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Cow genome map

           
Conread name:
           
rtra25_l14r1.y1
        

               
Conread position:
               
236-463
               

               
Cow position:
               
chr14:109712-109494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
113, 16
               

               
Conread position:
               
243-483
               

               
Cow position:
               
chr14:40754466-40754229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
106, 27
               

               
Conread position:
               
252-468
               

               
Cow position:
               
chr14:8949427-8949651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
30, 69
               

               
Conread position:
               
255-499
               

               
Cow position:
               
chr14:24416675-24416904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
31, 60
               

               
Conread position:
               
266-468
               

               
Cow position:
               
chr14:9510336-9510544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
45, 18
               

               
Conread position:
               
266-483
               

               
Cow position:
               
chr14:19852143-19851918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
83, 16
               

               
Conread position:
               
274-498
               

               
Cow position:
               
chr14:5668319-5668093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
28, 11
               

               
Conread position:
               
274-498
               

               
Cow position:
               
chr14:41253177-41252958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
73, 38
               

               
Conread position:
               
274-503
               

               
Cow position:
               
chr14:20736416-20736641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
82, 8
               

               
Conread position:
               
277-468
               

               
Cow position:
               
chr14:27608980-27609172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
278-468
               

               
Cow position:
               
chr14:8591036-8590847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
71, 20
               

               
Conread position:
               
278-503
               

               
Cow position:
               
chr14:10609485-10609710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
76, 27
               

               
Conread position:
               
279-482
               

               
Cow position:
               
chr14:24880795-24880592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
12, 69
               

               
Conread position:
               
281-503
               

               
Cow position:
               
chr14:29734558-29734334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
22, 93
               

               
Conread position:
               
282-490
               

               
Cow position:
               
chr14:3923725-3923932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
110, 36
               

               
Conread position:
               
283-468
               

               
Cow position:
               
chr14:10851837-10852034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
63, 15
               

               
Conread position:
               
284-502
               

               
Cow position:
               
chr14:31177471-31177258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
42, 12
               

               
Conread position:
               
284-503
               

               
Cow position:
               
chr14:7316605-7316826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
63, 19
               

               
Conread position:
               
285-456
               

               
Cow position:
               
chr14:21946205-21946381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
285-458
               

               
Cow position:
               
chr14:5044484-5044662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
285-463
               

               
Cow position:
               
chr14:35381393-35381587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
10, 164
               

               
Conread position:
               
285-468
               

               
Cow position:
               
chr14:38747490-38747679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
62, 34
               

               
Conread position:
               
285-493
               

               
Cow position:
               
chr14:42155158-42154952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
39, 179
               

               
Conread position:
               
285-494
               

               
Cow position:
               
chr14:19832584-19832364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
25, 36
               

               
Conread position:
               
285-503
               

               
Cow position:
               
chr14:1708849-1708626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
34, 13
               

               
Conread position:
               
285-503
               

               
Cow position:
               
chr14:26442536-26442313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
64, 199
               

               
Conread position:
               
286-456
               

               
Cow position:
               
chr14:49555385-49555220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
62, 17
               

               
Conread position:
               
286-462
               

               
Cow position:
               
chr14:20667194-20667013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
36, 17
               

               
Conread position:
               
286-468
               

               
Cow position:
               
chr14:37152126-37151939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
32, 156
               

               
Conread position:
               
286-502
               

               
Cow position:
               
chr14:18270168-18270390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
29, 10
               

               
Conread position:
               
287-466
               

               
Cow position:
               
chr14:24746266-24746465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
287-497
               

               
Cow position:
               
chr14:4481488-4481695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
61, 31
               

               
Conread position:
               
288-458
               

               
Cow position:
               
chr14:28304974-28304794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
35, 23
               

               
Conread position:
               
288-467
               

               
Cow position:
               
chr14:20110908-20110722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
12, 31
               

               
Conread position:
               
