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Cow genome map

           
Conread name:
           
rtra25_l14r1.y1
        

               
Conread position:
               
249-498
               

               
Cow position:
               
chr2:66561771-66562023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
23, 35
               

               
Conread position:
               
262-467
               

               
Cow position:
               
chr2:45895521-45895318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
18, 63
               

               
Conread position:
               
264-468
               

               
Cow position:
               
chr2:38884164-38884381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
266-440
               

               
Cow position:
               
chr2:15720877-15720705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
135, 32
               

               
Conread position:
               
266-449
               

               
Cow position:
               
chr2:11806817-11806630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
54, 10
               

               
Conread position:
               
267-492
               

               
Cow position:
               
chr2:24393440-24393676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
17, 12
               

               
Conread position:
               
269-501
               

               
Cow position:
               
chr2:38913729-38913491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
13, 26
               

               
Conread position:
               
270-503
               

               
Cow position:
               
chr2:32840377-32840599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
133, 8
               

               
Conread position:
               
271-468
               

               
Cow position:
               
chr2:42897913-42897707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
7, 48
               

               
Conread position:
               
271-503
               

               
Cow position:
               
chr2:9476196-9476423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
13, 34
               

               
Conread position:
               
272-463
               

               
Cow position:
               
chr2:47784844-47784652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
10, 26
               

               
Conread position:
               
272-499
               

               
Cow position:
               
chr2:76110637-76110413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
29, 48
               

               
Conread position:
               
273-503
               

               
Cow position:
               
chr2:12949920-12950152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
70, 10
               

               
Conread position:
               
274-466
               

               
Cow position:
               
chr2:19843029-19842832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
23, 5
               

               
Conread position:
               
274-499
               

               
Cow position:
               
chr2:33553933-33554153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
28, 38
               

               
Conread position:
               
274-501
               

               
Cow position:
               
chr2:43591129-43591358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
8, 186
               

               
Conread position:
               
274-503
               

               
Cow position:
               
chr2:46188856-46189083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
70, 15
               

               
Conread position:
               
275-503
               

               
Cow position:
               
chr2:13672758-13672537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
14, 29
               

               
Conread position:
               
276-458
               

               
Cow position:
               
chr2:51417066-51417247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
16, 42
               

               
Conread position:
               
277-458
               

               
Cow position:
               
chr2:1205549-1205356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
277-468
               

               
Cow position:
               
chr2:46125898-46126095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
46, 16
               

               
Conread position:
               
277-488
               

               
Cow position:
               
chr2:52466210-52466431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
15, 27
               

               
Conread position:
               
278-503
               

               
Cow position:
               
chr2:24126887-24126651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
279-462
               

               
Cow position:
               
chr2:18589297-18589486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
19, 27
               

               
Conread position:
               
279-500
               

               
Cow position:
               
chr2:53650250-53650040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
102, 5
               

               
Conread position:
               
280-503
               

               
Cow position:
               
chr2:24217984-24218203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
69, 18
               

               
Conread position:
               
282-453
               

               
Cow position:
               
chr2:13722119-13721949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
282-462
               

               
Cow position:
               
chr2:18243767-18243586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
111, 38
               

               
Conread position:
               
282-468
               

               
Cow position:
               
chr2:44051539-44051350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
67, 21
               

               
Conread position:
               
282-499
               

               
Cow position:
               
chr2:44215733-44215520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
61, 23
               

               
Conread position:
               
282-503
               

               
Cow position:
               
chr2:46052736-46052513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
64, 196
               

               
Conread position:
               
284-463
               

               
Cow position:
               
chr2:52151032-52151208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
30, 68
               

               
Conread position:
               
284-489
               

               
Cow position:
               
chr2:2486078-2485871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
14, 36
               

               
Conread position:
               
284-503
               

               
Cow position:
               
chr2:39590489-39590271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
27, 12
               

               
Conread position:
               
284-503
               

               
Cow position:
               
chr2:69419351-69419572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
42, 189
               

               
Conread position:
               
