Cow genome map
| Conread name: | rtra22_d15r1.y1 |
| Conread position: | 119-548 |
| Cow position: | chr12:15429363-15429775 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 274 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 53, 23 |
| Conread position: | 134-493 |
| Cow position: | chr12:16056630-16056985 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 134-548 |
| Cow position: | chr12:38774019-38774420 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 271 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 384, 146 |
| Conread position: | 139-489 |
| Cow position: | chr12:38126302-38126648 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 53, 13 |
| Conread position: | 142-496 |
| Cow position: | chr12:9130121-9129770 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 44, 18 |
| Conread position: | 143-512 |
| Cow position: | chr12:7110427-7110056 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 250 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 23, 31 |
| Conread position: | 145-549 |
| Cow position: | chr12:9482085-9482479 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 269 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 31, 11 |
| Conread position: | 147-512 |
| Cow position: | chr12:24032703-24032357 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 250 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 25, 80 |
| Conread position: | 148-350 |
| Cow position: | chr12:13995584-13995785 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 108, 40 |
| Conread position: | 148-503 |
| Cow position: | chr12:38215814-38216174 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 231 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 211, 148 |
| Conread position: | 148-544 |
| Cow position: | chr12:44622574-44622178 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 281 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 54, 18 |
| Conread position: | 150-484 |
| Cow position: | chr12:31269372-31269034 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 223 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 36, 88 |
| Conread position: | 151-404 |
| Cow position: | chr12:39149843-39150093 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 153-426 |
| Cow position: | chr12:42923904-42924176 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 11, 47 |
| Conread position: | 153-548 |
| Cow position: | chr12:6241534-6241133 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 317 |
| Conread position: | 156-351 |
| Cow position: | chr12:27663788-27663981 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 15, 10 |
| Conread position: | 156-446 |
| Cow position: | chr12:20404355-20404066 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 16, 44 |
| Conread position: | 157-547 |
| Cow position: | chr12:12636980-12637367 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 264 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 16, 45 |
| Conread position: | 160-493 |
| Cow position: | chr12:33495433-33495107 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 163-550 |
| Cow position: | chr12:1998601-1998982 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 248 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 43, 9 |
| Conread position: | 164-547 |
| Cow position: | chr12:23446909-23446536 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 263 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 358, 31 |
| Conread position: | 164-548 |
| Cow position: | chr12:25280307-25280673 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 263 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 39, 15 |
| Conread position: | 166-345 |
| Cow position: | chr12:39738100-39738281 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 14, 102 |
| Conread position: | 166-545 |
| Cow position: | chr12:11057063-11056703 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 250 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 30, 64 |
| Conread position: | 166-546 |
| Cow position: | chr12:4093576-4093921 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 166-548 |
| Cow position: | chr12:35368844-35368461 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 257 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 14, 96 |
| Conread position: | 170-358 |
| Cow position: | chr12:31602629-31602817 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 14, 41 |
| Conread position: | 170-492 |
| Cow position: | chr12:14223170-14222852 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 211 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 124, 27 |
| Conread position: | 176-359 |
| Cow position: | chr12:12699453-12699637 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 177-489 |
| Cow position: | chr12:9766699-9767001 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 177-545 |
| Cow position: | chr12:31530479-31530111 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 216, 11 |
| Conread position: | 177-545 |
| Cow position: | chr12:33851537-33851182 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 249 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 178-351 |
| Cow position: | chr12:44892390-44892219 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 178-429 |
| Cow position: | chr12:6187926-6188180 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 6, 185 |
| Conread position: | 178-470 |
| Cow position: | chr12:25343965-25343680 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 203 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 122, 10 |
| Conread position: | 179-477 |
| Cow position: | chr12:46122846-46122553 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 190 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 140, 117 |
