Cow genome map

Conread name: rtra22_d15r1.y1

Conread position: 135-545
Cow position:
Alignm length: 418
Alignm identity: 266
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 228, 18

Conread position: 146-548
Cow position:
Alignm length: 407
Alignm identity: 249
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 243, 28

Conread position: 147-546
Cow position:
Alignm length: 413
Alignm identity: 263
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 98, 22

Conread position: 151-524
Cow position:
Alignm length: 375
Alignm identity: 238
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 77, 14

Conread position: 152-358
Cow position:
Alignm length: 208
Alignm identity: 139
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 153-511
Cow position:
Alignm length: 368
Alignm identity: 231
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 15, 54

Conread position: 153-540
Cow position:
Alignm length: 394
Alignm identity: 260
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 19, 212

Conread position: 153-548
Cow position:
Alignm length: 409
Alignm identity: 273
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 17, 36

Conread position: 155-555
Cow position:
Alignm length: 401
Alignm identity: 262
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 24, 0

Conread position: 156-545
Cow position:
Alignm length: 396
Alignm identity: 262
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 18, 44

Conread position: 156-548
Cow position:
Alignm length: 394
Alignm identity: 249
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 158, 18

Conread position: 165-546
Cow position:
Alignm length: 382
Alignm identity: 256
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 111, 0

Conread position: 166-512
Cow position:
Alignm length: 351
Alignm identity: 225
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 17, 260

Conread position: 166-548
Cow position:
Alignm length: 384
Alignm identity: 262
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 355, 61

Conread position: 168-533
Cow position:
Alignm length: 367
Alignm identity: 232
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 351, 122

Conread position: 169-552
Cow position:
Alignm length: 385
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 26

Conread position: 170-350
Cow position:
Alignm length: 184
Alignm identity: 128
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 38, 123

Conread position: 170-498
Cow position:
Alignm length: 331
Alignm identity: 216
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 306, 29

Conread position: 174-548
Cow position:
Alignm length: 379
Alignm identity: 256
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 17, 133

Conread position: 174-548
Cow position:
Alignm length: 379
Alignm identity: 244
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 12, 224

Conread position: 176-356
Cow position:
Alignm length: 185
Alignm identity: 128
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 176-548
Cow position:
Alignm length: 375
Alignm identity: 251
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 25, 98

Conread position: 177-323
Cow position:
Alignm length: 147
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 177-546
Cow position:
Alignm length: 387
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 21

Conread position: 177-548
Cow position:
Alignm length: 389
Alignm identity: 251
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 27, 44

Conread position: 179-350
Cow position:
Alignm length: 172
Alignm identity: 122
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 106, 0

Conread position: 179-436
Cow position:
Alignm length: 264
Alignm identity: 176
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 92, 52

Conread position: 179-548
Cow position:
Alignm length: 377
Alignm identity: 258
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 13, 260

Conread position: 179-548
Cow position:
Alignm length: 374
Alignm identity: 245
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 270, 93

Conread position: 180-350
Cow position:
Alignm length: 171
Alignm identity: 122
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 180-358
Cow position:
Alignm length: 181
Alignm identity: 128
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 12, 97

Conread position: 180-435
Cow position:
Alignm length: 263
Alignm identity: 172
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 186, 116

Conread position: 180-512
Cow position:
Alignm length: 341
Alignm identity: 218
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 115, 30

Conread position: 180-523
Cow position:
Alignm length: 346
Alignm identity: 239
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 13, 179

Conread position: 180-546
Cow position:
Alignm length: 373
Alignm identity: 251
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 20, 50

Conread position: 180-548
Cow position:
Alignm length: 371
Alignm identity: 252
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 339, 92

Conread position: 180-548
Cow position:
Alignm length: 372
Alignm identity: 239
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 341, 30

Conread position: 180-548
Cow position:
Alignm length: 369
Alignm identity: 234
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 19, 0

Conread position: 181-531
Cow position:
Alignm length: 351
Alignm identity: 227
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 98, 0

Conread position: 181-547
Cow position:
Alignm length: 371
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 89

Conread position: 181-581
Cow position:
Alignm length: 407
Alignm identity: 263
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 338, 18

Conread position: 182-358
Cow position:
Alignm length: 179
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 67, 15

Conread position: 182-471
Cow position:
Alignm length: 291
Alignm identity: 192
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 254, 93

Conread position: 182-530
Cow position:
Alignm length: 351
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 15

Conread position: 182-547
Cow position:
Alignm length: 369
Alignm identity: 247
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 19, 95

Conread position: 183-507
Cow position:
Alignm length: 333
Alignm identity: 217
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 86, 15

Conread position: 183-548
Cow position:
Alignm length: 368
Alignm identity: 253
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 9, 128

Conread position: 183-548
Cow position:
Alignm length: 368
Alignm identity: 246
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 10, 45

Conread position: 184-548
Cow position:
Alignm length: 373
Alignm identity: 245
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 12, 176

