Cow genome map

Conread name: rtra21_d16r1.y1

Conread position: 60-352
Cow position: chr5:69338097-69337808 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 204
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 12, 107

Conread position: 84-275
Cow position: chr5:54712813-54713000 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 29, 20

Conread position: 85-320
Cow position: chr5:41885165-41884940 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 170
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 31, 0

Conread position: 94-327
Cow position: chr5:74643437-74643662 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 162
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 25, 94

Conread position: 95-311
Cow position: chr5:53779400-53779183 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 28, 89

Conread position: 96-263
Cow position: chr5:31317240-31317077 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 132, 18

Conread position: 96-331
Cow position: chr5:30276930-30276699 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 177
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 22, 98

Conread position: 96-350
Cow position: chr5:35228901-35229148 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 182
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 22, 46

Conread position: 102-296
Cow position: chr5:5017607-5017420 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 119, 41

Conread position: 102-297
Cow position: chr5:39815261-39815458 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 142
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 85, 12

Conread position: 102-339
Cow position: chr5:39447289-39447534 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 103-312
Cow position: chr5:16668927-16668725 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 161
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 11, 0

Conread position: 103-343
Cow position: chr5:22608874-22608641 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 171
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 115, 40

Conread position: 104-281
Cow position: chr5:57447430-57447607 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 114, 118

Conread position: 104-339
Cow position: chr5:49474320-49474544 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 175
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 96, 0

Conread position: 106-234
Cow position: chr5:74690019-74690148 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 12, 0

Conread position: 106-249
Cow position: chr5:25447120-25446976 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 106
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 106-267
Cow position: chr5:19626808-19626651 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 79, 0

Conread position: 106-278
Cow position: chr5:718381-718212 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 123
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 87, 0

Conread position: 106-310
Cow position: chr5:53980519-53980724 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 149
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 20, 0

Conread position: 106-322
Cow position: chr5:66659747-66659527 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 153
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 12, 0

Conread position: 106-327
Cow position: chr5:17105078-17104866 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 163
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 12, 81

Conread position: 106-334
Cow position: chr5:30845339-30845119 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 173
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 17, 77

Conread position: 106-337
Cow position: chr5:16893546-16893768 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 171
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 74, 0

Conread position: 106-339
Cow position: chr5:53935322-53935546 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 161
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 78, 0

Conread position: 106-348
Cow position: chr5:40109716-40109485 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 171
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 77, 0

Conread position: 106-352
Cow position: chr5:49440622-49440883 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 187
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 71, 10

Conread position: 106-353
Cow position: chr5:12434769-12434534 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 174
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 13, 77

Conread position: 107-316
Cow position: chr5:59336005-59335793 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 11, 0

Conread position: 107-318
Cow position: chr5:60523958-60523757 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 162
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 76, 0

Conread position: 107-327
Cow position: chr5:14314748-14314541 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 11, 77

Conread position: 107-331
Cow position: chr5:30253972-30253750 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 172
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 11, 71

Conread position: 107-334
Cow position: chr5:55756182-55756414 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 111, 115

Conread position: 107-340
Cow position: chr5:44810006-44810239 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 158
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 107-341
Cow position: chr5:7012618-7012848 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 170
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 111, 115

Conread position: 108-284
Cow position: chr5:9486852-9487029 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 124
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 108-327
Cow position: chr5:56548796-56548585 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 154
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 76, 0

Conread position: 109-322
Cow position: chr5:32338731-32338948 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 155
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 9, 24

Conread position: 109-343
Cow position: chr5:18062081-18062322 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 181
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 79, 0

Conread position: 109-352
Cow position: chr5:20779171-20779409 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 183
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 235, 10

Conread position: 109-352
Cow position: chr5:25598057-25597824 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 176
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 109, 23

Conread position: 110-268
Cow position: chr5:54554957-54555118 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 108, 112

Conread position: 110-292
Cow position: chr5:65745539-65745717 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 141
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 10, 75

Conread position: 110-312
Cow position: chr5:44734499-44734697 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 159
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 74, 0

Conread position: 110-352
Cow position: chr5:16214909-16214677 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 168
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 70, 0

Conread position: 110-352
Cow position: chr5:65776149-65776396 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 179
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 71, 53

Conread position: 114-339
Cow position: chr5:20128277-20128053 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 158
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 9, 0