| Conread position: | 179-507 |
| Cow position: | chr12:10942476-10942146 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 222 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 16, 254 |
| Conread position: | 179-536 |
| Cow position: | chr12:42784488-42784139 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 172, 48 |
| Conread position: | 179-540 |
| Cow position: | chr12:9710025-9710383 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 237 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 124, 20 |
| Conread position: | 179-552 |
| Cow position: | chr12:23917020-23916658 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 338, 88 |
| Conread position: | 179-555 |
| Cow position: | chr12:15938087-15938461 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 54 |
| Conread position: | 179-556 |
| Cow position: | chr12:15089695-15089326 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 336, 9 |
| Conread position: | 180-358 |
| Cow position: | chr12:6206512-6206336 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 132, 15 |
| Conread position: | 180-412 |
| Cow position: | chr12:43474937-43474711 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 180-486 |
| Cow position: | chr12:21780342-21780046 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 180-494 |
| Cow position: | chr12:17269984-17269673 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 15, 107 |
| Conread position: | 180-497 |
| Cow position: | chr12:24152520-24152208 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 213 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 180-521 |
| Cow position: | chr12:6102645-6102980 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 223 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 23, 102 |
| Conread position: | 180-521 |
| Cow position: | chr12:15784103-15783770 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 123, 19 |
| Conread position: | 180-531 |
| Cow position: | chr12:41658543-41658886 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 72, 18 |
| Conread position: | 180-533 |
| Cow position: | chr12:40360870-40360522 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 48, 19 |
| Conread position: | 180-538 |
| Cow position: | chr12:13643413-13643066 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 227 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 205, 24 |
| Conread position: | 180-545 |
| Cow position: | chr12:4720122-4719768 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 339, 15 |
| Conread position: | 180-546 |
| Cow position: | chr12:40910104-40910467 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 98 |
| Conread position: | 180-548 |
| Cow position: | chr12:33129435-33129088 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 247 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 15, 105 |
| Conread position: | 180-548 |
| Cow position: | chr12:42180948-42181317 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 250, 103 |
| Conread position: | 180-581 |
| Cow position: | chr12:43476534-43476148 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 266 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 42, 19 |
| Conread position: | 181-358 |
| Cow position: | chr12:35137100-35136923 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 181-527 |
| Cow position: | chr12:12301107-12300761 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 25, 185 |
| Conread position: | 182-486 |
| Cow position: | chr12:26749774-26750077 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 213 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 236, 16 |
| Conread position: | 182-507 |
| Cow position: | chr12:30590947-30590628 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 59, 76 |
| Conread position: | 182-509 |
| Cow position: | chr12:16670444-16670124 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 118, 45 |
| Conread position: | 182-546 |
| Cow position: | chr12:35124069-35123714 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 330, 21 |
| Conread position: | 183-414 |
| Cow position: | chr12:43974469-43974242 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 175, 0 |
| Conread position: | 183-477 |
| Cow position: | chr12:11660106-11659816 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 192 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 18, 161 |
| Conread position: | 183-481 |
| Cow position: | chr12:35240925-35241214 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 22, 122 |
| Conread position: | 183-513 |
| Cow position: | chr12:3371675-3372004 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 20, 100 |
| Conread position: | 183-531 |
| Cow position: | chr12:36790639-36790974 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 235 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 276, 14 |
| Conread position: | 183-541 |
| Cow position: | chr12:29899241-29899606 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 17, 124 |
| Conread position: | 183-548 |
| Cow position: | chr12:25561544-25561192 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 248 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 17, 93 |
| Conread position: | 183-548 |
| Cow position: | chr12:30745894-30745536 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 12, 90 |
| Conread position: | 183-548 |
| Cow position: | chr12:31948289-31947938 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 246 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 167, 79 |
| Conread position: | 184-546 |
| Cow position: | chr12:31228757-31228396 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 236 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 75, 15 |
| Conread position: | 184-548 |
