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Cow genome map

           
Conread name:
           
rtra22_d15r1.y1
        

               
Conread position:
               
74-493
               

               
Cow position:
               
chr15:27230527-27230938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
15, 37
               

               
Conread position:
               
128-548
               

               
Cow position:
               
chr15:23275345-23275765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
41, 14
               

               
Conread position:
               
141-429
               

               
Cow position:
               
chr15:38652773-38652484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
45, 23
               

               
Conread position:
               
150-547
               

               
Cow position:
               
chr15:607982-608376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 276
               

               
Conread position:
               
151-546
               

               
Cow position:
               
chr15:23798678-23798295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
368, 20
               

               
Conread position:
               
151-548
               

               
Cow position:
               
chr15:275484-275874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
45, 103
               

               
Conread position:
               
153-548
               

               
Cow position:
               
chr15:35641859-35642251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 19
               

               
Conread position:
               
155-574
               

               
Cow position:
               
chr15:5443827-5444239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
9, 45
               

               
Conread position:
               
156-549
               

               
Cow position:
               
chr15:44658218-44658589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
210, 21
               

               
Conread position:
               
157-421
               

               
Cow position:
               
chr15:39474090-39473826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
29, 206
               

               
Conread position:
               
161-579
               

               
Cow position:
               
chr15:2380217-2380618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
394, 133
               

               
Conread position:
               
163-548
               

               
Cow position:
               
chr15:17100851-17100479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
163-555
               

               
Cow position:
               
chr15:30986431-30986048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
134, 36
               

               
Conread position:
               
164-545
               

               
Cow position:
               
chr15:36259744-36259375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
42, 95
               

               
Conread position:
               
166-546
               

               
Cow position:
               
chr15:36353522-36353897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 113
               

               
Conread position:
               
167-544
               

               
Cow position:
               
chr15:22930492-22930113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
352, 81
               

               
Conread position:
               
167-548
               

               
Cow position:
               
chr15:11658721-11658338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
120, 13
               

               
Conread position:
               
169-513
               

               
Cow position:
               
chr15:43674088-43673742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
37, 90
               

               
Conread position:
               
170-547
               

               
Cow position:
               
chr15:45478861-45479236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
125, 18
               

               
Conread position:
               
171-596
               

               
Cow position:
               
chr15:21893638-21894061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 105
               

               
Conread position:
               
172-358
               

               
Cow position:
               
chr15:40562819-40562636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
173-350
               

               
Cow position:
               
chr15:26380884-26380706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
173-544
               

               
Cow position:
               
chr15:6168668-6168292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
117, 26
               

               
Conread position:
               
174-546
               

               
Cow position:
               
chr15:1857592-1857956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
333, 25
               

               
Conread position:
               
174-549
               

               
Cow position:
               
chr15:3700419-3700054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
28, 6
               

               
Conread position:
               
174-549
               

               
Cow position:
               
chr15:21941980-21941615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
341, 13
               

               
Conread position:
               
175-546
               

               
Cow position:
               
chr15:16112259-16112630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
29, 267
               

               
Conread position:
               
176-470
               

               
Cow position:
               
chr15:15177186-15177467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
199, 19
               

               
Conread position:
               
177-543
               

               
Cow position:
               
chr15:24616436-24616799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
109, 22
               

               
Conread position:
               
177-547
               

               
Cow position:
               
chr15:14576194-14576564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
18, 58
               

               
Conread position:
               
177-548
               

               
Cow position:
               
chr15:225933-225577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
110, 11
               

               
Conread position:
               
178-511
               

               
Cow position:
               
chr15:4919200-4918873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
90, 10
               

               
Conread position:
               
178-521
               

               
Cow position:
               
chr15:6905409-6905738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
197, 10
               

               
Conread position:
               
178-545
               

               
Cow position:
               
chr15:49922004-49922368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
62, 53
               

               
Conread position:
               
178-548
               

               
Cow position:
               
chr15:21420817-21421174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
341, 25
               

               
Conread position:
               
178-548
               

               
Cow position:
               
chr15:25208886-25208538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
181, 18
               

               
Conread position:
               
178-548
               

               
Cow position:
               
chr15:33284745-33285112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
6, 22
               

               
Conread position:
               
179-470
               

               
Cow position:
               
chr15:43114845-43114569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
249, 27
               

               
Conread position:
               