Conread position: 184-548
Cow position:
Alignm length: 374
Alignm identity: 254
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 21, 69

Conread position: 184-548
Cow position:
Alignm length: 370
Alignm identity: 252
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 9, 103

Conread position: 187-349
Cow position:
Alignm length: 163
Alignm identity: 120
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 187-546
Cow position:
Alignm length: 374
Alignm identity: 251
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 85, 40

Conread position: 188-414
Cow position:
Alignm length: 230
Alignm identity: 153
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 10, 187

Conread position: 188-430
Cow position:
Alignm length: 245
Alignm identity: 165
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 10, 149

Conread position: 188-513
Cow position:
Alignm length: 342
Alignm identity: 227
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 83, 261

Conread position: 188-519
Cow position:
Alignm length: 337
Alignm identity: 225
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 124, 39

Conread position: 190-436
Cow position:
Alignm length: 247
Alignm identity: 167
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 9, 0

Conread position: 190-538
Cow position:
Alignm length: 356
Alignm identity: 244
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 13, 80

Conread position: 191-349
Cow position:
Alignm length: 159
Alignm identity: 119
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 191-451
Cow position:
Alignm length: 261
Alignm identity: 171
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 87, 0

Conread position: 191-546
Cow position:
Alignm length: 357
Alignm identity: 239
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 218, 92

Conread position: 191-548
Cow position:
Alignm length: 358
Alignm identity: 242
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 46, 0

Conread position: 191-549
Cow position:
Alignm length: 363
Alignm identity: 239
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 282, 86

Conread position: 192-489
Cow position:
Alignm length: 303
Alignm identity: 194
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 139, 244

Conread position: 192-525
Cow position:
Alignm length: 334
Alignm identity: 208
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 109, 0

Conread position: 192-547
Cow position:
Alignm length: 356
Alignm identity: 233
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 83, 0

Conread position: 193-384
Cow position:
Alignm length: 193
Alignm identity: 134
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 187, 179

Conread position: 195-548
Cow position:
Alignm length: 361
Alignm identity: 236
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 10, 80

Conread position: 198-357
Cow position:
Alignm length: 160
Alignm identity: 120
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 74, 0

Conread position: 198-548
Cow position:
Alignm length: 351
Alignm identity: 236
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 70, 0

Conread position: 199-358
Cow position:
Alignm length: 160
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 199-519
Cow position:
Alignm length: 328
Alignm identity: 210
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 63, 115

Conread position: 199-538
Cow position:
Alignm length: 348
Alignm identity: 224
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 186, 73

Conread position: 199-540
Cow position:
Alignm length: 345
Alignm identity: 221
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 324, 218

Conread position: 199-545
Cow position:
Alignm length: 347
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 199-548
Cow position:
Alignm length: 362
Alignm identity: 234
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 86, 31

Conread position: 199-548
Cow position:
Alignm length: 350
Alignm identity: 239
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 76, 0

Conread position: 199-548
Cow position:
Alignm length: 350
Alignm identity: 235
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 71, 0

Conread position: 199-548
Cow position:
Alignm length: 360
Alignm identity: 235
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 60, 27

Conread position: 199-549
Cow position:
Alignm length: 354
Alignm identity: 225
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 176, 73

Conread position: 199-549
Cow position:
Alignm length: 366
Alignm identity: 237
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 96, 62

Conread position: 199-553
Cow position:
Alignm length: 360
Alignm identity: 229
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 164, 78

Conread position: 199-555
Cow position:
Alignm length: 358
Alignm identity: 241
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 319, 81

Conread position: 200-468
Cow position:
Alignm length: 269
Alignm identity: 176
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 85, 0

Conread position: 200-548
Cow position:
Alignm length: 354
Alignm identity: 243
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 198, 185

Conread position: 200-549
Cow position:
Alignm length: 353
Alignm identity: 231
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 154, 72

Conread position: 201-548
Cow position:
Alignm length: 353
Alignm identity: 242
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 154, 33

Conread position: 202-540
Cow position:
Alignm length: 344
Alignm identity: 226
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 83, 123

Conread position: 202-547
Cow position:
Alignm length: 350
Alignm identity: 228
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 13, 104

Conread position: 203-517
Cow position:
Alignm length: 316
Alignm identity: 215
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 90, 69

Conread position: 203-544
Cow position:
Alignm length: 342
Alignm identity: 237
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 73, 0

Conread position: 203-546
Cow position:
Alignm length: 344
Alignm identity: 226
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 69, 0

Conread position: 203-548
Cow position:
Alignm length: 347
Alignm identity: 228
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 310, 69

Conread position: 203-548
Cow position:
Alignm length: 346
Alignm identity: 223
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 72, 0

Conread position: 203-549
Cow position:
Alignm length: 351
Alignm identity: 232
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 95, 24

Conread position: 205-549
Cow position:
Alignm length: 345
Alignm identity: 233
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 70, 0