Conread position: 115-339
Cow position: chr5:2468991-2469206 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 160
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 8, 0

Conread position: 116-264
Cow position: chr5:34639346-34639198 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 116-270
Cow position: chr5:24108836-24108990 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 122
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 116-285
Cow position: chr5:38420830-38420656 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 63, 157

Conread position: 116-288
Cow position: chr5:34918565-34918398 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 137
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 74, 0

Conread position: 116-298
Cow position: chr5:34116211-34116018 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 71, 154

Conread position: 116-302
Cow position: chr5:29829666-29829851 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 80, 6

Conread position: 116-320
Cow position: chr5:35145557-35145348 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 162
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 69, 139

Conread position: 116-327
Cow position: chr5:36143200-36143000 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 148
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 116-331
Cow position: chr5:30628931-30629150 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 169
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 69, 109

Conread position: 116-333
Cow position: chr5:53947121-53946904 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 152
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 116-334
Cow position: chr5:61456069-61455854 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 161
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 23, 70

Conread position: 116-339
Cow position: chr5:41935433-41935650 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 162
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 141, 119

Conread position: 116-341
Cow position: chr5:73167792-73168012 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 68, 0

Conread position: 116-342
Cow position: chr5:33273919-33273692 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 166

Conread position: 116-343
Cow position: chr5:25035032-25035257 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 177
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 65, 166

Conread position: 116-344
Cow position: chr5:60209924-60210147 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 151
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 116-345
Cow position: chr5:28814724-28814952 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 148
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 178, 0

Conread position: 116-347
Cow position: chr5:20288036-20288270 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 177
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 103, 0

Conread position: 116-350
Cow position: chr5:35208484-35208254 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 164
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 7, 0

Conread position: 116-352
Cow position: chr5:57101304-57101538 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 184
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 214, 69

Conread position: 117-254
Cow position: chr5:74050045-74049910 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 74, 0

Conread position: 117-254
Cow position: chr5:75711916-75712052 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 92, 0

Conread position: 117-261
Cow position: chr5:57585097-57584955 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 106
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 117-268
Cow position: chr5:15770231-15770384 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 87, 0

Conread position: 117-271
Cow position: chr5:18579110-18578963 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 104, 67

Conread position: 117-277
Cow position: chr5:26149256-26149097 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 117-278
Cow position: chr5:5030660-5030505 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 49, 0

Conread position: 117-278
Cow position: chr5:31975753-31975581 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 60, 109

Conread position: 117-278
Cow position: chr5:35235466-35235627 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 117-278
Cow position: chr5:46479026-46479180 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 117-278
Cow position: chr5:63763886-63763727 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 84, 0

Conread position: 117-279
Cow position: chr5:43611920-43611759 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 117-280
Cow position: chr5:4824374-4824208 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 83, 91

Conread position: 117-282
Cow position: chr5:14419796-14419950 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 117-284
Cow position: chr5:21339039-21339213 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 56, 0

Conread position: 117-285
Cow position: chr5:29895392-29895226 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 65, 0

Conread position: 117-285
Cow position: chr5:60100683-60100525 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 63, 0

Conread position: 117-286
Cow position: chr5:41530715-41530886 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 81, 109

Conread position: 117-289
Cow position: chr5:29060718-29060887 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 150, 73

Conread position: 117-289
Cow position: chr5:60207926-60207759 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 134
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 65, 0

Conread position: 117-290
Cow position: chr5:67340102-67339934 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 122
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 74, 0

Conread position: 117-292
Cow position: chr5:14168067-14167892 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 64, 146

Conread position: 117-293
Cow position: chr5:20345759-20345584 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 94, 110

Conread position: 117-293
Cow position: chr5:30492570-30492746 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 82, 172

Conread position: 117-294
Cow position: chr5:8736056-8736233 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 94, 79

Conread position: 117-294
Cow position: chr5:41226783-41226960 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 124
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 94, 107

Conread position: 117-294
Cow position: chr5:45854722-45854537 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 79, 0

Conread position: 117-294
Cow position: chr5:57086841-57087017 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 84, 0

Conread position: 117-295
Cow position: chr5:19294298-19294481 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 141
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 78, 0

Conread position: 117-296
Cow position: chr5:31648636-31648464 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 98, 67

Conread position: 117-296
Cow position: chr5:41009789-41009961 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 173, 103