284-503
               

               
Cow position:
               
chr2:71487011-71486791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
40, 188
               

               
Conread position:
               
285-463
               

               
Cow position:
               
chr2:42255663-42255482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
63, 115
               

               
Conread position:
               
285-485
               

               
Cow position:
               
chr2:31529717-31529511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
104, 68
               

               
Conread position:
               
285-495
               

               
Cow position:
               
chr2:48784827-48785044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
39, 12
               

               
Conread position:
               
285-503
               

               
Cow position:
               
chr2:63331587-63331791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
155, 20
               

               
Conread position:
               
286-461
               

               
Cow position:
               
chr2:70449254-70449072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
286-462
               

               
Cow position:
               
chr2:30127059-30127242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
20, 33
               

               
Conread position:
               
286-485
               

               
Cow position:
               
chr2:80770335-80770138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
37, 61
               

               
Conread position:
               
286-490
               

               
Cow position:
               
chr2:23713112-23712892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
286-503
               

               
Cow position:
               
chr2:14709896-14710107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
61, 28
               

               
Conread position:
               
286-503
               

               
Cow position:
               
chr2:28301434-28301218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
37, 166
               

               
Conread position:
               
286-503
               

               
Cow position:
               
chr2:80275060-80275280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
38, 189
               

               
Conread position:
               
287-461
               

               
Cow position:
               
chr2:1036156-1036340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
17, 33
               

               
Conread position:
               
287-463
               

               
Cow position:
               
chr2:15400717-15400901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
35, 18
               

               
Conread position:
               
287-485
               

               
Cow position:
               
chr2:7194436-7194233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
62, 39
               

               
Conread position:
               
287-494
               

               
Cow position:
               
chr2:39501264-39501061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
30, 65
               

               
Conread position:
               
287-503
               

               
Cow position:
               
chr2:40484272-40484496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
38, 196
               

               
Conread position:
               
287-503
               

               
Cow position:
               
chr2:43995159-43994948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 18
               

               
Conread position:
               
288-485
               

               
Cow position:
               
chr2:19025420-19025219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
61, 108
               

               
Conread position:
               
288-502
               

               
Cow position:
               
chr2:24635100-24634894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
9, 18
               

               
Conread position:
               
289-467
               

               
Cow position:
               
chr2:40373178-40373358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
60, 84
               

               
Conread position:
               
289-468
               

               
Cow position:
               
chr2:39350257-39350448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
289-468
               

               
Cow position:
               
chr2:46262662-46262483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
105, 56
               

               
Conread position:
               
289-468
               

               
Cow position:
               
chr2:53567715-53567530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
22, 133
               

               
Conread position:
               
289-503
               

               
Cow position:
               
chr2:79737-79945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
59, 21
               

               
Conread position:
               
289-503
               

               
Cow position:
               
chr2:13468442-13468228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
59, 29
               

               
Conread position:
               
289-503
               

               
Cow position:
               
chr2:46033561-46033348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
7, 26
               

               
Conread position:
               
289-503
               

               
Cow position:
               
chr2:52484739-52484953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
108, 23
               

               
Conread position:
               
290-457
               

               
Cow position:
               
chr2:3728247-3728079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
6, 25
               

               
Conread position:
               
290-493
               

               
Cow position:
               
chr2:40489030-40488829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
103, 59
               

               
Conread position:
               
290-497
               

               
Cow position:
               
chr2:42608292-42608085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
18, 29
               

               
Conread position:
               
290-498
               

               
Cow position:
               
chr2:74078890-74079099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
97, 21
               

               
Conread position:
               
290-499
               

               
Cow position:
               
chr2:21049107-21049320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
290-499
               

               
Cow position:
               
chr2:71621819-71622030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
32, 182
               

               
Conread position:
               
290-503
               

               
Cow position:
               
chr2:37121481-37121277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
113, 28
               

               
Conread position:
               
291-455
               

               
Cow position:
               
chr2:46239968-46240131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
112, 23
               

               
Conread position:
               
291-461
               

               
Cow position:
               
chr2:37920537-37920711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
58, 28
               