289-467
               

               
Cow position:
               
chr14:19827658-19827484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
59, 106
               

               
Conread position:
               
289-468
               

               
Cow position:
               
chr14:23078980-23078791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
289-468
               

               
Cow position:
               
chr14:33618126-33618304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
57, 26
               

               
Conread position:
               
289-499
               

               
Cow position:
               
chr14:12512072-12511863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
186, 41
               

               
Conread position:
               
289-503
               

               
Cow position:
               
chr14:23682083-23682293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
60, 14
               

               
Conread position:
               
289-503
               

               
Cow position:
               
chr14:31228275-31228056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
31, 44
               

               
Conread position:
               
290-498
               

               
Cow position:
               
chr14:16256587-16256791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
33, 102
               

               
Conread position:
               
291-461
               

               
Cow position:
               
chr14:23104182-23104004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
291-488
               

               
Cow position:
               
chr14:1432001-1431806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
185, 14
               

               
Conread position:
               
291-499
               

               
Cow position:
               
chr14:46977789-46977585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
18, 100
               

               
Conread position:
               
293-437
               

               
Cow position:
               
chr14:20011628-20011770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
14, 10
               

               
Conread position:
               
293-463
               

               
Cow position:
               
chr14:49940834-49941007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
54, 21
               

               
Conread position:
               
294-468
               

               
Cow position:
               
chr14:12244562-12244384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
55, 9
               

               
Conread position:
               
294-503
               

               
Cow position:
               
chr14:20640809-20640600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
55, 25
               

               
Conread position:
               
294-503
               

               
Cow position:
               
chr14:24785476-24785688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
24, 179
               

               
Conread position:
               
295-503
               

               
Cow position:
               
chr14:13845817-13846015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
97, 19
               

               
Conread position:
               
296-503
               

               
Cow position:
               
chr14:7198318-7198528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
53, 22
               

               
Conread position:
               
297-448
               

               
Cow position:
               
chr14:12546734-12546575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
297-455
               

               
Cow position:
               
chr14:39770398-39770239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
50, 22
               

               
Conread position:
               
297-463
               

               
Cow position:
               
chr14:20932444-20932610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
20, 105
               

               
Conread position:
               
297-463
               

               
Cow position:
               
chr14:24921916-24922096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
297-463
               

               
Cow position:
               
chr14:48772740-48772900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
297-468
               

               
Cow position:
               
chr14:48838415-48838596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
50, 21
               

               
Conread position:
               
298-427
               

               
Cow position:
               
chr14:30024846-30024979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
51, 59
               

               
Conread position:
               
298-429
               

               
Cow position:
               
chr14:33462028-33462162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
17, 102
               

               
Conread position:
               
298-459
               

               
Cow position:
               
chr14:12137835-12138009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
298-460
               

               
Cow position:
               
chr14:23237840-23237677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
20, 47
               

               
Conread position:
               
298-463
               

               
Cow position:
               
chr14:19355116-19355283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
48, 21
               

               
Conread position:
               
298-463
               

               
Cow position:
               
chr14:31893412-31893576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
94, 51
               

               
Conread position:
               
298-466
               

               
Cow position:
               
chr14:48745545-48745376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
298-468
               

               
Cow position:
               
chr14:13042581-13042759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
298-478
               

               
Cow position:
               
chr14:47224549-47224354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
298-499
               

               
Cow position:
               
chr14:36289965-36289763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
48, 20
               

               
Conread position:
               
298-503
               

               
Cow position:
               
chr14:35651958-35651755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
12, 146
               

               
Conread position:
               
298-503
               

               
Cow position:
               
chr14:41210693-41210885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
128, 7
               

               
Conread position:
               
298-503
               

               
Cow position:
               
chr14:45677053-45677260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
15, 179
               

               
Conread position:
               
299-449
               

               
Cow position:
               
chr14:21427396-21427244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
299-457
               

               
Cow position:
               
chr14:40212089-40212247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
19, 75
               