| Cow position: | chr12:36500770-36501130 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 247 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 19, 111 |
| Conread position: | 187-326 |
| Cow position: | chr12:6719563-6719424 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 187-350 |
| Cow position: | chr12:37718597-37718758 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 187-548 |
| Cow position: | chr12:9143559-9143217 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 249 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 22, 41 |
| Conread position: | 188-523 |
| Cow position: | chr12:46714549-46714218 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 219 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 80, 145 |
| Conread position: | 188-540 |
| Cow position: | chr12:6242003-6242348 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 108, 80 |
| Conread position: | 188-545 |
| Cow position: | chr12:34473436-34473801 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 227 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 78, 149 |
| Conread position: | 188-545 |
| Cow position: | chr12:37771032-37770699 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 248 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 15, 33 |
| Conread position: | 188-546 |
| Cow position: | chr12:4162201-4162545 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 236 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 331, 79 |
| Conread position: | 188-547 |
| Cow position: | chr12:17879133-17879481 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 245 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 240, 82 |
| Conread position: | 188-548 |
| Cow position: | chr12:39465737-39465402 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 246 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 188-548 |
| Cow position: | chr12:42967167-42966820 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 294, 74 |
| Conread position: | 189-529 |
| Cow position: | chr12:37169775-37170104 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 15, 53 |
| Conread position: | 189-548 |
| Cow position: | chr12:8943046-8943399 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 250 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 86, 15 |
| Conread position: | 189-548 |
| Cow position: | chr12:42684765-42685127 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 243 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 39, 10 |
| Conread position: | 190-436 |
| Cow position: | chr12:17252033-17252271 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 190-522 |
| Cow position: | chr12:19258446-19258125 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 231 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 120, 40 |
| Conread position: | 190-546 |
| Cow position: | chr12:15050455-15050798 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 250 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 329, 36 |
| Conread position: | 190-548 |
| Cow position: | chr12:11587939-11587587 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 252 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 323, 43 |
| Conread position: | 190-548 |
| Cow position: | chr12:32051690-32051329 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 69, 123 |
| Conread position: | 191-488 |
| Cow position: | chr12:18103448-18103731 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 191 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 191-492 |
| Cow position: | chr12:19261364-19261074 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 191-515 |
| Cow position: | chr12:43559973-43560298 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 210 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 75, 130 |
| Conread position: | 191-523 |
| Cow position: | chr12:13988543-13988216 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 83, 234 |
| Conread position: | 191-523 |
| Cow position: | chr12:34333284-34332958 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 212 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 56, 8 |
| Conread position: | 191-525 |
| Cow position: | chr12:27563210-27563534 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 231 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 191-548 |
| Cow position: | chr12:19508395-19508748 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 255, 111 |
| Conread position: | 191-552 |
| Cow position: | chr12:35310513-35310857 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 240 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 102, 151 |
| Conread position: | 192-548 |
| Cow position: | chr12:30919602-30919240 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 235 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 95, 335 |
| Conread position: | 193-429 |
| Cow position: | chr12:30946913-30946677 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 110, 127 |
| Conread position: | 195-544 |
| Cow position: | chr12:26217662-26218000 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 170, 45 |
| Conread position: | 195-545 |
| Cow position: | chr12:15414706-15415050 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 226, 25 |
| Conread position: | 198-425 |
| Cow position: | chr12:36261856-36261627 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 199-350 |
| Cow position: | chr12:43619444-43619293 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 124, 32 |
| Conread position: | 199-358 |
| Cow position: | chr12:22048085-22047926 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 199-408 |
| Cow position: | chr12:14986908-14986704 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 199-429 |