Conread position: 117-296
Cow position: chr5:51012221-51012043 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 122, 103

Conread position: 117-297
Cow position: chr5:3817466-3817644 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 79, 0

Conread position: 117-297
Cow position: chr5:15991424-15991596 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 67, 0

Conread position: 117-297
Cow position: chr5:25495130-25495315 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 74, 27

Conread position: 117-297
Cow position: chr5:30221556-30221735 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 124
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 106, 0

Conread position: 117-301
Cow position: chr5:24915304-24915488 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 117-301
Cow position: chr5:35989983-35989802 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 129
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 74, 94

Conread position: 117-301
Cow position: chr5:41736403-41736221 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 128
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 107, 26

Conread position: 117-301
Cow position: chr5:46710804-46710621 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 129
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 79, 107

Conread position: 117-301
Cow position: chr5:46715704-46715521 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 79, 107

Conread position: 117-302
Cow position: chr5:32975984-32975795 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 148
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 68, 26

Conread position: 117-304
Cow position: chr5:57497205-57497388 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 74, 0

Conread position: 117-305
Cow position: chr5:22957624-22957445 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 65, 0

Conread position: 117-305
Cow position: chr5:29172212-29172022 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 23, 105

Conread position: 117-307
Cow position: chr5:7675937-7676122 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 135
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 79, 0

Conread position: 117-307
Cow position: chr5:12562539-12562727 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 146
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 148, 67

Conread position: 117-307
Cow position: chr5:17987672-17987860 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 131, 0

Conread position: 117-307
Cow position: chr5:58487594-58487412 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 67, 0

Conread position: 117-309
Cow position: chr5:50578943-50579135 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 134
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 102, 67

Conread position: 117-311
Cow position: chr5:1693871-1694059 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 77, 0

Conread position: 117-312
Cow position: chr5:3677949-3677751 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 155
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 65, 169

Conread position: 117-312
Cow position: chr5:6086120-6086315 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 136
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 174, 85

Conread position: 117-312
Cow position: chr5:16185601-16185406 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 117-312
Cow position: chr5:57399030-57399224 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 168, 0

Conread position: 117-312
Cow position: chr5:57744689-57744896 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 68, 49

Conread position: 117-313
Cow position: chr5:49821652-49821455 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 157
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 83, 0

Conread position: 117-314
Cow position: chr5:34288033-34288224 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 153
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 95, 67

Conread position: 117-314
Cow position: chr5:49207108-49207297 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 68, 0

Conread position: 117-316
Cow position: chr5:24464959-24464768 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 170, 47

Conread position: 117-317
Cow position: chr5:37842058-37842256 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 152
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 67, 0

Conread position: 117-317
Cow position: chr5:51289380-51289568 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 148
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 58, 0

Conread position: 117-317
Cow position: chr5:60595892-60596108 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 58, 175

Conread position: 117-317
Cow position: chr5:69765813-69766004 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 150
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 83, 0

Conread position: 117-318
Cow position: chr5:12902140-12901939 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 117-318
Cow position: chr5:35190327-35190132 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 156
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 68, 0

Conread position: 117-320
Cow position: chr5:36038784-36038981 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 159
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 142, 43

Conread position: 117-321
Cow position: chr5:22667291-22667091 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 143
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 65, 0

Conread position: 117-323
Cow position: chr5:9893904-9894105 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 37, 0

Conread position: 117-325
Cow position: chr5:54312820-54312616 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 165
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 9, 0

Conread position: 117-326
Cow position: chr5:3582776-3582574 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 157
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 11, 16

Conread position: 117-327
Cow position: chr5:12300132-12299924 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 153
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 9, 49

Conread position: 117-327
Cow position: chr5:19278482-19278693 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 162
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 83, 99

Conread position: 117-327
Cow position: chr5:21829085-21828881 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 156
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 26, 0

Conread position: 117-327
Cow position: chr5:26548922-26549127 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 164
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 67, 0

Conread position: 117-327
Cow position: chr5:46540839-46541042 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 152
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 68, 0

Conread position: 117-327
Cow position: chr5:51298494-51298699 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 155
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 74, 0

Conread position: 117-327
Cow position: chr5:66257855-66257652 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 152
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 76, 0

Conread position: 117-327
Cow position: chr5:72895907-72895699 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 147
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 84, 0