179-477
               

               
Cow position:
               
chr15:25571941-25571648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
124, 20
               

               
Conread position:
               
179-500
               

               
Cow position:
               
chr15:5719935-5719625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
57, 79
               

               
Conread position:
               
179-548
               

               
Cow position:
               
chr15:11560645-11560281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
137, 39
               

               
Conread position:
               
179-548
               

               
Cow position:
               
chr15:16017903-16018265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
121, 136
               

               
Conread position:
               
179-548
               

               
Cow position:
               
chr15:39598121-39598473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
179-554
               

               
Cow position:
               
chr15:4138007-4138370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
345, 18
               

               
Conread position:
               
180-324
               

               
Cow position:
               
chr15:36904171-36904318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
180-430
               

               
Cow position:
               
chr15:26896826-26896579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
114, 18
               

               
Conread position:
               
180-434
               

               
Cow position:
               
chr15:42380799-42381051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
250, 47
               

               
Conread position:
               
180-507
               

               
Cow position:
               
chr15:5409023-5408719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
180-521
               

               
Cow position:
               
chr15:38037077-38036738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
15, 56
               

               
Conread position:
               
180-533
               

               
Cow position:
               
chr15:33178552-33178209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
58, 17
               

               
Conread position:
               
180-544
               

               
Cow position:
               
chr15:5499157-5498802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
36, 147
               

               
Conread position:
               
180-546
               

               
Cow position:
               
chr15:2968207-2968565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
197, 18
               

               
Conread position:
               
180-546
               

               
Cow position:
               
chr15:28924890-28924534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
180-546
               

               
Cow position:
               
chr15:47990898-47990537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
20, 137
               

               
Conread position:
               
180-548
               

               
Cow position:
               
chr15:4295631-4295995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
102, 35
               

               
Conread position:
               
180-548
               

               
Cow position:
               
chr15:14505318-14505656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
180-548
               

               
Cow position:
               
chr15:20459441-20459069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
25, 243
               

               
Conread position:
               
180-548
               

               
Cow position:
               
chr15:23114707-23115074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
123, 18
               

               
Conread position:
               
180-548
               

               
Cow position:
               
chr15:23572818-23572448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 192
               

               
Conread position:
               
180-548
               

               
Cow position:
               
chr15:27900635-27900278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
12, 68
               

               
Conread position:
               
180-554
               

               
Cow position:
               
chr15:22553670-22553306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
181-415
               

               
Cow position:
               
chr15:22444115-22443885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
187, 0
               

               
Conread position:
               
181-415
               

               
Cow position:
               
chr15:48095228-48095463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
91, 193
               

               
Conread position:
               
181-489
               

               
Cow position:
               
chr15:15987024-15986711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
11, 141
               

               
Conread position:
               
181-543
               

               
Cow position:
               
chr15:11987537-11987183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
109, 88
               

               
Conread position:
               
181-548
               

               
Cow position:
               
chr15:1083496-1083145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
112, 17
               

               
Conread position:
               
181-548
               

               
Cow position:
               
chr15:10457156-10456782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
88, 207
               

               
Conread position:
               
181-548
               

               
Cow position:
               
chr15:39405616-39405962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
338, 14
               

               
Conread position:
               
181-555
               

               
Cow position:
               
chr15:36621271-36621655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
11, 29
               

               
Conread position:
               
182-338
               

               
Cow position:
               
chr15:43590085-43590241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
182-423
               

               
Cow position:
               
chr15:11909073-11908840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
182-429
               

               
Cow position:
               
chr15:49131931-49132175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
22, 94
               

               
Conread position:
               
182-470
               

               
Cow position:
               
chr15:13395416-13395703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
26, 6
               

               
Conread position:
               
182-516
               

               
Cow position:
               
chr15:19950356-19950672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
22, 68
               

               
Conread position:
               
182-523
               

               
Cow position:
               
chr15:16928218-16927892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
22, 35
               

               
Conread position:
               
182-546
               

               
Cow position:
               
chr15:25667353-25666994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
13, 195
               

               
Conread position:
               
182-548
               

               
Cow position:
               
chr15:36391544-36391898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
193, 187
               

               
Conread position:
               
182-548
               

               
Cow position:
               
chr15:37381507-37381858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
335, 17
               

               
Conread position:
               
182-548
               

               
Cow position:
               
chr15:38806636-38806268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
34, 107
               

