Cow genome map
| Conread name: | rtra21_d16r1.y1 |
| Conread position: | 72-275 |
| Cow position: | chr12:42562096-42561902 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 96-343 |
| Cow position: | chr12:15938093-15938329 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 103-339 |
| Cow position: | chr12:25280333-25280565 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 103-342 |
| Cow position: | chr12:24152513-24152269 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 185 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 15, 100 |
| Conread position: | 104-285 |
| Cow position: | chr12:4014253-4014442 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 105-316 |
| Cow position: | chr12:29731480-29731274 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 18, 87 |
| Conread position: | 105-352 |
| Cow position: | chr12:3623859-3623618 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 106-331 |
| Cow position: | chr12:18513756-18513983 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 14, 115 |
| Conread position: | 106-348 |
| Cow position: | chr12:17879136-17879373 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 13, 86 |
| Conread position: | 108-309 |
| Cow position: | chr12:26357202-26357404 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 110-334 |
| Cow position: | chr12:5635289-5635511 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 116-243 |
| Cow position: | chr12:29289944-29289818 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 116-284 |
| Cow position: | chr12:2835562-2835395 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 72, 97 |
| Conread position: | 116-297 |
| Cow position: | chr12:34877995-34877809 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 72, 114 |
| Conread position: | 116-307 |
| Cow position: | chr12:42698074-42698276 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 16, 178 |
| Conread position: | 116-323 |
| Cow position: | chr12:43855047-43854847 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 116-327 |
| Cow position: | chr12:24032645-24032445 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 116-332 |
| Cow position: | chr12:25343941-25343725 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 116-339 |
| Cow position: | chr12:45167851-45168082 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 61, 27 |
| Conread position: | 116-347 |
| Cow position: | chr12:42180970-42181200 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 76 |
| Conread position: | 116-348 |
| Cow position: | chr12:36790656-36790882 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 116-352 |
| Cow position: | chr12:15050468-15050693 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 102, 27 |
| Conread position: | 116-352 |
| Cow position: | chr12:15103434-15103191 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 165, 223 |
| Conread position: | 116-352 |
| Cow position: | chr12:31948268-31948040 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 144, 6 |
| Conread position: | 117-242 |
| Cow position: | chr12:27421608-27421487 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 117-252 |
| Cow position: | chr12:43930907-43930773 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 117-265 |
| Cow position: | chr12:44892365-44892218 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 117-267 |
| Cow position: | chr12:13995638-13995789 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 117-270 |
| Cow position: | chr12:17744709-17744858 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 117-275 |
| Cow position: | chr12:29762087-29762249 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 117-282 |
| Cow position: | chr12:46106945-46106785 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 117-288 |
| Cow position: | chr12:583348-583522 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 117-288 |
| Cow position: | chr12:44861101-44861272 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 117-292 |
| Cow position: | chr12:30042884-30042709 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 117-293 |
| Cow position: | chr12:19272534-19272706 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 117-294 |
| Cow position: | chr12:2964202-2964030 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 117-294 |
| Cow position: | chr12:22341415-22341228 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 117-295 |
| Cow position: | chr12:22323111-22323293 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 117-296 |
| Cow position: | chr12:35137077-35136897 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 175, 0 |
| Conread position: | 117-297 |
| Cow position: | chr12:3579640-3579466 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 117-297 |
| Cow position: | chr12:17108310-17108138 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 117-297 |
| Cow position: | chr12:19697550-19697373 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 148, 27 |
| Conread position: | 117-297 |
| Cow position: | chr12:20654325-20654501 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 37, 66 |
| Conread position: | 117-300 |
| Cow position: | chr12:24639784-24639611 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 117-301 |
| Cow position: | chr12:20355379-20355190 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 117-302 |
| Cow position: | chr12:4182133-4182313 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 117-303 |
| Cow position: | chr12:29180830-29180649 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 117-309 |
| Cow position: | chr12:14987956-14987761 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 160, 65 |
| Conread position: | 117-309 |
| Cow position: | chr12:24397009-24397196 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 117-309 |
| Cow position: | chr12:31841726-31841536 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 117-309 |
| Cow position: | chr12:34532916-34533107 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 164, 93 |
| Conread position: | 117-310 |
| Cow position: | chr12:29316306-29316496 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 121, 49 |
| Conread position: | 117-311 |