Conread position: 117-328
Cow position: chr5:19079464-19079264 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 156
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 56, 0

Conread position: 117-331
Cow position: chr5:2240768-2240980 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 159
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 181, 0

Conread position: 117-331
Cow position: chr5:11229450-11229663 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 160
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 76, 43

Conread position: 117-331
Cow position: chr5:22242553-22242763 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 161
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 146, 49

Conread position: 117-331
Cow position: chr5:38833335-38833132 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 158
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 24, 0

Conread position: 117-331
Cow position: chr5:39036003-39035789 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 164
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 62, 110

Conread position: 117-332
Cow position: chr5:5016644-5016437 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 163
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 10, 69

Conread position: 117-334
Cow position: chr5:2309337-2309550 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 163
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 74, 0

Conread position: 117-334
Cow position: chr5:7057176-7057395 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 79, 146

Conread position: 117-334
Cow position: chr5:32394823-32394605 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 153
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 55, 75

Conread position: 117-334
Cow position: chr5:44993818-44994034 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 8, 171

Conread position: 117-334
Cow position: chr5:50723269-50723052 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 117-334
Cow position: chr5:55068921-55068712 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 167
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 19, 0

Conread position: 117-334
Cow position: chr5:61914792-61914569 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 164
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 82, 0

Conread position: 117-335
Cow position: chr5:56549589-56549369 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 150
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 94, 107

Conread position: 117-335
Cow position: chr5:71768287-71768490 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 117-337
Cow position: chr5:44847806-44848021 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 167
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 188, 83

Conread position: 117-338
Cow position: chr5:1247484-1247268 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 155
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 79, 25

Conread position: 117-338
Cow position: chr5:40241955-40241747 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 154
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 217, 67

Conread position: 117-339
Cow position: chr5:58709-58933 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 156
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 68, 143

Conread position: 117-339
Cow position: chr5:6520227-6520012 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 164
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 165, 67

Conread position: 117-339
Cow position: chr5:30487448-30487243 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 165
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 81, 117

Conread position: 117-339
Cow position: chr5:39937337-39937117 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 163
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 101, 15

Conread position: 117-339
Cow position: chr5:41165303-41165089 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 173
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 68, 0

Conread position: 117-339
Cow position: chr5:44163152-44163368 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 165
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 176, 45

Conread position: 117-339
Cow position: chr5:51053427-51053651 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 170
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 163, 73

Conread position: 117-339
Cow position: chr5:56014943-56014732 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 62, 0

Conread position: 117-339
Cow position: chr5:61049555-61049333 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 117-339
Cow position: chr5:67634287-67634516 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 161
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 84, 0

Conread position: 117-339
Cow position: chr5:68537443-68537664 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 160
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 84, 166

Conread position: 117-340
Cow position: chr5:18574403-18574175 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 170
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 71, 158

Conread position: 117-341
Cow position: chr5:35246886-35247110 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 172
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 20, 211

Conread position: 117-341
Cow position: chr5:40889074-40889298 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 149
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 117-341
Cow position: chr5:47870833-47871040 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 158
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 117-341
Cow position: chr5:56028324-56028540 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 166
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 67, 0

Conread position: 117-341
Cow position: chr5:57062307-57062530 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 166
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 44, 105

Conread position: 117-341
Cow position: chr5:59384465-59384688 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 157
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 49, 39

Conread position: 117-341
Cow position: chr5:60514804-60515029 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 169
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 23, 138

Conread position: 117-341
Cow position: chr5:64175909-64176129 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 165
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 216, 67

Conread position: 117-342
Cow position: chr5:5257066-5257290 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 160
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 76, 0

Conread position: 117-342
Cow position: chr5:43922950-43923154 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 164
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 117-343
Cow position: chr5:33834261-33834039 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 157
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 93, 0

Conread position: 117-343
Cow position: chr5:34347512-34347732 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 163
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 219, 147

Conread position: 117-343
Cow position: chr5:43846157-43846377 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 171
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 101, 42

Conread position: 117-343
Cow position: chr5:43858197-43858422 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 170
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 153, 0

Conread position: 117-343
Cow position: chr5:46681502-46681726 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 177, 19

Conread position: 117-343
Cow position: chr5:47756993-47756774 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 160
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 101, 65

Conread position: 117-343
Cow position: chr5:54311577-54311333 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 179
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 64, 0