               
Conread position:
               
183-350
               

               
Cow position:
               
chr15:840269-840110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
183-544
               

               
Cow position:
               
chr15:49273836-49274178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
183-546
               

               
Cow position:
               
chr15:22939451-22939096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
20, 81
               

               
Conread position:
               
184-545
               

               
Cow position:
               
chr15:17762783-17763135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
19, 35
               

               
Conread position:
               
184-549
               

               
Cow position:
               
chr15:11011718-11011373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
192, 60
               

               
Conread position:
               
185-358
               

               
Cow position:
               
chr15:17124595-17124422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
187-348
               

               
Cow position:
               
chr15:16415174-16415333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
187-358
               

               
Cow position:
               
chr15:30956447-30956277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
16, 86
               

               
Conread position:
               
187-523
               

               
Cow position:
               
chr15:12785302-12785629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
11, 178
               

               
Conread position:
               
187-546
               

               
Cow position:
               
chr15:2141443-2141071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
83, 23
               

               
Conread position:
               
187-546
               

               
Cow position:
               
chr15:24967679-24968022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
339, 85
               

               
Conread position:
               
188-339
               

               
Cow position:
               
chr15:25366186-25366034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
188-349
               

               
Cow position:
               
chr15:27656980-27657142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
188-352
               

               
Cow position:
               
chr15:20906150-20905992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
188-489
               

               
Cow position:
               
chr15:13432361-13432665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
96, 103
               

               
Conread position:
               
188-540
               

               
Cow position:
               
chr15:33693493-33693140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
171, 229
               

               
Conread position:
               
188-544
               

               
Cow position:
               
chr15:1502792-1503131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
188-545
               

               
Cow position:
               
chr15:26919390-26919050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
188, 46
               

               
Conread position:
               
188-546
               

               
Cow position:
               
chr15:4418523-4418172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
330, 115
               

               
Conread position:
               
188-547
               

               
Cow position:
               
chr15:17233065-17233423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
107, 176
               

               
Conread position:
               
188-548
               

               
Cow position:
               
chr15:10088198-10088550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
310, 84
               

               
Conread position:
               
188-548
               

               
Cow position:
               
chr15:19771015-19771364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
15, 85
               

               
Conread position:
               
188-548
               

               
Cow position:
               
chr15:50957930-50957566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
69, 16
               

               
Conread position:
               
189-436
               

               
Cow position:
               
chr15:9978983-9979224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
189-445
               

               
Cow position:
               
chr15:47844208-47843962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
189-538
               

               
Cow position:
               
chr15:29027003-29026660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
100, 116
               

               
Conread position:
               
189-548
               

               
Cow position:
               
chr15:5235111-5234773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
189-548
               

               
Cow position:
               
chr15:5726195-5726555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
86, 38
               

               
Conread position:
               
189-548
               

               
Cow position:
               
chr15:20534572-20534214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
243, 10
               

               
Conread position:
               
190-350
               

               
Cow position:
               
chr15:26617816-26617977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
190-350
               

               
Cow position:
               
chr15:44089282-44089125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
190-546
               

               
Cow position:
               
chr15:36435083-36435435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
185, 170
               

               
Conread position:
               
190-548
               

               
Cow position:
               
chr15:45542-45186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
168, 9
               

               
Conread position:
               
190-548
               

               
Cow position:
               
chr15:286353-286709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
76, 173
               

               
Conread position:
               
190-548
               

               
Cow position:
               
chr15:46563596-46563263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
190-549
               

               
Cow position:
               
chr15:19186742-19186387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
37, 169
               

               
Conread position:
               
190-554
               

               
Cow position:
               
chr15:17870411-17870049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
77, 255
               

               
Conread position:
               
191-512
               

               
Cow position:
               
chr15:14474222-14474532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
268, 220
               

               
Conread position:
               
191-513
               

               
Cow position:
               
chr15:19807841-19807522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
75, 129
               

               
Conread position:
               
191-513
               

               
Cow position:
               
chr15:36793610-36793297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
236, 40
               

               
Conread position:
               
191-531
               

               
Cow position:
               
chr15:34478570-34478909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
255, 240
               

               
Conread position:
               
191-544
               

               
Cow position:
               
chr15:16439952-16439602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
104, 124
               

               
Conread position:
               
