Cow genome map

Conread name: rtra13_j5r1.y1

Conread position: 72-288
Cow position:
Alignm length: 228
Alignm identity: 179
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 43, 8

Conread position: 92-288
Cow position:
Alignm length: 208
Alignm identity: 158
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 147, 15

Conread position: 105-288
Cow position:
Alignm length: 193
Alignm identity: 146
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 149, 59

Conread position: 105-288
Cow position:
Alignm length: 193
Alignm identity: 142
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 80, 57

Conread position: 106-288
Cow position:
Alignm length: 185
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 153, 58

Conread position: 108-288
Cow position:
Alignm length: 192
Alignm identity: 149
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 11, 57

Conread position: 109-287
Cow position:
Alignm length: 190
Alignm identity: 156
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position:
Alignm length: 191
Alignm identity: 152
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position:
Alignm length: 197
Alignm identity: 154
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position:
Alignm length: 193
Alignm identity: 158
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 6, 58

Conread position: 109-288
Cow position:
Alignm length: 191
Alignm identity: 154
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position:
Alignm length: 192
Alignm identity: 152
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 6, 57

Conread position: 109-288
Cow position:
Alignm length: 191
Alignm identity: 150
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position:
Alignm length: 191
Alignm identity: 152
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position:
Alignm length: 191
Alignm identity: 146
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 10, 56

Conread position: 109-288
Cow position:
Alignm length: 190
Alignm identity: 152
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position:
Alignm length: 191
Alignm identity: 151
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 5, 56

Conread position: 109-288
Cow position:
Alignm length: 191
Alignm identity: 153
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position:
Alignm length: 191
Alignm identity: 153
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position:
Alignm length: 191
Alignm identity: 115
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 10, 0

Conread position: 109-288
Cow position:
Alignm length: 192
Alignm identity: 153
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 6, 57

Conread position: 109-288
Cow position:
Alignm length: 191
Alignm identity: 156
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position:
Alignm length: 191
Alignm identity: 157
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position:
Alignm length: 191
Alignm identity: 157
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position:
Alignm length: 191
Alignm identity: 159
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position:
Alignm length: 191
Alignm identity: 159
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 10, 56

Conread position: 109-288
Cow position:
Alignm length: 191
Alignm identity: 158
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position:
Alignm length: 191
Alignm identity: 156
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 7, 56

Conread position: 109-288
Cow position:
Alignm length: 193
Alignm identity: 155
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 7, 58

Conread position: 109-288
Cow position:
Alignm length: 196
Alignm identity: 159
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 6, 61

Conread position: 109-288
Cow position:
Alignm length: 191
Alignm identity: 153
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 10, 56

Conread position: 109-288
Cow position:
Alignm length: 191
Alignm identity: 150
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position:
Alignm length: 191
Alignm identity: 158
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 10, 56

Conread position: 109-288
Cow position:
Alignm length: 191
Alignm identity: 155
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position:
Alignm length: 191
Alignm identity: 158
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position:
Alignm length: 191
Alignm identity: 160
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position:
Alignm length: 191
Alignm identity: 155
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 10, 56

Conread position: 109-288
Cow position:
Alignm length: 191
Alignm identity: 156
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 10, 56

Conread position: 109-288
Cow position:
Alignm length: 195
Alignm identity: 161
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 6, 60

Conread position: 109-288
Cow position:
Alignm length: 191
Alignm identity: 154
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 10, 56

Conread position: 109-288
Cow position:
Alignm length: 190
Alignm identity: 151
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 10, 56

Conread position: 109-288
Cow position:
Alignm length: 191
Alignm identity: 155
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 10, 56

Conread position: 109-288
Cow position:
Alignm length: 191
Alignm identity: 158
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position:
Alignm length: 191
Alignm identity: 159
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position:
Alignm length: 191
Alignm identity: 156
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 10, 56

Conread position: 109-288
Cow position:
Alignm length: 191
Alignm identity: 150
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 6, 26

Conread position: 109-288
Cow position:
Alignm length: 191
Alignm identity: 156
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position:
Alignm length: 191
Alignm identity: 156
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position:
Alignm length: 191
Alignm identity: 156
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 11, 56

Conread position: 109-288
Cow position:
Alignm length: 191
Alignm identity: 157
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position:
Alignm length: 191
Alignm identity: 157
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position:
Alignm length: 181
Alignm identity: 136
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position:
Alignm length: 191
Alignm identity: 152
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 6, 64