Conread position: 117-343
Cow position: chr5:56860664-56860445 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 177
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 65, 58

Conread position: 117-344
Cow position: chr5:45405268-45405033 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 158
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 20, 108

Conread position: 117-344
Cow position: chr5:47602029-47601808 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 173
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 47, 0

Conread position: 117-344
Cow position: chr5:56613342-56613568 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 169
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 96, 0

Conread position: 117-346
Cow position: chr5:72045456-72045681 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 178
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 219, 14

Conread position: 117-347
Cow position: chr5:4267881-4267664 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 176
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 52, 0

Conread position: 117-347
Cow position: chr5:12557066-12557296 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 176
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 151, 81

Conread position: 117-347
Cow position: chr5:26262464-26262680 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 171
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 73, 0

Conread position: 117-347
Cow position: chr5:45845469-45845695 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 176
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 123, 68

Conread position: 117-348
Cow position: chr5:12322590-12322812 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 164
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 102, 62

Conread position: 117-349
Cow position: chr5:20994868-20995102 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 170
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 159, 26

Conread position: 117-350
Cow position: chr5:46022837-46023074 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 182
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 68, 36

Conread position: 117-350
Cow position: chr5:46129446-46129678 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 181
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 68, 36

Conread position: 117-350
Cow position: chr5:50101157-50101388 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 175
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 155, 67

Conread position: 117-350
Cow position: chr5:52164952-52165188 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 178
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 60, 125

Conread position: 117-350
Cow position: chr5:63627319-63627536 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 173
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 13, 0

Conread position: 117-351
Cow position: chr5:4280665-4280436 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 70

Conread position: 117-352
Cow position: chr5:5856081-5855847 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 175
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 218, 0

Conread position: 117-352
Cow position: chr5:11667963-11668197 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 63

Conread position: 117-352
Cow position: chr5:14550361-14550594 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 165
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 221, 0

Conread position: 117-352
Cow position: chr5:16937813-16938034 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 172
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 68, 0

Conread position: 117-352
Cow position: chr5:19752522-19752293 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 185
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 224, 62

Conread position: 117-352
Cow position: chr5:24996000-24996235 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 174
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 90, 46

Conread position: 117-352
Cow position: chr5:30247304-30247533 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 171
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 116, 0

Conread position: 117-352
Cow position: chr5:30303102-30302884 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 175
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 214, 101

Conread position: 117-352
Cow position: chr5:35969761-35969521 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 190

Conread position: 117-352
Cow position: chr5:36868958-36868723 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 175
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 216, 117

Conread position: 117-352
Cow position: chr5:44446654-44446877 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 171
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 205, 66

Conread position: 117-352
Cow position: chr5:44796515-44796745 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 181
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 219, 49

Conread position: 117-352
Cow position: chr5:47316754-47316985 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 161
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 72, 26

Conread position: 117-352
Cow position: chr5:49920146-49919911 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 159
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 194, 8

Conread position: 117-352
Cow position: chr5:50858157-50857924 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 156
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 78, 107

Conread position: 117-352
Cow position: chr5:52001403-52001633 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 173
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 26, 0

Conread position: 117-352
Cow position: chr5:54875472-54875712 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 166
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 154, 103

Conread position: 117-352
Cow position: chr5:66972651-66972415 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 176
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 80, 42

Conread position: 117-353
Cow position: chr5:35459075-35459309 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 166
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 144, 65

Conread position: 117-353
Cow position: chr5:69383472-69383242 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 118-263
Cow position: chr5:64142434-64142578 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 118-275
Cow position: chr5:6245445-6245598 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 73, 0

Conread position: 118-288
Cow position: chr5:37253643-37253481 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 72, 0

Conread position: 118-298
Cow position: chr5:54340986-54340807 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 159, 13

Conread position: 118-300
Cow position: chr5:6876745-6876928 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 145
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 130, 80

Conread position: 118-308
Cow position: chr5:20127127-20126935 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 145, 21

Conread position: 118-309
Cow position: chr5:4347473-4347673 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 57, 0

Conread position: 118-309
Cow position: chr5:34787792-34787603 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 164, 66

Conread position: 118-311
Cow position: chr5:57302993-57302797 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 157
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 70, 186

Conread position: 118-332
Cow position: chr5:63234602-63234816 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 171
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 7, 185