| Cow position: | chr12:38343707-38343516 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 117-312 |
| Cow position: | chr12:43551060-43551258 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 117-317 |
| Cow position: | chr12:25823072-25823268 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 117-317 |
| Cow position: | chr12:33129410-33129211 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 196, 76 |
| Conread position: | 117-321 |
| Cow position: | chr12:14986903-14986704 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 117-321 |
| Cow position: | chr12:48578991-48578798 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 117-322 |
| Cow position: | chr12:23106095-23105891 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 156 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 117-322 |
| Cow position: | chr12:23714828-23714628 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 201, 59 |
| Conread position: | 117-323 |
| Cow position: | chr12:9766725-9766924 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 117-323 |
| Cow position: | chr12:26147012-26147217 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 117-326 |
| Cow position: | chr12:2734755-2734958 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 117-326 |
| Cow position: | chr12:45039263-45039057 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 173, 74 |
| Conread position: | 117-327 |
| Cow position: | chr12:17031765-17031565 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 10, 50 |
| Conread position: | 117-327 |
| Cow position: | chr12:17252047-17252249 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 117-327 |
| Cow position: | chr12:20776773-20776972 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 102, 67 |
| Conread position: | 117-330 |
| Cow position: | chr12:9065715-9065500 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 117-331 |
| Cow position: | chr12:18123822-18123614 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 117-331 |
| Cow position: | chr12:19261351-19261140 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 117-331 |
| Cow position: | chr12:26576048-26575841 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 117-331 |
| Cow position: | chr12:42879855-42879639 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 166 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 117-331 |
| Cow position: | chr12:43974448-43974238 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 163, 0 |
| Conread position: | 117-332 |
| Cow position: | chr12:42602081-42602299 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 83, 110 |
| Conread position: | 117-334 |
| Cow position: | chr12:6206490-6206275 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 111, 140 |
| Conread position: | 117-334 |
| Cow position: | chr12:23446872-23446665 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 12, 21 |
| Conread position: | 117-334 |
| Cow position: | chr12:33976359-33976141 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 117-334 |
| Cow position: | chr12:35310526-35310743 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 89, 137 |
| Conread position: | 117-334 |
| Cow position: | chr12:38154912-38155129 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 163, 167 |
| Conread position: | 117-334 |
| Cow position: | chr12:40157872-40158080 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 117-336 |
| Cow position: | chr12:7110364-7110137 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 175 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 117-338 |
| Cow position: | chr12:31883502-31883278 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 82, 154 |
| Conread position: | 117-339 |
| Cow position: | chr12:9130059-9129846 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 117-339 |
| Cow position: | chr12:12637029-12637246 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 117-339 |
| Cow position: | chr12:14223139-14222919 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 117-339 |
| Cow position: | chr12:23836490-23836268 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 170 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 68, 27 |
| Conread position: | 117-339 |
| Cow position: | chr12:27563223-27563440 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 117-341 |
| Cow position: | chr12:3454853-3454613 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 83, 26 |
| Conread position: | 117-341 |
| Cow position: | chr12:30919590-30919360 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 117-341 |
| Cow position: | chr12:33949056-33948839 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 172 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 117-341 |
| Cow position: | chr12:38126365-38126589 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 210, 216 |
| Conread position: | 117-342 |
| Cow position: | chr12:1333373-1333165 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 117-342 |
| Cow position: | chr12:9482146-9482374 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 82, 115 |
| Conread position: | 117-342 |
| Cow position: | chr12:11587925-11587708 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 173 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 101, 26 |
| Conread position: | 117-343 |
| Cow position: | chr12:4769075-4768860 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 117-343 |
| Cow position: | chr12:6688041-6687826 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 14, 69 |
| Conread position: | 117-343 |
| Cow position: | chr12:10942450-10942220 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 117-343 |
| Cow position: | chr12:22284966-22285191 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 113, 15 |
| Conread position: | 117-343 |
| Cow position: | chr12:29966261-29966041 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 171 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 163, 0 |
| Conread position: | 117-343 |
| Cow position: | chr12:33851512-33851294 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 178 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 11, 16 |
| Conread position: | 117-344 |
