Cow genome map

Conread name: rtra13_j5r1.y1

Conread position: 103-288
Cow position: chr8:39140703-39140897 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 151
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 153, 61

Conread position: 105-288
Cow position: chr8:18208877-18208692 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 116, 103

Conread position: 105-288
Cow position: chr8:24873215-24873023 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 148
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 149, 59

Conread position: 105-288
Cow position: chr8:32649749-32649939 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 142
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 149, 80

Conread position: 105-288
Cow position: chr8:40550225-40550031 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 146
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 87, 59

Conread position: 105-288
Cow position: chr8:58855744-58855933 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 56, 33

Conread position: 108-288
Cow position: chr8:13633835-13634021 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 146, 26

Conread position: 109-286
Cow position: chr8:14925822-14925635 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 156
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 5, 56

Conread position: 109-288
Cow position: chr8:1017225-1017413 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 154
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr8:1151227-1151037 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 155
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 6, 57

Conread position: 109-288
Cow position: chr8:1468190-1468379 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 157
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr8:1570187-1570376 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 152
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr8:1582555-1582744 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 156
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 6, 35

Conread position: 109-288
Cow position: chr8:3956103-3956292 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 153
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr8:5020073-5020259 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 154
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 10, 53

Conread position: 109-288
Cow position: chr8:6203222-6203033 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 156
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr8:6748697-6748508 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 146
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr8:7051494-7051684 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 156
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 6, 57

Conread position: 109-288
Cow position: chr8:7427838-7427649 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 156
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr8:8468344-8468531 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 152
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 10, 39

Conread position: 109-288
Cow position: chr8:8523883-8524072 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 154
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 6, 58

Conread position: 109-288
Cow position: chr8:8913789-8913977 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 152
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 10, 56

Conread position: 109-288
Cow position: chr8:9738586-9738774 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 155
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr8:10751412-10751601 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 157
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr8:13831872-13831682 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 156
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 6, 57

Conread position: 109-288
Cow position: chr8:15865239-15865050 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 156
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr8:19333640-19333829 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 153
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 10, 56

Conread position: 109-288
Cow position: chr8:19893082-19893270 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 156
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr8:21252305-21252494 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 157
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr8:22569231-22569042 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 152
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr8:22960459-22960270 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 156
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr8:23773701-23773887 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 159
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 10, 42

Conread position: 109-288
Cow position: chr8:24192322-24192511 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 156
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr8:24913232-24913043 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 154
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 10, 56

Conread position: 109-288
Cow position: chr8:25671362-25671545 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 150
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 11, 56

Conread position: 109-288
Cow position: chr8:25773573-25773390 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 153
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 11, 56

Conread position: 109-288
Cow position: chr8:26869089-26869276 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 158
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr8:26878314-26878512 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 161
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 6, 0

Conread position: 109-288
Cow position: chr8:30157747-30157935 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 152
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 8, 30

Conread position: 109-288
Cow position: chr8:31977343-31977154 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 155
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr8:33591424-33591612 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 154
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 10, 56

Conread position: 109-288
Cow position: chr8:33898854-33898665 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 156
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 10, 56

Conread position: 109-288
Cow position: chr8:38089040-38089226 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 155
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 10, 56

Conread position: 109-288
Cow position: chr8:38562374-38562192 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 144
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 9, 56

Conread position: 109-288
Cow position: chr8:41659746-41659558 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 153
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 6, 63

Conread position: 109-288
Cow position: chr8:42318204-42318015 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 157
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr8:42486973-42487162 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 153
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 10, 56

Conread position: 109-288
Cow position: chr8:45338100-45337911 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 154
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr8:45792656-45792467 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 156
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 10, 56

Conread position: 109-288
Cow position: chr8:50284154-50283965 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 155
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 10, 56

Conread position: 109-288
Cow position: chr8:50431077-50430888 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 156
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr8:51254583-51254395 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 155
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 8, 56

Conread position: 109-288
Cow position: chr8:51603819-51603631 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 149
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 9, 43

Conread position: 109-288
Cow position: chr8:55271464-55271275 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 153
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position: chr8:60066944-60067133 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 156
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 10, 56

