Cow genome map
| Conread name: | rtra13_j5r1.y1 |
| Conread position: | 72-288 |
| Cow position: | chr23:609506-609730 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 179 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 43, 8 |
| Conread position: | 109-286 |
| Cow position: | chr23:21773094-21772910 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 6, 56 |
| Conread position: | 109-288 |
| Cow position: | chr23:670703-670892 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 160 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 6, 56 |
| Conread position: | 109-288 |
| Cow position: | chr23:1248715-1248526 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 157 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 6, 56 |
| Conread position: | 109-288 |
| Cow position: | chr23:1958942-1959131 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 6, 56 |
| Conread position: | 109-288 |
| Cow position: | chr23:2720268-2720457 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 12, 56 |
| Conread position: | 109-288 |
| Cow position: | chr23:2760714-2760900 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 10, 53 |
| Conread position: | 109-288 |
| Cow position: | chr23:3285571-3285760 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 6, 56 |
| Conread position: | 109-288 |
| Cow position: | chr23:3301668-3301857 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 161 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 56 |
| Conread position: | 109-288 |
| Cow position: | chr23:3417516-3417327 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 157 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 5, 56 |
| Conread position: | 109-288 |
| Cow position: | chr23:3709217-3709406 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 156 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 6, 56 |
| Conread position: | 109-288 |
| Cow position: | chr23:3878303-3878114 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 10, 56 |
| Conread position: | 109-288 |
| Cow position: | chr23:4080957-4081146 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 157 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 6, 56 |
| Conread position: | 109-288 |
| Cow position: | chr23:4265803-4265614 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 6, 56 |
| Conread position: | 109-288 |
| Cow position: | chr23:4891508-4891697 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 157 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 10, 56 |
| Conread position: | 109-288 |
| Cow position: | chr23:10680021-10679832 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 6, 56 |
| Conread position: | 109-288 |
| Cow position: | chr23:11781597-11781785 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 10, 56 |
| Conread position: | 109-288 |
| Cow position: | chr23:14216410-14216222 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 157 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 147, 55 |
| Conread position: | 109-288 |
| Cow position: | chr23:14790296-14790485 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 157 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 6, 56 |
| Conread position: | 109-288 |
| Cow position: | chr23:14960136-14959947 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 10, 56 |
| Conread position: | 109-288 |
| Cow position: | chr23:15216021-15215833 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 10, 56 |
| Conread position: | 109-288 |
| Cow position: | chr23:15528399-15528588 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 160 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 10, 56 |
| Conread position: | 109-288 |
| Cow position: | chr23:19317300-19317489 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 158 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 6, 56 |
| Conread position: | 109-288 |
| Cow position: | chr23:20153407-20153220 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 10, 31 |
| Conread position: | 109-288 |
| Cow position: | chr23:21008792-21008603 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 156 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 6, 56 |
| Conread position: | 109-288 |
| Cow position: | chr23:24119367-24119556 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 156 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 6, 56 |
| Conread position: | 109-288 |
| Cow position: | chr23:25351172-25351361 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 156 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 6, 57 |
| Conread position: | 109-288 |
| Cow position: | chr23:28084281-28084092 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 158 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 6, 56 |
| Conread position: | 109-288 |
| Cow position: | chr23:28221519-28221703 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 145, 55 |
| Conread position: | 109-288 |
| Cow position: | chr23:28987162-28987352 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 6, 57 |
| Conread position: | 109-288 |
| Cow position: | chr23:29042594-29042784 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 6, 57 |
| Conread position: | 109-288 |
| Cow position: | chr23:31605240-31605429 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 156 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 6, 56 |
| Conread position: | 109-288 |
| Cow position: | chr23:31703707-31703896 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 160 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 6, 56 |
| Conread position: | 109-288 |
| Cow position: | chr23:36028566-36028377 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 156 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 10, 56 |
| Conread position: | 109-288 |
| Cow position: | chr23:37199701-37199513 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 145, 55 |
| Conread position: | 111-288 |
| Cow position: | chr23:33434394-33434209 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 143, 53 |
| Conread position: | 113-288 |
| Cow position: | chr23:943798-943982 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 153 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 143, 51 |
| Conread position: | 113-288 |
| Cow position: | chr23:2024266-2024083 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 141, 10 |
| Conread position: | 113-288 |
| Cow position: | chr23:5624755-5624571 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 141, 51 |
| Conread position: | 113-288 |
| Cow position: | chr23:8290195-8290379 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 143, 51 |
| Conread position: | 113-288 |
| Cow position: | chr23:14971132-14970950 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 140, 48 |
| Conread position: | 113-288 |
| Cow position: | chr23:22169708-22169891 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 141, 51 |
| Conread position: | 113-288 |
| Cow position: | chr23:27401953-27402137 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 153 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 141, 51 |
| Conread position: | 113-288 |
| Cow position: | chr23:30634777-30634593 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 143, 51 |
| Conread position: | 113-288 |
| Cow position: | chr23:32493084-32493268 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 153 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 143, 51 |
| Conread position: | 113-289 |
| Cow position: | chr23:1338655-1338479 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 109, 48 |
| Conread position: | 115-288 |
| Cow position: | chr23:5871740-5871562 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 139, 18 |
| Conread position: | 120-286 |
| Cow position: | chr23:19492383-19492557 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 137, 41 |
| Conread position: | 123-288 |
| Cow position: | chr23:4532867-4532696 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 133, 11 |
| Conread position: | 138-288 |
| Cow position: | chr23:17845840-17845999 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 116, 26 |
| Conread position: | 164-288 |
| Cow position: | chr23:11079250-11079385 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 166-286 |
| Cow position: | chr23:28305432-28305562 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 90, 0 |
Show alignments to all cow chromosomes.