Conread position: 118-333
Cow position: chr5:60948352-60948140 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 167
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 73, 0

Conread position: 118-341
Cow position: chr5:42064427-42064205 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 218, 0

Conread position: 118-341
Cow position: chr5:64140758-64140534 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 164
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 169, 72

Conread position: 118-343
Cow position: chr5:65552501-65552711 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 25, 0

Conread position: 118-346
Cow position: chr5:55177100-55176888 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 165
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 223, 36

Conread position: 118-351
Cow position: chr5:55956130-55955896 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 181
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 130, 74

Conread position: 118-351
Cow position: chr5:60175706-60175469 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 164
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 82, 13

Conread position: 118-352
Cow position: chr5:61875774-61875530 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 188
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 65, 195

Conread position: 118-352
Cow position: chr5:67932246-67932479 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 174
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 59, 192

Conread position: 119-285
Cow position: chr5:29599333-29599491 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 129
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 66, 0

Conread position: 119-327
Cow position: chr5:60598968-60599191 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 163
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 65, 0

Conread position: 119-338
Cow position: chr5:50824802-50824594 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 159
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 66, 0

Conread position: 120-282
Cow position: chr5:75116352-75116514 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 117
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 80, 156

Conread position: 120-288
Cow position: chr5:58401783-58401621 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 63, 0

Conread position: 120-291
Cow position: chr5:58452611-58452428 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 57, 46

Conread position: 120-293
Cow position: chr5:64843747-64843924 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 141
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 76, 0

Conread position: 120-321
Cow position: chr5:47743839-47743647 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 61, 0

Conread position: 120-347
Cow position: chr5:34914836-34915060 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 170
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 27, 66

Conread position: 120-352
Cow position: chr5:52108040-52108279 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 179
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 60, 125

Conread position: 120-352
Cow position: chr5:57156082-57156327 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 179
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 59, 114

Conread position: 121-261
Cow position: chr5:4728286-4728153 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 121-262
Cow position: chr5:52778347-52778488 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 105
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 121-290
Cow position: chr5:19052574-19052742 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 59, 0

Conread position: 121-292
Cow position: chr5:65140517-65140344 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 149, 102

Conread position: 121-292
Cow position: chr5:69682130-69682301 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 120
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 121-300
Cow position: chr5:48061891-48062077 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 13, 0

Conread position: 121-301
Cow position: chr5:59395881-59395701 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 125
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 90, 103

Conread position: 121-307
Cow position: chr5:15077417-15077602 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 132
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 19, 26

Conread position: 121-308
Cow position: chr5:40122391-40122578 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 147
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 121-339
Cow position: chr5:30562145-30561933 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 97, 59

Conread position: 121-352
Cow position: chr5:2827592-2827363 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 174
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 71, 22

Conread position: 121-352
Cow position: chr5:18289335-18289118 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 174
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 215, 63

Conread position: 122-301
Cow position: chr5:51233808-51233980 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 22, 0

Conread position: 123-294
Cow position: chr5:20667565-20667727 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 123-312
Cow position: chr5:13270800-13270989 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 90, 160

Conread position: 123-312
Cow position: chr5:62341245-62341056 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 136
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 113, 20

Conread position: 123-315
Cow position: chr5:17554820-17555007 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 157, 65

Conread position: 123-317
Cow position: chr5:57526712-57526901 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 121, 0

Conread position: 123-328
Cow position: chr5:12673265-12673461 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 61, 0

Conread position: 123-333
Cow position: chr5:50713535-50713757 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 163
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 58, 0

Conread position: 123-352
Cow position: chr5:66582185-66581951 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 165
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 75, 213

Conread position: 124-309
Cow position: chr5:50087982-50087800 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 96, 21

Conread position: 124-312
Cow position: chr5:54753035-54753224 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 152, 0

Conread position: 131-309
Cow position: chr5:51125811-51125978 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 140
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 45, 0

Conread position: 131-322
Cow position: chr5:54751015-54750825 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 58, 0

Conread position: 132-317
Cow position: chr5:57994674-57994860 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 134
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 140, 14

Conread position: 132-321
Cow position: chr5:60016370-60016187 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 65, 0

Conread position: 132-327
Cow position: chr5:46704094-46704286 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 135
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 132-340
Cow position: chr5:41713494-41713299 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 156
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 118, 43