               
Conread position:
               
291-461
               

               
Cow position:
               
chr2:75562233-75562056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
98, 14
               

               
Conread position:
               
291-503
               

               
Cow position:
               
chr2:8821472-8821245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
17, 200
               

               
Conread position:
               
291-503
               

               
Cow position:
               
chr2:21950201-21949988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
24, 179
               

               
Conread position:
               
291-503
               

               
Cow position:
               
chr2:39067723-39067510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
11, 74
               

               
Conread position:
               
292-458
               

               
Cow position:
               
chr2:58306010-58306168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
7, 28
               

               
Conread position:
               
293-463
               

               
Cow position:
               
chr2:6039240-6039060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
56, 142
               

               
Conread position:
               
293-463
               

               
Cow position:
               
chr2:68998534-68998365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
110, 18
               

               
Conread position:
               
293-468
               

               
Cow position:
               
chr2:46057787-46057967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
293-499
               

               
Cow position:
               
chr2:47879459-47879258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
30, 19
               

               
Conread position:
               
293-502
               

               
Cow position:
               
chr2:47019069-47018852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
18, 41
               

               
Conread position:
               
293-502
               

               
Cow position:
               
chr2:75227427-75227218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
56, 12
               

               
Conread position:
               
293-503
               

               
Cow position:
               
chr2:17841771-17841975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
56, 11
               

               
Conread position:
               
293-503
               

               
Cow position:
               
chr2:32431514-32431723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
17, 26
               

               
Conread position:
               
293-503
               

               
Cow position:
               
chr2:40257194-40257399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
56, 20
               

               
Conread position:
               
293-503
               

               
Cow position:
               
chr2:44007651-44007432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
56, 18
               

               
Conread position:
               
294-450
               

               
Cow position:
               
chr2:18615045-18615205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
55, 24
               

               
Conread position:
               
294-463
               

               
Cow position:
               
chr2:8083823-8083643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
294-463
               

               
Cow position:
               
chr2:72359406-72359588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
295-456
               

               
Cow position:
               
chr2:39187594-39187425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
30, 142
               

               
Conread position:
               
295-463
               

               
Cow position:
               
chr2:29801927-29802089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
54, 10
               

               
Conread position:
               
296-453
               

               
Cow position:
               
chr2:58969826-58969672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
26, 78
               

               
Conread position:
               
296-461
               

               
Cow position:
               
chr2:14848072-14847911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
27, 104
               

               
Conread position:
               
296-500
               

               
Cow position:
               
chr2:21003389-21003190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
81, 23
               

               
Conread position:
               
297-479
               

               
Cow position:
               
chr2:14634403-14634215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
52, 21
               

               
Conread position:
               
298-436
               

               
Cow position:
               
chr2:29806315-29806169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
298-458
               

               
Cow position:
               
chr2:47230608-47230446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
25, 53
               

               
Conread position:
               
298-462
               

               
Cow position:
               
chr2:2031788-2031963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
298-462
               

               
Cow position:
               
chr2:61975557-61975394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
51, 24
               

               
Conread position:
               
298-463
               

               
Cow position:
               
chr2:12139323-12139501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
298-463
               

               
Cow position:
               
chr2:37058951-37059122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
83, 20
               

               
Conread position:
               
298-463
               

               
Cow position:
               
chr2:39566475-39566647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
298-468
               

               
Cow position:
               
chr2:3773107-3773285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
51, 21
               

               
Conread position:
               
298-468
               

               
Cow position:
               
chr2:28873113-28872934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
298-495
               

               
Cow position:
               
chr2:85794749-85794948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
51, 153
               

               
Conread position:
               
298-499
               

               
Cow position:
               
chr2:29122106-29121900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
25, 168
               

               
Conread position:
               
298-501
               

               
Cow position:
               
chr2:60091216-60091418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
51, 124
               

               
Conread position:
               
298-502
               

               
Cow position:
               
chr2:41423006-41422809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
51, 16
               

               
Conread position:
               
298-503
               

               
Cow position:
               
chr2:7573303-7573491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
298-503
               