| Cow position: | chr12:4954977-4954756 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 211, 65 |
| Conread position: | 117-345 |
| Cow position: | chr12:35240947-35241175 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 172 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 219, 104 |
| Conread position: | 117-347 |
| Cow position: | chr12:4720100-4719876 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 117-347 |
| Cow position: | chr12:7902649-7902876 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 181, 67 |
| Conread position: | 117-347 |
| Cow position: | chr12:26749794-26750025 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 213, 28 |
| Conread position: | 117-347 |
| Cow position: | chr12:38774089-38774313 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 175 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 224, 65 |
| Conread position: | 117-348 |
| Cow position: | chr12:18518828-18518600 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 172 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 219, 67 |
| Conread position: | 117-348 |
| Cow position: | chr12:19258432-19258206 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 100, 26 |
| Conread position: | 117-348 |
| Cow position: | chr12:37008554-37008773 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 180 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 117-349 |
| Cow position: | chr12:15496053-15495825 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 123, 47 |
| Conread position: | 117-350 |
| Cow position: | chr12:6241480-6241246 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 223 |
| Conread position: | 117-350 |
| Cow position: | chr12:42286120-42285896 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 117-351 |
| Cow position: | chr12:34161559-34161340 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 50, 22 |
| Conread position: | 117-352 |
| Cow position: | chr12:5554181-5554413 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 214, 67 |
| Conread position: | 117-352 |
| Cow position: | chr12:11660083-11659852 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 59, 136 |
| Conread position: | 117-352 |
| Cow position: | chr12:17882011-17881785 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 117-352 |
| Cow position: | chr12:25561522-25561294 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 117-352 |
| Cow position: | chr12:30806009-30805778 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 187 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 8, 46 |
| Conread position: | 117-352 |
| Cow position: | chr12:40910129-40910367 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 144, 65 |
| Conread position: | 117-352 |
| Cow position: | chr12:42749599-42749364 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 81, 119 |
| Conread position: | 117-353 |
| Cow position: | chr12:5135388-5135157 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 117-353 |
| Cow position: | chr12:26217671-26217902 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 195, 36 |
| Conread position: | 118-276 |
| Cow position: | chr12:6427054-6426896 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 41, 107 |
| Conread position: | 118-291 |
| Cow position: | chr12:28598426-28598248 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 61, 31 |
| Conread position: | 118-296 |
| Cow position: | chr12:6958374-6958199 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 102, 63 |
| Conread position: | 118-297 |
| Cow position: | chr12:4512296-4512471 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 118-322 |
| Cow position: | chr12:41684659-41684465 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 118-334 |
| Cow position: | chr12:3675359-3675585 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 66, 123 |
| Conread position: | 118-336 |
| Cow position: | chr12:13988529-13988309 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 118-336 |
| Cow position: | chr12:42282684-42282899 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 153, 72 |
| Conread position: | 118-339 |
| Cow position: | chr12:4596628-4596399 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 118-339 |
| Cow position: | chr12:6187954-6188177 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 118-339 |
| Cow position: | chr12:48415365-48415575 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 118-343 |
| Cow position: | chr12:45069229-45069454 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 38, 68 |
| Conread position: | 118-344 |
| Cow position: | chr12:4341580-4341812 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 118-345 |
| Cow position: | chr12:22485968-22485743 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 177 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 46, 178 |
| Conread position: | 118-348 |
| Cow position: | chr12:36544490-36544715 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 183, 59 |
| Conread position: | 118-349 |
| Cow position: | chr12:10833976-10834196 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 7, 38 |
| Conread position: | 119-260 |
| Cow position: | chr12:19056830-19056688 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 76, 56 |
| Conread position: | 119-292 |
| Cow position: | chr12:38679202-38679033 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 119-331 |
| Cow position: | chr12:44622514-44622300 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 66, 163 |
| Conread position: | 119-333 |
| Cow position: | chr12:13911422-13911638 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 130, 66 |
| Conread position: | 119-343 |
| Cow position: | chr12:40881769-40881977 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 174 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 120-274 |
| Cow position: | chr12:1952652-1952800 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 120-340 |
| Cow position: | chr12:15389223-15389007 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 120-348 |
| Cow position: | chr12:24181296-24181077 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 120-352 |
| Cow position: | chr12:21780317-21780087 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 120-352 |