Conread position: 109-288
Cow position:
Alignm length: 191
Alignm identity: 155
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 6, 45

Conread position: 109-288
Cow position:
Alignm length: 191
Alignm identity: 152
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 10, 56

Conread position: 109-288
Cow position:
Alignm length: 191
Alignm identity: 150
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position:
Alignm length: 193
Alignm identity: 159
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 8, 57

Conread position: 109-288
Cow position:
Alignm length: 191
Alignm identity: 156
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position:
Alignm length: 191
Alignm identity: 153
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 8, 56

Conread position: 109-288
Cow position:
Alignm length: 191
Alignm identity: 156
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 6, 56

Conread position: 109-288
Cow position:
Alignm length: 191
Alignm identity: 155
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 10, 56

Conread position: 109-288
Cow position:
Alignm length: 191
Alignm identity: 155
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 6, 56

Conread position: 110-288
Cow position:
Alignm length: 189
Alignm identity: 154
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 146, 54

Conread position: 113-286
Cow position:
Alignm length: 174
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 113-288
Cow position:
Alignm length: 187
Alignm identity: 151
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 28, 23

Conread position: 113-288
Cow position:
Alignm length: 191
Alignm identity: 148
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 17, 52

Conread position: 113-288
Cow position:
Alignm length: 195
Alignm identity: 145
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 24, 10

Conread position: 113-288
Cow position:
Alignm length: 186
Alignm identity: 147
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 141, 51

Conread position: 113-288
Cow position:
Alignm length: 179
Alignm identity: 142
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 7, 52

Conread position: 113-288
Cow position:
Alignm length: 186
Alignm identity: 133
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 141, 51

Conread position: 113-288
Cow position:
Alignm length: 189
Alignm identity: 149
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 70, 37

Conread position: 113-288
Cow position:
Alignm length: 186
Alignm identity: 153
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 141, 51

Conread position: 113-288
Cow position:
Alignm length: 186
Alignm identity: 135
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 141, 51

Conread position: 113-288
Cow position:
Alignm length: 186
Alignm identity: 154
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 141, 51

Conread position: 113-288
Cow position:
Alignm length: 185
Alignm identity: 149
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 143, 51

Conread position: 113-288
Cow position:
Alignm length: 186
Alignm identity: 147
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 138, 61

Conread position: 114-287
Cow position:
Alignm length: 181
Alignm identity: 144
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 139, 47

Conread position: 114-288
Cow position:
Alignm length: 185
Alignm identity: 147
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 137, 50

Conread position: 114-288
Cow position:
Alignm length: 185
Alignm identity: 143
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 134, 63

Conread position: 114-288
Cow position:
Alignm length: 184
Alignm identity: 144
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 140, 19

Conread position: 116-287
Cow position:
Alignm length: 182
Alignm identity: 146
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 140, 48

Conread position: 118-284
Cow position:
Alignm length: 177
Alignm identity: 143
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 136, 53

Conread position: 118-288
Cow position:
Alignm length: 181
Alignm identity: 153
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 136, 46

Conread position: 118-288
Cow position:
Alignm length: 181
Alignm identity: 140
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 133, 46

Conread position: 118-288
Cow position:
Alignm length: 181
Alignm identity: 141
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 136, 46

Conread position: 119-288
Cow position:
Alignm length: 180
Alignm identity: 144
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 135, 45

Conread position: 119-288
Cow position:
Alignm length: 180
Alignm identity: 149
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 135, 45

Conread position: 120-286
Cow position:
Alignm length: 177
Alignm identity: 142
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 134, 44

Conread position: 124-288
Cow position:
Alignm length: 175
Alignm identity: 144
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 132, 40

Conread position: 124-288
Cow position:
Alignm length: 175
Alignm identity: 140
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 132, 40

Conread position: 124-288
Cow position:
Alignm length: 175
Alignm identity: 142
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 132, 40

Conread position: 127-288
Cow position:
Alignm length: 174
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 149-288
Cow position:
Alignm length: 150
Alignm identity: 121
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 105, 15

Conread position: 151-288
Cow position:
Alignm length: 148
Alignm identity: 118
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 103, 13

Conread position: 151-288
Cow position:
Alignm length: 148
Alignm identity: 121
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 103, 13

Conread position: 160-288
Cow position:
Alignm length: 139
Alignm identity: 108
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 94, 0

Conread position: 172-288
Cow position:
Alignm length: 127
Alignm identity: 104
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 84, 13

Show alignments to all cow chromosomes.