Cow genome map
| Conread name: | rtra13_j5r1.y1 |
| Conread position: | 86-288 |
| Cow position: | chr27:24296477-24296264 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 93, 78 |
| Conread position: | 103-288 |
| Cow position: | chr27:8261658-8261851 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 8, 59 |
| Conread position: | 105-288 |
| Cow position: | chr27:26855877-26856060 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 160 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 33 |
| Conread position: | 107-288 |
| Cow position: | chr27:29811148-29811333 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 147, 31 |
| Conread position: | 109-286 |
| Cow position: | chr27:166106-165920 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 6, 58 |
| Conread position: | 109-286 |
| Cow position: | chr27:9332560-9332747 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 10, 56 |
| Conread position: | 109-287 |
| Cow position: | chr27:4331927-4331739 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 10, 56 |
| Conread position: | 109-288 |
| Cow position: | chr27:773588-773777 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 157 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 6, 56 |
| Conread position: | 109-288 |
| Cow position: | chr27:1520493-1520682 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 6, 56 |
| Conread position: | 109-288 |
| Cow position: | chr27:2000656-2000847 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 6, 58 |
| Conread position: | 109-288 |
| Cow position: | chr27:3232718-3232532 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 10, 52 |
| Conread position: | 109-288 |
| Cow position: | chr27:4982185-4982374 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 10, 56 |
| Conread position: | 109-288 |
| Cow position: | chr27:8960216-8960027 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 6, 56 |
| Conread position: | 109-288 |
| Cow position: | chr27:8972260-8972446 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 147, 55 |
| Conread position: | 109-288 |
| Cow position: | chr27:12146830-12146641 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 157 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 6, 56 |
| Conread position: | 109-288 |
| Cow position: | chr27:15543828-15544017 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 6, 56 |
| Conread position: | 109-288 |
| Cow position: | chr27:18697154-18697343 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 156 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 6, 56 |
| Conread position: | 109-288 |
| Cow position: | chr27:22648093-22647904 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 157 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 6, 56 |
| Conread position: | 109-288 |
| Cow position: | chr27:27291207-27291392 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 5, 56 |
| Conread position: | 109-288 |
| Cow position: | chr27:29447263-29447074 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 159 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 6, 56 |
| Conread position: | 113-287 |
| Cow position: | chr27:13900712-13900895 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 152 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 141, 51 |
| Conread position: | 113-288 |
| Cow position: | chr27:21451261-21451447 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 113-288 |
| Cow position: | chr27:22723175-22723356 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 141, 51 |
| Conread position: | 113-288 |
| Cow position: | chr27:22742597-22742412 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 23, 52 |
| Conread position: | 113-288 |
| Cow position: | chr27:30035632-30035815 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 28, 52 |
| Conread position: | 118-288 |
| Cow position: | chr27:20716718-20716896 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 138, 16 |
| Conread position: | 119-288 |
| Cow position: | chr27:9990384-9990207 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 135, 45 |
| Conread position: | 123-288 |
| Cow position: | chr27:13353138-13353308 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 133, 48 |
| Conread position: | 126-288 |
| Cow position: | chr27:26329764-26329935 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 128, 38 |
| Conread position: | 147-288 |
| Cow position: | chr27:7911835-7911985 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 109, 17 |
Show alignments to all cow chromosomes.