               
Cow position:
               
chr2:29394786-29394996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
51, 177
               

               
Conread position:
               
298-503
               

               
Cow position:
               
chr2:38658577-38658774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
69, 47
               

               
Conread position:
               
298-503
               

               
Cow position:
               
chr2:43990988-43990785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
48, 20
               

               
Conread position:
               
298-503
               

               
Cow position:
               
chr2:62743792-62743995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
45, 20
               

               
Conread position:
               
298-503
               

               
Cow position:
               
chr2:84480283-84480488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
52, 20
               

               
Conread position:
               
299-462
               

               
Cow position:
               
chr2:58153923-58153752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
299-468
               

               
Cow position:
               
chr2:4016644-4016806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
101, 6
               

               
Conread position:
               
299-468
               

               
Cow position:
               
chr2:9416584-9416752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
50, 89
               

               
Conread position:
               
299-499
               

               
Cow position:
               
chr2:12866145-12866356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
18, 176
               

               
Conread position:
               
299-499
               

               
Cow position:
               
chr2:49428604-49428388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
24, 150
               

               
Conread position:
               
299-502
               

               
Cow position:
               
chr2:41452451-41452247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
50, 20
               

               
Conread position:
               
299-503
               

               
Cow position:
               
chr2:69350355-69350552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
99, 20
               

               
Conread position:
               
300-434
               

               
Cow position:
               
chr2:10906425-10906298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
300-444
               

               
Cow position:
               
chr2:34810935-34811086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
300-462
               

               
Cow position:
               
chr2:22677417-22677240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
300-466
               

               
Cow position:
               
chr2:11599637-11599466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
49, 18
               

               
Conread position:
               
300-467
               

               
Cow position:
               
chr2:34591141-34591309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
49, 98
               

               
Conread position:
               
300-468
               

               
Cow position:
               
chr2:3554166-3554002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
17, 50
               

               
Conread position:
               
300-468
               

               
Cow position:
               
chr2:19320217-19320041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
91, 19
               

               
Conread position:
               
300-468
               

               
Cow position:
               
chr2:30954373-30954555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
300-476
               

               
Cow position:
               
chr2:60691099-60690916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
300-502
               

               
Cow position:
               
chr2:46164284-46164486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
46, 176
               

               
Conread position:
               
300-503
               

               
Cow position:
               
chr2:26361976-26361767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
49, 177
               

               
Conread position:
               
300-503
               

               
Cow position:
               
chr2:46162170-46161970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
48, 72
               

               
Conread position:
               
300-503
               

               
Cow position:
               
chr2:72315594-72315799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
49, 131
               

               
Conread position:
               
301-463
               

               
Cow position:
               
chr2:47165609-47165783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
21, 164
               

               
Conread position:
               
301-468
               

               
Cow position:
               
chr2:65988309-65988140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
84, 48
               

               
Conread position:
               
301-494
               

               
Cow position:
               
chr2:54052016-54052220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
301-499
               

               
Cow position:
               
chr2:33250870-33251072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
14, 163
               

               
Conread position:
               
301-503
               

               
Cow position:
               
chr2:42183579-42183385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
48, 18
               

               
Conread position:
               
302-463
               

               
Cow position:
               
chr2:27599285-27599452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
21, 52
               

               
Conread position:
               
302-463
               

               
Cow position:
               
chr2:52861420-52861584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
302-463
               

               
Cow position:
               
chr2:79687322-79687484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
22, 143
               

               
Conread position:
               
302-468
               

               
Cow position:
               
chr2:1476624-1476449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
302-500
               

               
Cow position:
               
chr2:44063566-44063760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
90, 12
               

               
Conread position:
               
302-501
               

               
Cow position:
               
chr2:75462538-75462343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
47, 76
               

               
Conread position:
               
302-502
               

               
Cow position:
               
chr2:50433072-50432872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
21, 169
               

               
Conread position:
               
302-503
               

               
Cow position:
               
chr2:21410446-21410232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
24, 176
               

               
Conread position:
               