191-548
               

               
Cow position:
               
chr15:8006860-8007212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
268, 159
               

               
Conread position:
               
191-548
               

               
Cow position:
               
chr15:20472662-20472318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
191-548
               

               
Cow position:
               
chr15:32980152-32979807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
328, 49
               

               
Conread position:
               
191-548
               

               
Cow position:
               
chr15:43031144-43030794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
111, 124
               

               
Conread position:
               
191-548
               

               
Cow position:
               
chr15:43914216-43913857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
107, 124
               

               
Conread position:
               
191-549
               

               
Cow position:
               
chr15:52611169-52611541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
84, 264
               

               
Conread position:
               
192-513
               

               
Cow position:
               
chr15:14740804-14740488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
103, 128
               

               
Conread position:
               
192-525
               

               
Cow position:
               
chr15:6233132-6232808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
163, 89
               

               
Conread position:
               
193-412
               

               
Cow position:
               
chr15:38420671-38420453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
179, 0
               

               
Conread position:
               
193-555
               

               
Cow position:
               
chr15:21832560-21832187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
35, 68
               

               
Conread position:
               
195-548
               

               
Cow position:
               
chr15:43827886-43827543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
171, 95
               

               
Conread position:
               
198-490
               

               
Cow position:
               
chr15:10442623-10442331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
10, 190
               

               
Conread position:
               
199-350
               

               
Cow position:
               
chr15:33729775-33729930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
199-352
               

               
Cow position:
               
chr15:2931681-2931527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
199-357
               

               
Cow position:
               
chr15:27975983-27975826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
199-430
               

               
Cow position:
               
chr15:21903517-21903292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
199-481
               

               
Cow position:
               
chr15:41053881-41053603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
91, 118
               

               
Conread position:
               
199-481
               

               
Cow position:
               
chr15:42888945-42888674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
31, 20
               

               
Conread position:
               
199-485
               

               
Cow position:
               
chr15:14987885-14988157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
158, 66
               

               
Conread position:
               
199-491
               

               
Cow position:
               
chr15:29541755-29542054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
60, 115
               

               
Conread position:
               
199-493
               

               
Cow position:
               
chr15:41528076-41527802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
199-517
               

               
Cow position:
               
chr15:37865250-37865565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
68, 16
               

               
Conread position:
               
199-519
               

               
Cow position:
               
chr15:8665717-8665390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
199-522
               

               
Cow position:
               
chr15:31929008-31928694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
45, 85
               

               
Conread position:
               
199-523
               

               
Cow position:
               
chr15:5158261-5158580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
239, 0
               

               
Conread position:
               
199-528
               

               
Cow position:
               
chr15:5717609-5717921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
320, 72
               

               
Conread position:
               
199-537
               

               
Cow position:
               
chr15:30471089-30470750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
88, 236
               

               
Conread position:
               
199-538
               

               
Cow position:
               
chr15:10231853-10231521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
260, 75
               

               
Conread position:
               
199-539
               

               
Cow position:
               
chr15:48851603-48851268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
6, 12
               

               
Conread position:
               
199-543
               

               
Cow position:
               
chr15:40957468-40957803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
80, 122
               

               
Conread position:
               
199-545
               

               
Cow position:
               
chr15:39599339-39599669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
199-545
               

               
Cow position:
               
chr15:50322501-50322823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
177, 47
               

               
Conread position:
               
199-546
               

               
Cow position:
               
chr15:4179049-4178708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
229, 76
               

               
Conread position:
               
199-546
               

               
Cow position:
               
chr15:6462603-6462268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
176, 78
               

               
Conread position:
               
199-546
               

               
Cow position:
               
chr15:29810015-29810343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
199-546
               

               
Cow position:
               
chr15:30047664-30047314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
86, 117
               

               
Conread position:
               
199-547
               

               
Cow position:
               
chr15:795127-794787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
111, 76
               

               
Conread position:
               
199-548
               

               
Cow position:
               
chr15:662574-662241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
268, 70
               

               
Conread position:
               
199-548
               

               
Cow position:
               
chr15:11996138-11995795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
320, 95
               

               
Conread position:
               
199-548
               

               
Cow position:
               
chr15:12304529-12304872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
199-548
               

               
Cow position:
               
chr15:22532143-22532468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
199-548
               

               
Cow position:
               
chr15:22938877-22938539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
72, 236
               