| Cow position: | chr12:23939372-23939147 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 121-253 |
| Cow position: | chr12:25299513-25299382 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 97, 43 |
| Conread position: | 121-297 |
| Cow position: | chr12:11272677-11272847 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 121-316 |
| Cow position: | chr12:41989529-41989724 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 75, 104 |
| Conread position: | 121-321 |
| Cow position: | chr12:35469299-35469492 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 121-331 |
| Cow position: | chr12:24166797-24166999 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 121-341 |
| Cow position: | chr12:15163309-15163075 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 60, 188 |
| Conread position: | 121-341 |
| Cow position: | chr12:27802906-27803115 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 122-323 |
| Cow position: | chr12:3371397-3371589 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 123-350 |
| Cow position: | chr12:6410586-6410808 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 29 |
| Conread position: | 123-353 |
| Cow position: | chr12:32051670-32051434 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 49, 95 |
| Conread position: | 123-353 |
| Cow position: | chr12:42967145-42966923 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 225, 53 |
| Conread position: | 124-274 |
| Cow position: | chr12:36241238-36241384 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 124-295 |
| Cow position: | chr12:38552342-38552175 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 124-297 |
| Cow position: | chr12:30194842-30194680 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 124-308 |
| Cow position: | chr12:42944286-42944102 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 124-339 |
| Cow position: | chr12:29674990-29675201 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 116, 110 |
| Conread position: | 125-257 |
| Cow position: | chr12:38165393-38165522 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 106, 71 |
| Conread position: | 125-301 |
| Cow position: | chr12:17270685-17270509 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 86, 99 |
| Conread position: | 126-300 |
| Cow position: | chr12:29899273-29899447 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 126-312 |
| Cow position: | chr12:6480789-6480604 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 74, 60 |
| Conread position: | 132-308 |
| Cow position: | chr12:41220872-41221041 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 132-310 |
| Cow position: | chr12:16386314-16386491 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 132-327 |
| Cow position: | chr12:15122466-15122273 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 168, 53 |
| Conread position: | 132-341 |
| Cow position: | chr12:23574911-23574699 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 165 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 47, 210 |
| Conread position: | 135-352 |
| Cow position: | chr12:9514506-9514284 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 136-339 |
| Cow position: | chr12:22515601-22515795 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 136-342 |
| Cow position: | chr12:47267171-47267375 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 136-345 |
| Cow position: | chr12:5631747-5631948 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 136-352 |
| Cow position: | chr12:46714514-46714295 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 52, 104 |
| Conread position: | 137-316 |
| Cow position: | chr12:24146771-24146591 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 128, 72 |
| Conread position: | 137-352 |
| Cow position: | chr12:4866950-4866738 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 172 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 199, 40 |
| Conread position: | 141-351 |
| Cow position: | chr12:33323362-33323570 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 72, 49 |
| Conread position: | 143-323 |
| Cow position: | chr12:11057001-11056828 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 114, 41 |
| Conread position: | 143-330 |
| Cow position: | chr12:45001936-45002121 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 143-335 |
| Cow position: | chr12:31532276-31532459 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 144-276 |
| Cow position: | chr12:38822801-38822676 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 144-295 |
| Cow position: | chr12:35124021-35123871 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 67, 80 |
| Conread position: | 144-298 |
| Cow position: | chr12:11106449-11106603 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 144-309 |
| Cow position: | chr12:20356677-20356839 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 144-327 |
| Cow position: | chr12:37770995-37770826 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 144-334 |
| Cow position: | chr12:23916968-23916788 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 144-339 |
| Cow position: | chr12:43782840-43783038 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 78, 20 |
| Conread position: | 144-351 |
| Cow position: | chr12:30661820-30662024 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 146-339 |
| Cow position: | chr12:17269928-17269739 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 149-268 |
| Cow position: | chr12:15509638-15509754 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 149-278 |
| Cow position: | chr12:26945712-26945837 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 149-294 |
| Cow position: | chr12:21819556-21819413 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 135, 16 |
| Conread position: | 149-323 |
| Cow position: | chr12:22859583-22859420 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 149-352 |
| Cow position: | chr12:41159714-41159514 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 162 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 151-278 |
| Cow position: | chr12:43644045-43644169 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 151-278 |