303-450
               

               
Cow position:
               
chr2:48069160-48069299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
12, 67
               

               
Conread position:
               
303-463
               

               
Cow position:
               
chr2:36963736-36963569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
89, 50
               

               
Conread position:
               
303-468
               

               
Cow position:
               
chr2:22370734-22370904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
46, 16
               

               
Conread position:
               
303-468
               

               
Cow position:
               
chr2:55526557-55526732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
11, 130
               

               
Conread position:
               
303-470
               

               
Cow position:
               
chr2:73981842-73981672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
39, 15
               

               
Conread position:
               
303-483
               

               
Cow position:
               
chr2:16109535-16109714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
71, 15
               

               
Conread position:
               
303-485
               

               
Cow position:
               
chr2:5755087-5755272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
46, 91
               

               
Conread position:
               
303-498
               

               
Cow position:
               
chr2:81481060-81480858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
43, 197
               

               
Conread position:
               
304-468
               

               
Cow position:
               
chr2:32660395-32660219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
304-484
               

               
Cow position:
               
chr2:46129952-46130136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
304-491
               

               
Cow position:
               
chr2:78256505-78256315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
19, 174
               

               
Conread position:
               
305-455
               

               
Cow position:
               
chr2:617796-617951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
44, 14
               

               
Conread position:
               
305-456
               

               
Cow position:
               
chr2:55112816-55112964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
94, 18
               

               
Conread position:
               
305-458
               

               
Cow position:
               
chr2:23494013-23493852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
305-459
               

               
Cow position:
               
chr2:31410578-31410418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
15, 120
               

               
Conread position:
               
305-463
               

               
Cow position:
               
chr2:4096383-4096538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
43, 87
               

               
Conread position:
               
305-463
               

               
Cow position:
               
chr2:38886428-38886593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
305-463
               

               
Cow position:
               
chr2:59992035-59992205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
305-463
               

               
Cow position:
               
chr2:66959889-66959722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
44, 13
               

               
Conread position:
               
305-463
               

               
Cow position:
               
chr2:68328638-68328806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
305-468
               

               
Cow position:
               
chr2:36124647-36124475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
13, 148
               

               
Conread position:
               
305-468
               

               
Cow position:
               
chr2:54700668-54700498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
42, 13
               

               
Conread position:
               
305-468
               

               
Cow position:
               
chr2:64465566-64465734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
305-468
               

               
Cow position:
               
chr2:65830121-65830295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
305-477
               

               
Cow position:
               
chr2:82116299-82116123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
37, 116
               

               
Conread position:
               
305-478
               

               
Cow position:
               
chr2:21327421-21327245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
44, 14
               

               
Conread position:
               
305-493
               

               
Cow position:
               
chr2:39271231-39271407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
10, 105
               

               
Conread position:
               
305-495
               

               
Cow position:
               
chr2:63250200-63250385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
26, 49
               

               
Conread position:
               
305-500
               

               
Cow position:
               
chr2:70704462-70704274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
44, 21
               

               
Conread position:
               
305-502
               

               
Cow position:
               
chr2:56937890-56937694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
18, 41
               

               
Conread position:
               
305-503
               

               
Cow position:
               
chr2:6952681-6952481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
12, 67
               

               
Conread position:
               
305-503
               

               
Cow position:
               
chr2:7453148-7453336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
305-503
               

               
Cow position:
               
chr2:7533568-7533755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
43, 91
               

               
Conread position:
               
305-503
               

               
Cow position:
               
chr2:17114529-17114717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
47, 78
               

               
Conread position:
               
305-503
               

               
Cow position:
               
chr2:18997929-18997732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 169
               

               
Conread position:
               
305-503
               

               
Cow position:
               
chr2:34749776-34749971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
10, 95
               

               
Conread position:
               
305-503
               

               
Cow position:
               
chr2:39642959-39642763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
92, 14
               

               
Conread position:
               
305-503
               

               
Cow position:
               
chr2:41248778-41248584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
44, 106
               

               
Conread position:
               