               
Conread position:
               
199-548
               

               
Cow position:
               
chr15:26912178-26911848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
160, 27
               

               
Conread position:
               
199-548
               

               
Cow position:
               
chr15:33303198-33303562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
66, 21
               

               
Conread position:
               
199-548
               

               
Cow position:
               
chr15:38883032-38883383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
73, 164
               

               
Conread position:
               
199-548
               

               
Cow position:
               
chr15:43626354-43626699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 98
               

               
Conread position:
               
199-548
               

               
Cow position:
               
chr15:51427936-51427592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
161, 82
               

               
Conread position:
               
199-548
               

               
Cow position:
               
chr15:53037072-53036738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
247, 77
               

               
Conread position:
               
199-556
               

               
Cow position:
               
chr15:24804910-24804551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
228, 111
               

               
Conread position:
               
200-334
               

               
Cow position:
               
chr15:51831901-51831767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
200-546
               

               
Cow position:
               
chr15:10246104-10245777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
175, 80
               

               
Conread position:
               
200-546
               

               
Cow position:
               
chr15:53716325-53716661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
200-548
               

               
Cow position:
               
chr15:32324317-32323974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
319, 160
               

               
Conread position:
               
201-350
               

               
Cow position:
               
chr15:16657361-16657511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
203-467
               

               
Cow position:
               
chr15:3695531-3695784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
203-473
               

               
Cow position:
               
chr15:50332869-50333144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
74, 162
               

               
Conread position:
               
203-493
               

               
Cow position:
               
chr15:39286517-39286237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
203-548
               

               
Cow position:
               
chr15:16667604-16667272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 138
               

               
Conread position:
               
203-548
               

               
Cow position:
               
chr15:24994617-24994290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
203-548
               

               
Cow position:
               
chr15:36887733-36888054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
203-549
               

               
Cow position:
               
chr15:45584616-45584953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
80, 165
               

               
Conread position:
               
204-548
               

               
Cow position:
               
chr15:41045297-41045633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
98, 83
               

               
Conread position:
               
205-546
               

               
Cow position:
               
chr15:244678-245005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
93, 39
               

               
Conread position:
               
205-548
               

               
Cow position:
               
chr15:1330213-1329872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 229
               

               
Conread position:
               
209-497
               

               
Cow position:
               
chr15:39833078-39832796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
94, 111
               

               
Conread position:
               
210-507
               

               
Cow position:
               
chr15:40379113-40379401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
210-520
               

               
Cow position:
               
chr15:24797902-24797609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
170, 62
               

               
Conread position:
               
210-548
               

               
Cow position:
               
chr15:34896662-34896993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
41, 69
               

               
Conread position:
               
210-555
               

               
Cow position:
               
chr15:18671548-18671215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
212-547
               

               
Cow position:
               
chr15:17196048-17196371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
307, 199
               

               
Conread position:
               
213-510
               

               
Cow position:
               
chr15:9465578-9465870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
226, 231
               

               
Conread position:
               
213-513
               

               
Cow position:
               
chr15:14888733-14888445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
234, 59
               

               
Conread position:
               
213-546
               

               
Cow position:
               
chr15:17337276-17337587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
213-546
               

               
Cow position:
               
chr15:26903097-26903425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
223, 54
               

               
Conread position:
               
213-548
               

               
Cow position:
               
chr15:5420978-5420655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
175, 59
               

               
Conread position:
               
213-548
               

               
Cow position:
               
chr15:6969891-6970213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
74, 17
               

               
Conread position:
               
213-548
               

               
Cow position:
               
chr15:8353945-8354274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
213-548
               

               
Cow position:
               
chr15:20370548-20370226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
244, 62
               

               
Conread position:
               
213-548
               

               
Cow position:
               
chr15:25906822-25907139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
222, 59
               

               
Conread position:
               
213-548
               

               
Cow position:
               
chr15:31857493-31857819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
214-529
               

               
Cow position:
               
chr15:21583022-21582712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
217, 0
               

               
Conread position:
               
214-548
               

               
Cow position:
               
chr15:23696997-23696680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
150, 50
               

               
Conread position:
               
214-548
               

               
Cow position:
               
chr15:38837649-38837977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
69, 54
               

               
Conread position:
               
215-548
               

               
Cow position:
               
chr15:33642996-33643320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
8, 61
               

               
Conread position:
               