               
Conread position:
               
299-463
               

               
Cow position:
               
chr14:8541382-8541216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
50, 15
               

               
Conread position:
               
299-468
               

               
Cow position:
               
chr14:21357381-21357559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
299-468
               

               
Cow position:
               
chr14:31130555-31130374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
26, 138
               

               
Conread position:
               
299-503
               

               
Cow position:
               
chr14:19618918-19618721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
88, 20
               

               
Conread position:
               
299-503
               

               
Cow position:
               
chr14:41156897-41156694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
14, 175
               

               
Conread position:
               
300-463
               

               
Cow position:
               
chr14:36559404-36559230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
300-468
               

               
Cow position:
               
chr14:23442851-23443023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
49, 104
               

               
Conread position:
               
300-499
               

               
Cow position:
               
chr14:18301780-18301987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
15, 50
               

               
Conread position:
               
300-502
               

               
Cow position:
               
chr14:16550166-16549974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
103, 15
               

               
Conread position:
               
300-502
               

               
Cow position:
               
chr14:41838032-41837843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
5, 19
               

               
Conread position:
               
300-503
               

               
Cow position:
               
chr14:4848174-4848377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
8, 46
               

               
Conread position:
               
300-503
               

               
Cow position:
               
chr14:16524297-16524503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
42, 18
               

               
Conread position:
               
301-467
               

               
Cow position:
               
chr14:44751196-44751027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
80, 40
               

               
Conread position:
               
302-503
               

               
Cow position:
               
chr14:15428305-15428508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
47, 175
               

               
Conread position:
               
303-463
               

               
Cow position:
               
chr14:32784287-32784119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
40, 11
               

               
Conread position:
               
303-486
               

               
Cow position:
               
chr14:47170522-47170333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
303-487
               

               
Cow position:
               
chr14:36151152-36151345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
46, 174
               

               
Conread position:
               
305-458
               

               
Cow position:
               
chr14:21968679-21968518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
305-461
               

               
Cow position:
               
chr14:2852980-2853144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
305-462
               

               
Cow position:
               
chr14:39918905-39918752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
41, 20
               

               
Conread position:
               
305-463
               

               
Cow position:
               
chr14:40230808-40230639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
305-465
               

               
Cow position:
               
chr14:11079284-11079450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
305-467
               

               
Cow position:
               
chr14:11604714-11604882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
305-468
               

               
Cow position:
               
chr14:2959354-2959525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
86, 42
               

               
Conread position:
               
305-468
               

               
Cow position:
               
chr14:15470157-15469980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
305-468
               

               
Cow position:
               
chr14:23424095-23424262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
44, 99
               

               
Conread position:
               
305-468
               

               
Cow position:
               
chr14:41267890-41267731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
44, 13
               

               
Conread position:
               
305-468
               

               
Cow position:
               
chr14:41623155-41623319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
17, 92
               

               
Conread position:
               
305-478
               

               
Cow position:
               
chr14:20826320-20826502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
18, 135
               

               
Conread position:
               
305-479
               

               
Cow position:
               
chr14:21593174-21592991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
305-489
               

               
Cow position:
               
chr14:11056903-11056710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
41, 29
               

               
Conread position:
               
305-499
               

               
Cow position:
               
chr14:18412767-18412565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
18, 174
               

               
Conread position:
               
305-500
               

               
Cow position:
               
chr14:27364410-27364616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
44, 13
               

               
Conread position:
               
305-502
               

               
Cow position:
               
chr14:12073127-12072927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
18, 167
               

               
Conread position:
               
305-502
               

               
Cow position:
               
chr14:18559224-18559032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
38, 13
               

               
Conread position:
               
305-503
               

               
Cow position:
               
chr14:11576899-11577098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
44, 144
               

               
Conread position:
               
305-503
               

               
Cow position:
               
chr14:11643416-11643220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
45, 162
               

               
Conread position:
               