Conread position: 132-341
Cow position: chr5:16939386-16939595 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 156
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 132-347
Cow position: chr5:49501612-49501830 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 171
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 59, 210

Conread position: 132-347
Cow position: chr5:64523658-64523870 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 49, 0

Conread position: 132-350
Cow position: chr5:46079933-46080152 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 171
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 53, 21

Conread position: 132-350
Cow position: chr5:57419590-57419804 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 56, 0

Conread position: 132-352
Cow position: chr5:29352926-29353136 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 165
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 43, 0

Conread position: 133-327
Cow position: chr5:55942172-55942366 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 133-329
Cow position: chr5:44028100-44028292 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 52, 80

Conread position: 133-343
Cow position: chr5:50942957-50943161 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 162
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 88, 51

Conread position: 136-292
Cow position: chr5:32935947-32935792 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 117, 0

Conread position: 136-296
Cow position: chr5:30035271-30035111 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 136-308
Cow position: chr5:62572733-62572564 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 136-310
Cow position: chr5:41983926-41983754 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 54, 148

Conread position: 136-329
Cow position: chr5:64026813-64027008 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 155
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 43, 0

Conread position: 136-331
Cow position: chr5:44196728-44196920 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 46, 0

Conread position: 136-341
Cow position: chr5:35513423-35513214 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 157
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 44, 110

Conread position: 136-349
Cow position: chr5:11769474-11769264 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 159
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 66, 99

Conread position: 136-352
Cow position: chr5:55795768-55795978 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 169
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 142, 49

Conread position: 137-339
Cow position: chr5:57686540-57686736 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 154
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 48, 0

Conread position: 138-347
Cow position: chr5:17383954-17384156 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 155
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 192, 138

Conread position: 138-348
Cow position: chr5:45225620-45225820 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 158
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 102, 46

Conread position: 139-344
Cow position: chr5:54350172-54350365 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 143-331
Cow position: chr5:28302556-28302736 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 150, 41

Conread position: 144-278
Cow position: chr5:4981642-4981512 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 144-297
Cow position: chr5:62011879-62011726 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 144-303
Cow position: chr5:57556226-57556066 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 17, 66

Conread position: 144-309
Cow position: chr5:56434077-56433911 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 45, 58

Conread position: 144-312
Cow position: chr5:20882419-20882596 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 144-319
Cow position: chr5:46063690-46063518 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 123
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 144-326
Cow position: chr5:69461529-69461347 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 116, 41

Conread position: 144-327
Cow position: chr5:11427039-11427220 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 74, 80

Conread position: 144-331
Cow position: chr5:58519220-58519407 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 144-341
Cow position: chr5:57074138-57074332 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 150
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 41, 0

Conread position: 144-352
Cow position: chr5:61007261-61007053 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 140
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 52, 80

Conread position: 146-297
Cow position: chr5:60126888-60126733 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 123
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 54, 0

Conread position: 147-331
Cow position: chr5:66366700-66366519 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 44, 67

Conread position: 149-263
Cow position: chr5:29507400-29507512 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 149-278
Cow position: chr5:9352699-9352572 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 98
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 149-314
Cow position: chr5:695052-694890 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 136
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 62, 8

Conread position: 149-315
Cow position: chr5:21003497-21003339 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 133
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 81, 31

Conread position: 149-322
Cow position: chr5:27550763-27550941 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 121, 46

Conread position: 149-347
Cow position: chr5:42845404-42845600 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 69, 35

Conread position: 150-268
Cow position: chr5:49183338-49183222 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 150-278
Cow position: chr5:36722308-36722435 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 25, 36

Conread position: 150-350
Cow position: chr5:71495010-71494809 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 153
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 183, 27

Conread position: 151-278
Cow position: chr5:45436309-45436433 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 151-278
Cow position: chr5:59511285-59511410 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 151-331
Cow position: chr5:17602018-17602191 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 40, 0

Conread position: 151-352
Cow position: chr5:30805345-30805154 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 156
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 67, 32

Conread position: 151-352
Cow position: chr5:37646353-37646558 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 156
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 35, 98

Conread position: 154-339
Cow position: chr5:60183984-60183802 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 133, 31

Conread position: 156-297
Cow position: chr5:29979782-29979915 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 115
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 21, 0

Conread position: 166-330
Cow position: chr5:62378955-62378793 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 17, 115