215-555
               

               
Cow position:
               
chr15:23180351-23180675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
302, 60
               

               
Conread position:
               
215-556
               

               
Cow position:
               
chr15:33306026-33306348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
216-512
               

               
Cow position:
               
chr15:11424879-11425167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
8, 100
               

               
Conread position:
               
216-540
               

               
Cow position:
               
chr15:2953226-2952906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
217, 59
               

               
Conread position:
               
217-521
               

               
Cow position:
               
chr15:34284502-34284208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
116, 55
               

               
Conread position:
               
220-548
               

               
Cow position:
               
chr15:1804422-1804101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
141, 48
               

               
Conread position:
               
224-548
               

               
Cow position:
               
chr15:25585177-25584862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
66, 96
               

               
Conread position:
               
227-546
               

               
Cow position:
               
chr15:7308240-7307924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
76, 45
               

               
Conread position:
               
228-546
               

               
Cow position:
               
chr15:21907862-21908164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
229-557
               

               
Cow position:
               
chr15:23866152-23865827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
74, 91
               

               
Conread position:
               
231-548
               

               
Cow position:
               
chr15:11559432-11559124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
288, 46
               

               
Conread position:
               
244-546
               

               
Cow position:
               
chr15:39621266-39621573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
21, 191
               

               
Conread position:
               
247-548
               

               
Cow position:
               
chr15:915904-915615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
271, 27
               

               
Conread position:
               
251-548
               

               
Cow position:
               
chr15:362965-363254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
115, 59
               

               
Conread position:
               
251-548
               

               
Cow position:
               
chr15:10512327-10512040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
212, 78
               

               
Conread position:
               
259-536
               

               
Cow position:
               
chr15:26573327-26573597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
260, 50
               

               
Conread position:
               
264-546
               

               
Cow position:
               
chr15:29330958-29331232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
111, 95
               

               
Conread position:
               
265-548
               

               
Cow position:
               
chr15:33976742-33976458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
123, 208
               

               
Conread position:
               
268-548
               

               
Cow position:
               
chr15:41000113-40999838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
268-553
               

               
Cow position:
               
chr15:6530892-6530613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
160, 0
               

               
Conread position:
               
270-523
               

               
Cow position:
               
chr15:28258499-28258250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
277-548
               

               
Cow position:
               
chr15:10335723-10335987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
103, 17
               

               
Conread position:
               
279-548
               

               
Cow position:
               
chr15:12870897-12870633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
248, 135
               

               
Conread position:
               
279-548
               

               
Cow position:
               
chr15:20422810-20422548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
169, 9
               

               
Conread position:
               
280-510
               

               
Cow position:
               
chr15:12616-12843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
280-524
               

               
Cow position:
               
chr15:35205184-35204942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
98, 30
               

               
Conread position:
               
280-545
               

               
Cow position:
               
chr15:10608336-10608078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
281-549
               

               
Cow position:
               
chr15:46868745-46868480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
284-509
               

               
Cow position:
               
chr15:35441106-35440884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
153, 76
               

               
Conread position:
               
284-520
               

               
Cow position:
               
chr15:23780095-23779869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
284-545
               

               
Cow position:
               
chr15:35945502-35945753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
284-546
               

               
Cow position:
               
chr15:21389191-21388939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
87, 13
               

               
Conread position:
               
284-546
               

               
Cow position:
               
chr15:22871586-22871835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
235, 51
               

               
Conread position:
               
284-546
               

               
Cow position:
               
chr15:42789176-42788922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
284-547
               

               
Cow position:
               
chr15:50302156-50302413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
284-548
               

               
Cow position:
               
chr15:13554326-13554585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
235, 9
               

               
Conread position:
               
284-548
               

               
Cow position:
               
chr15:37205019-37205275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
10, 142
               

               
Conread position:
               
284-548
               

               
Cow position:
               
chr15:39316870-39316604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
153, 191
               

               
Conread position:
               
285-545
               

               
Cow position:
               
chr15:16603798-16604050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
232, 83
               

               
Conread position:
               
285-548
               

               
Cow position:
               
chr15:34207214-34206958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
176, 75
               

               
Conread position:
               
285-569
               

               
Cow position:
               
chr15:2145165-2144879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
88, 109
               

               
Conread position:
               
288-548
               

               
Cow position:
               
chr15:9107012-9107267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
231, 6
               