305-503
               

               
Cow position:
               
chr14:13731268-13731068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
21, 172
               

               
Conread position:
               
305-503
               

               
Cow position:
               
chr14:36425576-36425377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
13, 166
               

               
Conread position:
               
306-403
               

               
Cow position:
               
chr14:19960272-19960175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
83, 11
               

               
Conread position:
               
306-463
               

               
Cow position:
               
chr14:20234362-20234197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
306-466
               

               
Cow position:
               
chr14:3194706-3194865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
98, 12
               

               
Conread position:
               
306-467
               

               
Cow position:
               
chr14:18345895-18345728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
306-500
               

               
Cow position:
               
chr14:9307897-9308092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
85, 165
               

               
Conread position:
               
306-502
               

               
Cow position:
               
chr14:12033414-12033212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
43, 142
               

               
Conread position:
               
306-503
               

               
Cow position:
               
chr14:6541898-6541694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
12, 176
               

               
Conread position:
               
306-503
               

               
Cow position:
               
chr14:36254862-36254666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
13, 92
               

               
Conread position:
               
306-503
               

               
Cow position:
               
chr14:40191430-40191615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
83, 38
               

               
Conread position:
               
307-463
               

               
Cow position:
               
chr14:26655305-26655138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
307-468
               

               
Cow position:
               
chr14:13385200-13385369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
40, 11
               

               
Conread position:
               
307-476
               

               
Cow position:
               
chr14:10858272-10858442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
42, 57
               

               
Conread position:
               
307-503
               

               
Cow position:
               
chr14:15997921-15997735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
16, 81
               

               
Conread position:
               
308-468
               

               
Cow position:
               
chr14:49824780-49824618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
308-503
               

               
Cow position:
               
chr14:2038953-2038778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
308-503
               

               
Cow position:
               
chr14:35503197-35503392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
40, 9
               

               
Conread position:
               
309-503
               

               
Cow position:
               
chr14:36443183-36442988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
40, 163
               

               
Conread position:
               
310-468
               

               
Cow position:
               
chr14:33247585-33247428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
39, 79
               

               
Conread position:
               
311-441
               

               
Cow position:
               
chr14:10693756-10693622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
311-468
               

               
Cow position:
               
chr14:19633082-19633229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
311-497
               

               
Cow position:
               
chr14:20466771-20466959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
13, 167
               

               
Conread position:
               
311-503
               

               
Cow position:
               
chr14:10078090-10078298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
38, 179
               

               
Conread position:
               
311-503
               

               
Cow position:
               
chr14:41191262-41191065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
38, 169
               

               
Conread position:
               
312-468
               

               
Cow position:
               
chr14:445133-445288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
37, 90
               

               
Conread position:
               
312-499
               

               
Cow position:
               
chr14:21535466-21535280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
36, 163
               

               
Conread position:
               
313-497
               

               
Cow position:
               
chr14:1796035-1796225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
75, 40
               

               
Conread position:
               
313-503
               

               
Cow position:
               
chr14:41749919-41749729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
9, 158
               

               
Conread position:
               
314-445
               

               
Cow position:
               
chr14:8688676-8688541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
34, 120
               

               
Conread position:
               
314-467
               

               
Cow position:
               
chr14:8707395-8707552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
314-468
               

               
Cow position:
               
chr14:8923748-8923583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
314-468
               

               
Cow position:
               
chr14:37504351-37504516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
314-469
               

               
Cow position:
               
chr14:2712167-2712020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
314-492
               

               
Cow position:
               
chr14:10721863-10721681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
314-499
               

               
Cow position:
               
chr14:1868949-1868764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
35, 68
               

               
Conread position:
               
314-499
               

               
Cow position:
               
chr14:10937509-10937699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
34, 132
               

               
Conread position:
               
314-501
               

               
Cow position:
               
chr14:27847195-27847386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
32, 151
               

               
Conread position:
               
314-502
               

               
Cow position:
               
chr14:24236660-24236854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
9, 167
               