Conread position: 206-546
Cow position:
Alignm length: 343
Alignm identity: 234
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 159, 66

Conread position: 213-544
Cow position:
Alignm length: 337
Alignm identity: 223
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 90, 108

Conread position: 213-548
Cow position:
Alignm length: 336
Alignm identity: 217
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 14, 0

Conread position: 214-548
Cow position:
Alignm length: 338
Alignm identity: 225
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 51, 148

Conread position: 216-548
Cow position:
Alignm length: 340
Alignm identity: 243
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 142, 52

Conread position: 216-550
Cow position:
Alignm length: 337
Alignm identity: 231
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 158, 14

Conread position: 220-434
Cow position:
Alignm length: 217
Alignm identity: 142
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 131, 0

Conread position: 231-539
Cow position:
Alignm length: 313
Alignm identity: 209
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 170, 35

Conread position: 234-546
Cow position:
Alignm length: 315
Alignm identity: 209
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 285, 59

Conread position: 241-548
Cow position:
Alignm length: 317
Alignm identity: 216
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 20, 31

Conread position: 260-548
Cow position:
Alignm length: 291
Alignm identity: 199
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 103, 7

Conread position: 268-548
Cow position:
Alignm length: 281
Alignm identity: 187
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 173, 0

Conread position: 268-548
Cow position:
Alignm length: 283
Alignm identity: 182
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 35, 93

Conread position: 280-548
Cow position:
Alignm length: 274
Alignm identity: 185
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 95, 49

Conread position: 281-529
Cow position:
Alignm length: 254
Alignm identity: 174
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 17, 155

Conread position: 284-523
Cow position:
Alignm length: 240
Alignm identity: 163
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 284-545
Cow position:
Alignm length: 264
Alignm identity: 186
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 235, 9

Conread position: 284-546
Cow position:
Alignm length: 268
Alignm identity: 182
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 63, 77

Conread position: 284-548
Cow position:
Alignm length: 269
Alignm identity: 182
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 92, 76

Conread position: 284-548
Cow position:
Alignm length: 268
Alignm identity: 182
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 41, 78

Conread position: 284-548
Cow position:
Alignm length: 267
Alignm identity: 185
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 147, 134

Conread position: 285-548
Cow position:
Alignm length: 267
Alignm identity: 184
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 163, 80

Conread position: 286-513
Cow position:
Alignm length: 232
Alignm identity: 157
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 90, 79

Conread position: 287-548
Cow position:
Alignm length: 263
Alignm identity: 180
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 232, 7

Conread position: 293-548
Cow position:
Alignm length: 260
Alignm identity: 173
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 211, 143

Conread position: 294-548
Cow position:
Alignm length: 256
Alignm identity: 167
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 225, 62

Conread position: 294-555
Cow position:
Alignm length: 265
Alignm identity: 177
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 221, 135

Conread position: 297-544
Cow position:
Alignm length: 249
Alignm identity: 166
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 99, 82

Conread position: 297-548
Cow position:
Alignm length: 254
Alignm identity: 179
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 218, 63

Conread position: 297-548
Cow position:
Alignm length: 252
Alignm identity: 170
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 134, 0

Conread position: 297-548
Cow position:
Alignm length: 252
Alignm identity: 162
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 144, 0

Conread position: 298-546
Cow position:
Alignm length: 249
Alignm identity: 173
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 93, 0

Conread position: 309-545
Cow position:
Alignm length: 241
Alignm identity: 165
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 120, 16

Conread position: 309-548
Cow position:
Alignm length: 241
Alignm identity: 164
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 167, 32

Conread position: 314-549
Cow position:
Alignm length: 240
Alignm identity: 164
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 96, 106

Conread position: 331-548
Cow position:
Alignm length: 220
Alignm identity: 155
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 188, 99

Conread position: 373-548
Cow position:
Alignm length: 180
Alignm identity: 126
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 74, 39

Conread position: 375-548
Cow position:
Alignm length: 176
Alignm identity: 123
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 151, 56

Conread position: 375-548
Cow position:
Alignm length: 176
Alignm identity: 123
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 151, 56

Conread position: 388-548
Cow position:
Alignm length: 163
Alignm identity: 128
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 144, 44

Conread position: 391-548
Cow position:
Alignm length: 160
Alignm identity: 114
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 40, 52

Conread position: 391-548
Cow position:
Alignm length: 159
Alignm identity: 122
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 143, 0

Conread position: 403-531
Cow position:
Alignm length: 129
Alignm identity: 100
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 403-546
Cow position:
Alignm length: 144
Alignm identity: 110
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 418-546
Cow position:
Alignm length: 130
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 101, 0

Conread position: 421-548
Cow position:
Alignm length: 128
Alignm identity: 103
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 16, 0

Conread position: 425-548
Cow position:
Alignm length: 124
Alignm identity: 103
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 12, 0

Show alignments to all cow chromosomes.