| Cow position: | chr12:15496058-15495832 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 185, 57 |
| Conread position: | 199-470 |
| Cow position: | chr12:42286125-42285866 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 90, 55 |
| Conread position: | 199-479 |
| Cow position: | chr12:18582838-18583104 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 199-523 |
| Cow position: | chr12:4596634-4596310 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 218 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 69, 167 |
| Conread position: | 199-523 |
| Cow position: | chr12:35770863-35771174 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 214 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 199-545 |
| Cow position: | chr12:17080427-17080083 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 79, 231 |
| Conread position: | 199-547 |
| Cow position: | chr12:35779759-35780102 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 231 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 132, 166 |
| Conread position: | 199-548 |
| Cow position: | chr12:4769080-4768746 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 227, 66 |
| Conread position: | 199-548 |
| Cow position: | chr12:5714779-5714448 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 238 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 199-548 |
| Cow position: | chr12:11836389-11836053 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 199-548 |
| Cow position: | chr12:17031770-17031435 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 227 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 15, 59 |
| Conread position: | 199-548 |
| Cow position: | chr12:17882016-17881682 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 300, 62 |
| Conread position: | 199-548 |
| Cow position: | chr12:18123827-18123506 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 199-548 |
| Cow position: | chr12:18518833-18518486 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 238, 73 |
| Conread position: | 199-548 |
| Cow position: | chr12:30210631-30210302 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 199-548 |
| Cow position: | chr12:33976364-33976021 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 238 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 95, 234 |
| Conread position: | 199-548 |
| Cow position: | chr12:36544483-36544829 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 7, 79 |
| Conread position: | 199-548 |
| Cow position: | chr12:39486591-39486253 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 230 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 6, 75 |
| Conread position: | 199-549 |
| Cow position: | chr12:7884519-7884851 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 199-549 |
| Cow position: | chr12:10895393-10895727 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 232 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 176, 21 |
| Conread position: | 199-549 |
| Cow position: | chr12:20776768-20777103 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 111, 76 |
| Conread position: | 199-573 |
| Cow position: | chr12:20071408-20071785 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 242 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 35, 122 |
| Conread position: | 200-350 |
| Cow position: | chr12:37742461-37742311 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 200-357 |
| Cow position: | chr12:3057249-3057093 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 200-546 |
| Cow position: | chr12:18577987-18577668 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 235 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 133, 70 |
| Conread position: | 200-547 |
| Cow position: | chr12:19502254-19502595 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 40, 227 |
| Conread position: | 200-548 |
| Cow position: | chr12:30806013-30805674 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 240 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 12, 52 |
| Conread position: | 201-545 |
| Cow position: | chr12:21393869-21393528 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 219 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 92, 61 |
| Conread position: | 203-409 |
| Cow position: | chr12:26147011-26147216 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 78, 65 |
| Conread position: | 203-428 |
| Cow position: | chr12:40157871-40158087 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 203-494 |
| Cow position: | chr12:26576049-26575760 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 220, 67 |
| Conread position: | 203-502 |
| Cow position: | chr12:37008553-37008839 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 195 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 296, 63 |
| Conread position: | 203-523 |
| Cow position: | chr12:3623848-3623539 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 203-523 |
| Cow position: | chr12:46120661-46120985 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 76, 11 |
| Conread position: | 203-545 |
| Cow position: | chr12:42879856-42879518 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 71, 104 |
| Conread position: | 203-546 |
| Cow position: | chr12:32169703-32169362 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 227 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 63, 43 |
| Conread position: | 203-548 |
| Cow position: | chr12:18420764-18421103 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 42, 115 |
| Conread position: | 203-555 |
| Cow position: | chr12:5635295-5635634 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 236 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 205-513 |
| Cow position: | chr12:24116218-24116509 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 115, 67 |