               
Conread position:
               
288-552
               

               
Cow position:
               
chr15:50088957-50089217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
230, 5
               

               
Conread position:
               
293-512
               

               
Cow position:
               
chr15:10660574-10660357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
130, 139
               

               
Conread position:
               
294-530
               

               
Cow position:
               
chr15:39326535-39326299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
50, 110
               

               
Conread position:
               
294-548
               

               
Cow position:
               
chr15:23768275-23768032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
228, 137
               

               
Conread position:
               
296-512
               

               
Cow position:
               
chr15:47843267-47843054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
297-548
               

               
Cow position:
               
chr15:14870728-14870973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
297-548
               

               
Cow position:
               
chr15:20351817-20352060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
298-548
               

               
Cow position:
               
chr15:26404269-26404505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
301-548
               

               
Cow position:
               
chr15:35112894-35112647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
67, 59
               

               
Conread position:
               
308-545
               

               
Cow position:
               
chr15:23568131-23567893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
175, 128
               

               
Conread position:
               
309-542
               

               
Cow position:
               
chr15:12655919-12655690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
314-537
               

               
Cow position:
               
chr15:39436219-39436440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
114, 61
               

               
Conread position:
               
314-548
               

               
Cow position:
               
chr15:5729943-5730171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
45, 75
               

               
Conread position:
               
315-548
               

               
Cow position:
               
chr15:13387080-13387310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
319-545
               

               
Cow position:
               
chr15:18720321-18720538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
126, 60
               

               
Conread position:
               
319-547
               

               
Cow position:
               
chr15:13515373-13515598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
319-547
               

               
Cow position:
               
chr15:15880933-15881161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
124, 98
               

               
Conread position:
               
326-549
               

               
Cow position:
               
chr15:9526464-9526241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
147, 101
               

               
Conread position:
               
332-546
               

               
Cow position:
               
chr15:41620170-41619958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
141, 31
               

               
Conread position:
               
373-548
               

               
Cow position:
               
chr15:38877243-38877076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
374-548
               

               
Cow position:
               
chr15:19119549-19119373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
72, 57
               

               
Conread position:
               
374-548
               

               
Cow position:
               
chr15:41582971-41583141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
43, 18
               

               
Conread position:
               
379-546
               

               
Cow position:
               
chr15:15708047-15707882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
379-548
               

               
Cow position:
               
chr15:11646425-11646257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
387-546
               

               
Cow position:
               
chr15:23927399-23927238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
132, 42
               

               
Conread position:
               
387-548
               

               
Cow position:
               
chr15:10845794-10845953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
128, 42
               

               
Conread position:
               
388-545
               

               
Cow position:
               
chr15:36725102-36724952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
391-548
               

               
Cow position:
               
chr15:13684189-13684036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
392-546
               

               
Cow position:
               
chr15:23702859-23703003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
392-548
               

               
Cow position:
               
chr15:36782245-36782097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
392-548
               

               
Cow position:
               
chr15:40009574-40009419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
153, 38
               

               
Conread position:
               
392-549
               

               
Cow position:
               
chr15:6586637-6586485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
392-555
               

               
Cow position:
               
chr15:16936768-16936603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
127, 50
               

               
Conread position:
               
395-545
               

               
Cow position:
               
chr15:51632954-51632811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
124, 17
               

               
Conread position:
               
395-555
               

               
Cow position:
               
chr15:4534988-4535148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
124, 150
               

               
Conread position:
               
397-548
               

               
Cow position:
               
chr15:9871332-9871183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
398-548
               

               
Cow position:
               
chr15:45322867-45323017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
42, 76
               

               
Conread position:
               
403-548
               

               
Cow position:
               
chr15:20725526-20725385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
114, 29
               

               
Conread position:
               
426-548
               

               
Cow position:
               
chr15:49738936-49738814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
93, 16
               

               
Conread position:
               
433-548
               

               
Cow position:
               
chr15:34145040-34144924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
433-549
               

               
Cow position:
               
chr15:36773583-36773466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
43, 9
               

               
Conread position:
               
435-549
               

               
Cow position:
               
chr15:11363060-11362946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
439-548
               

               
Cow position:
               
chr15:19403100-19403212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
442-548
               

               
Cow position:
               
chr15:21522911-21523018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
77, 0
               
Show alignments to all cow chromosomes.