Conread position: 109-288
Cow position: chr8:60266452-60266641 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 157
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 10, 56

Conread position: 109-289
Cow position: chr8:39192843-39192653 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 156
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 10, 56

Conread position: 110-288
Cow position: chr8:12287000-12287188 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 154
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 5, 55

Conread position: 112-288
Cow position: chr8:21091263-21091078 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 155
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 144, 52

Conread position: 113-282
Cow position: chr8:12056624-12056802 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 147
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 143, 51

Conread position: 113-286
Cow position: chr8:45070001-45070181 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 151
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 141, 51

Conread position: 113-288
Cow position: chr8:1116194-1116010 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 143
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 18, 26

Conread position: 113-288
Cow position: chr8:7250920-7251104 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 154
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 143, 51

Conread position: 113-288
Cow position: chr8:10740504-10740322 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 146
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 14, 49

Conread position: 113-288
Cow position: chr8:13736620-13736799 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 142
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 139, 24

Conread position: 113-288
Cow position: chr8:14588804-14588619 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 157
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 28, 52

Conread position: 113-288
Cow position: chr8:15219060-15218875 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 143
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 139, 0

Conread position: 113-288
Cow position: chr8:17200943-17200758 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 148
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 14, 52

Conread position: 113-288
Cow position: chr8:18484836-18485009 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 121
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 113-288
Cow position: chr8:21218805-21218981 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 140
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 116, 51

Conread position: 113-288
Cow position: chr8:24230502-24230682 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 139, 64

Conread position: 113-288
Cow position: chr8:25413680-25413864 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 154
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 141, 58

Conread position: 113-288
Cow position: chr8:30484172-30483988 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 138, 51

Conread position: 113-288
Cow position: chr8:32081463-32081276 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 145
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 42, 26

Conread position: 113-288
Cow position: chr8:32628941-32628757 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 152
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 143, 51

Conread position: 113-288
Cow position: chr8:46481214-46481032 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 147
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 138, 51

Conread position: 113-288
Cow position: chr8:46654676-46654858 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 143
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 141, 51

Conread position: 113-288
Cow position: chr8:46950749-46950930 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 149
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 141, 48

Conread position: 113-288
Cow position: chr8:47675905-47676082 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 24, 31

Conread position: 113-288
Cow position: chr8:49360718-49360903 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 144
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 23, 52

Conread position: 113-288
Cow position: chr8:52861319-52861483 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 144
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 114-288
Cow position: chr8:45225-45408 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 146
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 142, 50

Conread position: 115-288
Cow position: chr8:12539983-12539802 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 139, 8

Conread position: 118-288
Cow position: chr8:4689474-4689653 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 147
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 136, 46

Conread position: 118-288
Cow position: chr8:47659257-47659078 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 146
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 136, 46

Conread position: 119-288
Cow position: chr8:39775193-39775015 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 146
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 137, 45

Conread position: 119-288
Cow position: chr8:45355406-45355230 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 144
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 132, 15

Conread position: 120-288
Cow position: chr8:2824223-2824046 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 143
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 132, 44

Conread position: 120-288
Cow position: chr8:35472378-35472555 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 146
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 134, 44

Conread position: 122-288
Cow position: chr8:1110261-1110435 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 141
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 134, 17

Conread position: 122-288
Cow position: chr8:22377111-22376936 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 132, 42

Conread position: 123-287
Cow position: chr8:12446316-12446144 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 136
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 133, 19

Conread position: 124-288
Cow position: chr8:55445331-55445158 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 143
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 132, 40

Conread position: 129-288
Cow position: chr8:40584154-40584321 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 140
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 127, 13

Conread position: 137-288
Cow position: chr8:32041882-32042042 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 130
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 118, 27

Conread position: 140-288
Cow position: chr8:19052387-19052544 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 129
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 112, 24

Conread position: 166-288
Cow position: chr8:26606371-26606503 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 166-288
Cow position: chr8:27943049-27942917 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 109
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 90, 0

Conread position: 181-288
Cow position: chr8:26878677-26878794 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 75, 0

Show alignments to all cow chromosomes.