               
Conread position:
               
314-503
               

               
Cow position:
               
chr14:24387290-24387477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
314-503
               

               
Cow position:
               
chr14:33328804-33328989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
85, 154
               

               
Conread position:
               
315-462
               

               
Cow position:
               
chr14:25381286-25381425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
316-468
               

               
Cow position:
               
chr14:15228386-15228541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
30, 13
               

               
Conread position:
               
316-501
               

               
Cow position:
               
chr14:10706719-10706903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
33, 159
               

               
Conread position:
               
319-467
               

               
Cow position:
               
chr14:4838414-4838267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
23, 48
               

               
Conread position:
               
319-468
               

               
Cow position:
               
chr14:25912498-25912652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
319-496
               

               
Cow position:
               
chr14:21224487-21224665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
30, 104
               

               
Conread position:
               
319-499
               

               
Cow position:
               
chr14:22988879-22989060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
30, 157
               

               
Conread position:
               
319-503
               

               
Cow position:
               
chr14:11729263-11729080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
30, 157
               

               
Conread position:
               
319-503
               

               
Cow position:
               
chr14:33791037-33791218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
24, 116
               

               
Conread position:
               
319-503
               

               
Cow position:
               
chr14:36775507-36775679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
30, 73
               

               
Conread position:
               
320-503
               

               
Cow position:
               
chr14:19188898-19189074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
29, 23
               

               
Conread position:
               
321-468
               

               
Cow position:
               
chr14:27823278-27823433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
69, 112
               

               
Conread position:
               
322-462
               

               
Cow position:
               
chr14:5630015-5630157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
27, 85
               

               
Conread position:
               
322-462
               

               
Cow position:
               
chr14:24845826-24845962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
27, 69
               

               
Conread position:
               
322-463
               

               
Cow position:
               
chr14:18112744-18112597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
322-464
               

               
Cow position:
               
chr14:8101649-8101790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
60, 22
               

               
Conread position:
               
322-468
               

               
Cow position:
               
chr14:12954528-12954384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
25, 61
               

               
Conread position:
               
322-468
               

               
Cow position:
               
chr14:40806751-40806610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
20, 73
               

               
Conread position:
               
322-499
               

               
Cow position:
               
chr14:8786690-8786524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
26, 67
               

               
Conread position:
               
322-500
               

               
Cow position:
               
chr14:15492438-15492621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
67, 152
               

               
Conread position:
               
322-502
               

               
Cow position:
               
chr14:18309453-18309278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
19, 75
               

               
Conread position:
               
322-502
               

               
Cow position:
               
chr14:33714827-33714649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
27, 123
               

               
Conread position:
               
322-503
               

               
Cow position:
               
chr14:24945647-24945461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
63, 154
               

               
Conread position:
               
322-503
               

               
Cow position:
               
chr14:25903379-25903561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
27, 154
               

               
Conread position:
               
323-463
               

               
Cow position:
               
chr14:48426920-48427070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
323-466
               

               
Cow position:
               
chr14:21530224-21530074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
74, 18
               

               
Conread position:
               
325-468
               

               
Cow position:
               
chr14:2759283-2759135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
332-468
               

               
Cow position:
               
chr14:1646327-1646182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
341-499
               

               
Cow position:
               
chr14:47673009-47672855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
18, 126
               

               
Conread position:
               
345-463
               

               
Cow position:
               
chr14:25277646-25277766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
345-468
               

               
Cow position:
               
chr14:11280240-11280112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
345-483
               

               
Cow position:
               
chr14:12617621-12617481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
346-503
               

               
Cow position:
               
chr14:16760273-16760430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
47, 129
               

               
Conread position:
               
369-503
               

               
Cow position:
               
chr14:33751436-33751565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
25, 98
               

               
Conread position:
               
381-503
               

               
Cow position:
               
chr14:28706957-28707077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
22, 92
               
Show alignments to all cow chromosomes.