| Conread position: | 205-533 |
| Cow position: | chr12:48415365-48415682 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 243, 29 |
| Conread position: | 205-544 |
| Cow position: | chr12:15703340-15703673 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 83, 29 |
| Conread position: | 209-477 |
| Cow position: | chr12:23939370-23939114 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 210-426 |
| Cow position: | chr12:15389220-15389008 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 165, 71 |
| Conread position: | 211-552 |
| Cow position: | chr12:41091684-41091349 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 304, 108 |
| Conread position: | 213-548 |
| Cow position: | chr12:23574917-23574590 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 60, 221 |
| Conread position: | 213-548 |
| Cow position: | chr12:31532262-31532586 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 226, 14 |
| Conread position: | 214-546 |
| Cow position: | chr12:19866390-19866059 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 69, 25 |
| Conread position: | 215-413 |
| Cow position: | chr12:12532346-12532541 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 160, 32 |
| Conread position: | 215-548 |
| Cow position: | chr12:22515593-22515916 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 304, 60 |
| Conread position: | 215-551 |
| Cow position: | chr12:15122470-15122137 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 238 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 173, 61 |
| Conread position: | 218-581 |
| Cow position: | chr12:28749086-28748727 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 240 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 301, 145 |
| Conread position: | 220-548 |
| Cow position: | chr12:24663260-24662938 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 55, 77 |
| Conread position: | 221-489 |
| Cow position: | chr12:5631745-5632003 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 207, 33 |
| Conread position: | 222-549 |
| Cow position: | chr12:25917138-25917444 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 160, 61 |
| Conread position: | 223-547 |
| Cow position: | chr12:19154480-19154797 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 211 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 12, 63 |
| Conread position: | 227-544 |
| Cow position: | chr12:22287409-22287100 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 63, 88 |
| Conread position: | 229-542 |
| Cow position: | chr12:20636019-20636333 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 224, 90 |
| Conread position: | 231-548 |
| Cow position: | chr12:30661820-30662129 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 224 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 288, 65 |
| Conread position: | 234-547 |
| Cow position: | chr12:43942598-43942298 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 125, 77 |
| Conread position: | 234-552 |
| Cow position: | chr12:7299335-7299652 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 220 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 76, 47 |
| Conread position: | 237-548 |
| Cow position: | chr12:41159713-41159412 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 276, 134 |
| Conread position: | 238-521 |
| Cow position: | chr12:42254791-42254514 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 159, 55 |
| Conread position: | 247-547 |
| Cow position: | chr12:33323381-33323674 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 63, 30 |
| Conread position: | 265-548 |
| Cow position: | chr12:45820270-45820539 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 101, 12 |
| Conread position: | 266-548 |
| Cow position: | chr12:32715143-32714864 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 21, 99 |
| Conread position: | 277-548 |
| Cow position: | chr12:7978123-7977862 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 242, 83 |
| Conread position: | 277-549 |
| Cow position: | chr12:41581197-41580935 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 183 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 21, 76 |
| Conread position: | 280-502 |
| Cow position: | chr12:44733009-44733225 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 148, 0 |
| Conread position: | 280-517 |
| Cow position: | chr12:15173906-15173676 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 280-548 |
| Cow position: | chr12:6720410-6720143 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 93, 20 |
| Conread position: | 280-548 |
| Cow position: | chr12:19691151-19691414 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 280-548 |
| Cow position: | chr12:29770496-29770753 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 283-548 |
| Cow position: | chr12:17001338-17001082 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 283-548 |
| Cow position: | chr12:29483807-29484070 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 92, 11 |
| Conread position: | 284-511 |
| Cow position: | chr12:15700159-15699931 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 67, 51 |
| Conread position: | 284-532 |
| Cow position: | chr12:25188267-25188023 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 88, 145 |
| Conread position: | 284-544 |
| Cow position: | chr12:42163117-42162862 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 128, 13 |
| Conread position: | 284-545 |
| Cow position: | chr12:44595731-44595987 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 284-548 |
| Cow position: | chr12:3950267-3950527 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 183 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 235, 9 |
