742 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 138
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 25, 0

Conread position: 119-288
Cow position: chr15:15344614-15344436 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 145
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 133, 45

Conread position: 119-288
Cow position: chr15:18579219-18579393 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 145
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 135, 48

Conread position: 120-288
Cow position: chr15:1775633-1775810 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 128, 44

Conread position: 120-288
Cow position: chr15:17267003-17267181 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 143
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 134, 44

Conread position: 120-288
Cow position: chr15:21825355-21825532 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 144
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 133, 44

Conread position: 123-288
Cow position: chr15:23797623-23797794 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 131, 10

Conread position: 130-288
Cow position: chr15:1773946-1774113 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 134
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 126, 34

Conread position: 134-288
Cow position: chr15:2898486-2898323 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 134
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 122, 30

Conread position: 143-288
Cow position: chr15:21645590-21645436 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 128
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 113, 21

Conread position: 156-288
Cow position: chr15:4380797-4380655 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 40, 8

Conread position: 175-288
Cow position: chr15:33753736-33753613 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 81, 0

Conread position: 183-288
Cow position: chr15:44666659-44666544 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 71, 0

Show alignments to all cow chromosomes.