Conread position: 171-301
Cow position: chr5:1946997-1946870 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 172-345
Cow position: chr5:30949747-30949919 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 136
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 166, 0

Conread position: 175-309
Cow position: chr5:53795192-53795056 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 178-327
Cow position: chr5:35647505-35647356 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 178-334
Cow position: chr5:56428154-56428305 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 81, 0

Conread position: 178-338
Cow position: chr5:51490085-51490243 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 131
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 24, 126

Conread position: 178-339
Cow position: chr5:21039818-21039977 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 128
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 14, 84

Conread position: 178-339
Cow position: chr5:57230175-57230337 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 126
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 25, 0

Conread position: 178-343
Cow position: chr5:34301078-34300915 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 75, 106

Conread position: 178-344
Cow position: chr5:55129505-55129339 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 131
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 178-344
Cow position: chr5:60908826-60908660 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 62, 55

Conread position: 178-347
Cow position: chr5:16205993-16206160 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 83, 126

Conread position: 178-347
Cow position: chr5:26476856-26477024 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 133, 0

Conread position: 178-349
Cow position: chr5:44726169-44726342 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 24, 50

Conread position: 179-288
Cow position: chr5:23866319-23866428 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 179-327
Cow position: chr5:23168665-23168813 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 179-342
Cow position: chr5:5847685-5847844 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 120, 0

Conread position: 180-339
Cow position: chr5:34528707-34528552 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 18, 65

Conread position: 180-339
Cow position: chr5:37808502-37808662 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 126
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 13, 0

Conread position: 180-343
Cow position: chr5:56338861-56339024 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 180-344
Cow position: chr5:41545733-41545897 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 119
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 181-318
Cow position: chr5:63059220-63059082 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 105, 0

Conread position: 181-321
Cow position: chr5:54436912-54436775 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 117, 0

Conread position: 181-334
Cow position: chr5:59627259-59627106 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 120
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 181-334
Cow position: chr5:63987286-63987439 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 125
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 24, 94

Conread position: 181-342
Cow position: chr5:4709993-4710153 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 133
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 102, 0

Conread position: 181-343
Cow position: chr5:4031827-4031992 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 87, 0

Conread position: 181-352
Cow position: chr5:58555296-58555122 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 136
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 155, 0

Conread position: 183-277
Cow position: chr5:54546509-54546602 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 80
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 184-342
Cow position: chr5:54086694-54086539 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 93, 0

Conread position: 185-315
Cow position: chr5:51490447-51490577 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 112
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 185-321
Cow position: chr5:43929581-43929716 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 111
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 114, 0

Conread position: 185-336
Cow position: chr5:9369116-9369267 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 122
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 185-338
Cow position: chr5:33155970-33155819 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 96

Conread position: 186-333
Cow position: chr5:26723600-26723455 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 9, 0

Conread position: 187-334
Cow position: chr5:67212513-67212367 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 128
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 33, 0

Conread position: 191-343
Cow position: chr5:24946389-24946237 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 90, 20

Conread position: 191-352
Cow position: chr5:49685128-49685282 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 26, 0

Conread position: 192-341
Cow position: chr5:45126800-45126650 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 192-346
Cow position: chr5:56877630-56877474 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 45, 90

Conread position: 192-352
Cow position: chr5:63832076-63831915 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 133, 141

Conread position: 193-344
Cow position: chr5:69731647-69731502 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 87, 0

Conread position: 194-331
Cow position: chr5:22446057-22445919 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 53, 91

Conread position: 194-339
Cow position: chr5:72564910-72564765 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 194-349
Cow position: chr5:15364028-15363872 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 142, 0

Conread position: 196-337
Cow position: chr5:29771672-29771531 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 114
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 198-334
Cow position: chr5:6528827-6528689 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 199-342
Cow position: chr5:56153757-56153615 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 6, 67

Conread position: 200-339
Cow position: chr5:56517244-56517105 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 90, 75

Conread position: 205-352
Cow position: chr5:52000353-52000210 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 136, 50

Conread position: 207-347
Cow position: chr5:1461222-1461083 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 131, 0

Conread position: 218-342
Cow position: chr5:55350788-55350914 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 221-352
Cow position: chr5:32696704-32696835 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 115, 34

Conread position: 222-348
Cow position: chr5:52644962-52645087 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 113, 0

Show alignments to all cow chromosomes.