| Cow position: | chr12:43645376-43645500 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 156-352 |
| Cow position: | chr12:20479220-20479405 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 166-327 |
| Cow position: | chr12:25355646-25355805 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 167-320 |
| Cow position: | chr12:3586228-3586074 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 167-341 |
| Cow position: | chr12:5609403-5609572 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 68, 121 |
| Conread position: | 167-352 |
| Cow position: | chr12:9914900-9914713 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 171-332 |
| Cow position: | chr12:24186386-24186539 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 151, 104 |
| Conread position: | 175-339 |
| Cow position: | chr12:44901359-44901198 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 176-334 |
| Cow position: | chr12:36994016-36994174 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 176-352 |
| Cow position: | chr12:29969683-29969503 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 177-342 |
| Cow position: | chr12:1767008-1766846 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 177-352 |
| Cow position: | chr12:3950245-3950418 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 26, 160 |
| Conread position: | 178-260 |
| Cow position: | chr12:34459758-34459676 (view UCSC Genome Browser custom track) |
| Alignm length: | 83 |
| Alignm identity: | 73 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 178-320 |
| Cow position: | chr12:9413711-9413852 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 178-352 |
| Cow position: | chr12:7000507-7000680 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 166, 62 |
| Conread position: | 178-353 |
| Cow position: | chr12:45014779-45014603 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 41, 23 |
| Conread position: | 179-343 |
| Cow position: | chr12:14131673-14131834 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 181-334 |
| Cow position: | chr12:15173918-15173765 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 181-339 |
| Cow position: | chr12:44916196-44916042 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 181-341 |
| Cow position: | chr12:27037355-27037515 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 181-352 |
| Cow position: | chr12:17774889-17774718 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-317 |
| Cow position: | chr12:42143250-42143119 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 185-333 |
| Cow position: | chr12:3197359-3197212 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 185-333 |
| Cow position: | chr12:32419283-32419428 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 19, 40 |
| Conread position: | 185-349 |
| Cow position: | chr12:29770488-29770645 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 186-309 |
| Cow position: | chr12:28651203-28651080 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 187-334 |
| Cow position: | chr12:1701716-1701863 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 187-344 |
| Cow position: | chr12:46463981-46464135 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 188-350 |
| Cow position: | chr12:44595722-44595884 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 32, 23 |
| Conread position: | 188-352 |
| Cow position: | chr12:31429483-31429646 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 148, 114 |
| Conread position: | 190-341 |
| Cow position: | chr12:41215800-41215945 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 190-344 |
| Cow position: | chr12:4793283-4793129 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 191-331 |
| Cow position: | chr12:45092531-45092391 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 191-333 |
| Cow position: | chr12:12912852-12912994 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 45, 95 |
| Conread position: | 191-333 |
| Cow position: | chr12:34195625-34195764 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 191-349 |
| Cow position: | chr12:44517653-44517810 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 155, 0 |
| Conread position: | 191-352 |
| Cow position: | chr12:6210072-6210233 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 17, 148 |
| Conread position: | 192-327 |
| Cow position: | chr12:24116278-24116413 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 15, 34 |
| Conread position: | 192-334 |
| Cow position: | chr12:31517088-31517229 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 192-340 |
| Cow position: | chr12:12304466-12304323 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 6, 90 |
| Conread position: | 193-331 |
| Cow position: | chr12:19691151-19691286 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 193-338 |
| Cow position: | chr12:45090269-45090412 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 194-331 |
| Cow position: | chr12:39465660-39465524 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 194-340 |
| Cow position: | chr12:15700162-15700014 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 70, 53 |
| Conread position: | 194-344 |
| Cow position: | chr12:24023720-24023870 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 195-343 |
| Cow position: | chr12:30210564-30210416 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 196-349 |
| Cow position: | chr12:18943578-18943731 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 196-351 |
| Cow position: | chr12:47804235-47804081 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 145, 5 |
| Conread position: | 196-353 |
| Cow position: | chr12:30438317-30438164 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 201-353 |
| Cow position: | chr12:28582434-28582581 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 204-339 |
| Cow position: | chr12:23855904-23855776 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 212-352 |
| Cow position: | chr12:18963864-18964003 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 214-333 |
| Cow position: | chr12:43691354-43691473 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 218-352 |
| Cow position: | chr12:25452389-25452523 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.