Cow genome map
| Conread name: | rtra13_j5r1.y1 |
| Conread position: | 94-288 |
| Cow position: | chr19:37844870-37844671 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 160, 13 |
| Conread position: | 105-288 |
| Cow position: | chr19:374796-374602 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 103, 46 |
| Conread position: | 105-288 |
| Cow position: | chr19:35611915-35611722 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 108-288 |
| Cow position: | chr19:12776043-12776224 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 11, 54 |
| Conread position: | 109-288 |
| Cow position: | chr19:207419-207608 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 157 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 10, 56 |
| Conread position: | 109-288 |
| Cow position: | chr19:474577-474388 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 158 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 6, 56 |
| Conread position: | 109-288 |
| Cow position: | chr19:524719-524908 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 6, 56 |
| Conread position: | 109-288 |
| Cow position: | chr19:776435-776622 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 159 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 8, 28 |
| Conread position: | 109-288 |
| Cow position: | chr19:890277-890088 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 10, 56 |
| Conread position: | 109-288 |
| Cow position: | chr19:1354362-1354174 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 156 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 145, 55 |
| Conread position: | 109-288 |
| Cow position: | chr19:2270378-2270193 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 145, 52 |
| Conread position: | 109-288 |
| Cow position: | chr19:4388502-4388691 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 10, 56 |
| Conread position: | 109-288 |
| Cow position: | chr19:5901946-5902135 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 157 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 6, 56 |
| Conread position: | 109-288 |
| Cow position: | chr19:7344953-7345142 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 159 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 6, 56 |
| Conread position: | 109-288 |
| Cow position: | chr19:7481016-7480826 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 6, 56 |
| Conread position: | 109-288 |
| Cow position: | chr19:10194561-10194750 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 156 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 6, 56 |
| Conread position: | 109-288 |
| Cow position: | chr19:10613147-10613336 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 157 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 6, 56 |
| Conread position: | 109-288 |
| Cow position: | chr19:12553313-12553124 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 10, 56 |
| Conread position: | 109-288 |
| Cow position: | chr19:12651655-12651844 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 10, 56 |
| Conread position: | 109-288 |
| Cow position: | chr19:16478946-16478758 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 10, 56 |
| Conread position: | 109-288 |
| Cow position: | chr19:19388753-19388942 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 156 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 6, 56 |
| Conread position: | 109-288 |
| Cow position: | chr19:20611253-20611442 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 6, 56 |
| Conread position: | 109-288 |
| Cow position: | chr19:21337913-21337724 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 160 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 10, 56 |
| Conread position: | 109-288 |
| Cow position: | chr19:24734057-24734251 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 6, 61 |
| Conread position: | 109-288 |
| Cow position: | chr19:28596296-28596483 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 6, 64 |
| Conread position: | 109-288 |
| Cow position: | chr19:28795397-28795211 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 10, 56 |
| Conread position: | 109-288 |
| Cow position: | chr19:30517722-30517911 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 156 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 10, 56 |
| Conread position: | 109-288 |
| Cow position: | chr19:33119807-33119616 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 159 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 6, 58 |
| Conread position: | 109-288 |
| Cow position: | chr19:33527766-33527955 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 158 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 6, 56 |
| Conread position: | 109-288 |
| Cow position: | chr19:39182619-39182432 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 10, 56 |
| Conread position: | 109-288 |
| Cow position: | chr19:52148629-52148441 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 6, 56 |
| Conread position: | 109-288 |
| Cow position: | chr19:55164735-55164549 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 157 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 6, 57 |
| Conread position: | 109-288 |
| Cow position: | chr19:55377814-55378003 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 6, 56 |
| Conread position: | 113-288 |
| Cow position: | chr19:731066-730882 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 135, 51 |
| Conread position: | 113-288 |
| Cow position: | chr19:1579030-1579219 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 29, 55 |
| Conread position: | 113-288 |
| Cow position: | chr19:1662954-1663134 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 143, 51 |
| Conread position: | 113-288 |
| Cow position: | chr19:16317685-16317501 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 154 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 143, 51 |
| Conread position: | 113-288 |
| Cow position: | chr19:28449746-28449934 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 109, 51 |
| Conread position: | 114-288 |
| Cow position: | chr19:29393267-29393450 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 154 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 142, 50 |
| Conread position: | 118-288 |
| Cow position: | chr19:48533657-48533836 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 138, 46 |
| Conread position: | 125-288 |
| Cow position: | chr19:29364330-29364499 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 123, 39 |
| Conread position: | 164-288 |
| Cow position: | chr19:7293266-7293132 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 178-288 |
| Cow position: | chr19:30037919-30037799 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 78, 0 |
Show alignments to all cow chromosomes.