| Conread position: | 284-548 |
| Cow position: | chr12:27037371-27037625 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 157, 0 |
| Conread position: | 284-548 |
| Cow position: | chr12:44517659-44517916 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 235, 129 |
| Conread position: | 284-555 |
| Cow position: | chr12:7000526-7000792 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 235, 38 |
| Conread position: | 284-556 |
| Cow position: | chr12:9914868-9914599 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 235, 147 |
| Conread position: | 285-546 |
| Cow position: | chr12:25320992-25320744 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 285-548 |
| Cow position: | chr12:6210082-6210337 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 40, 25 |
| Conread position: | 290-530 |
| Cow position: | chr12:41215812-41216046 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 290-545 |
| Cow position: | chr12:18765900-18766155 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 97, 103 |
| Conread position: | 290-548 |
| Cow position: | chr12:29969652-29969400 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 227, 141 |
| Conread position: | 290-548 |
| Cow position: | chr12:31429498-31429750 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 290-549 |
| Cow position: | chr12:24211480-24211239 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 290-555 |
| Cow position: | chr12:30753792-30753532 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 221, 71 |
| Conread position: | 293-546 |
| Cow position: | chr12:22882125-22881873 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 183, 16 |
| Conread position: | 294-548 |
| Cow position: | chr12:2711567-2711312 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 70, 79 |
| Conread position: | 294-548 |
| Cow position: | chr12:5801112-5800854 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 18, 104 |
| Conread position: | 297-546 |
| Cow position: | chr12:30170734-30170490 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 297-548 |
| Cow position: | chr12:3906540-3906292 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 9, 30 |
| Conread position: | 297-548 |
| Cow position: | chr12:5906122-5905877 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 299-547 |
| Cow position: | chr12:29995400-29995639 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 299-548 |
| Cow position: | chr12:8868818-8869057 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 299-548 |
| Cow position: | chr12:18963864-18964107 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 299-548 |
| Cow position: | chr12:45814198-45814441 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 99, 73 |
| Conread position: | 311-548 |
| Cow position: | chr12:10491323-10491092 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 208, 43 |
| Conread position: | 314-548 |
| Cow position: | chr12:23798148-23797928 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 314-548 |
| Cow position: | chr12:28582459-28582682 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 12, 7 |
| Conread position: | 314-548 |
| Cow position: | chr12:33458196-33457965 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 316-533 |
| Cow position: | chr12:9894829-9894617 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 205, 100 |
| Conread position: | 318-548 |
| Cow position: | chr12:23855881-23855655 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 200, 42 |
| Conread position: | 370-548 |
| Cow position: | chr12:34385514-34385694 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 60, 82 |
| Conread position: | 373-548 |
| Cow position: | chr12:3579276-3579104 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 373-548 |
| Cow position: | chr12:6164032-6164205 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 373-548 |
| Cow position: | chr12:26317455-26317283 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 55, 74 |
| Conread position: | 384-548 |
| Cow position: | chr12:41214342-41214502 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 387-541 |
| Cow position: | chr12:20354952-20354796 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 44, 74 |
| Conread position: | 387-548 |
| Cow position: | chr12:4182715-4182871 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 132, 45 |
| Conread position: | 387-548 |
| Cow position: | chr12:25456095-25455938 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 132, 44 |
| Conread position: | 387-548 |
| Cow position: | chr12:28650933-28650776 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 132, 44 |
| Conread position: | 387-548 |
| Cow position: | chr12:38511860-38512022 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 128, 45 |
| Conread position: | 392-546 |
| Cow position: | chr12:29921814-29921960 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 394-548 |
| Cow position: | chr12:17702257-17702409 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 108, 37 |
| Conread position: | 403-548 |
| Cow position: | chr12:3039471-3039320 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 426-543 |
| Cow position: | chr12:44919976-44919859 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 426-546 |
| Cow position: | chr12:44559529-44559410 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 93, 16 |
| Conread position: | 426-548 |
| Cow position: | chr12:20326713-20326594 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 435-548 |
| Cow position: | chr12:3510495-3510387 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 442-555 |
| Cow position: | chr12:40270166-40270281 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 76, 0 |
Show alignments to all cow chromosomes.