305-503
               

               
Cow position:
               
chr2:58074133-58074331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
43, 150
               

               
Conread position:
               
305-503
               

               
Cow position:
               
chr2:65036082-65036268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
38, 14
               

               
Conread position:
               
305-503
               

               
Cow position:
               
chr2:69199111-69199307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
18, 115
               

               
Conread position:
               
306-434
               

               
Cow position:
               
chr2:46136960-46137091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
43, 90
               

               
Conread position:
               
306-455
               

               
Cow position:
               
chr2:69003257-69003103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
306-458
               

               
Cow position:
               
chr2:68190437-68190590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
87, 12
               

               
Conread position:
               
306-462
               

               
Cow position:
               
chr2:46222796-46222951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
12, 91
               

               
Conread position:
               
306-463
               

               
Cow position:
               
chr2:485785-485623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
36, 12
               

               
Conread position:
               
306-467
               

               
Cow position:
               
chr2:73094596-73094752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
43, 12
               

               
Conread position:
               
306-468
               

               
Cow position:
               
chr2:13369867-13369696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
43, 12
               

               
Conread position:
               
306-468
               

               
Cow position:
               
chr2:19211846-19212013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
12, 65
               

               
Conread position:
               
306-468
               

               
Cow position:
               
chr2:19328743-19328589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
43, 72
               

               
Conread position:
               
306-468
               

               
Cow position:
               
chr2:46312648-46312482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
17, 48
               

               
Conread position:
               
306-468
               

               
Cow position:
               
chr2:46342938-46343106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
306-468
               

               
Cow position:
               
chr2:67302230-67302060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
42, 146
               

               
Conread position:
               
306-485
               

               
Cow position:
               
chr2:46358039-46357849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
85, 43
               

               
Conread position:
               
306-494
               

               
Cow position:
               
chr2:28726671-28726485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
306-497
               

               
Cow position:
               
chr2:11435496-11435305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
43, 169
               

               
Conread position:
               
306-502
               

               
Cow position:
               
chr2:54968223-54968022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
9, 122
               

               
Conread position:
               
306-502
               

               
Cow position:
               
chr2:55004493-55004301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
42, 12
               

               
Conread position:
               
306-503
               

               
Cow position:
               
chr2:19137679-19137877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
41, 165
               

               
Conread position:
               
306-503
               

               
Cow position:
               
chr2:45478387-45478584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
8, 162
               

               
Conread position:
               
306-503
               

               
Cow position:
               
chr2:53491250-53491438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
109, 13
               

               
Conread position:
               
306-503
               

               
Cow position:
               
chr2:67595802-67596007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
10, 170
               

               
Conread position:
               
307-452
               

               
Cow position:
               
chr2:43577568-43577720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
307-468
               

               
Cow position:
               
chr2:63568920-63568752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
307-476
               

               
Cow position:
               
chr2:11657098-11656924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
42, 11
               

               
Conread position:
               
307-477
               

               
Cow position:
               
chr2:74070535-74070365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
87, 17
               

               
Conread position:
               
307-498
               

               
Cow position:
               
chr2:9936443-9936638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
16, 168
               

               
Conread position:
               
307-501
               

               
Cow position:
               
chr2:6160139-6160328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
42, 89
               

               
Conread position:
               
307-502
               

               
Cow position:
               
chr2:21171811-21171618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
41, 11
               

               
Conread position:
               
307-503
               

               
Cow position:
               
chr2:19058364-19058166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
15, 121
               

               
Conread position:
               
308-461
               

               
Cow position:
               
chr2:45565911-45565755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
41, 66
               

               
Conread position:
               
308-476
               

               
Cow position:
               
chr2:51277749-51277920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
16, 148
               

               
Conread position:
               
308-502
               

               
Cow position:
               
chr2:44198088-44197888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
41, 10
               

               
Conread position:
               
308-503
               

               
Cow position:
               
chr2:20947578-20947385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
41, 165
               

               
Conread position:
               
309-463
               

               
Cow position:
               
chr2:51023995-51024153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
11, 33
               

               
Conread position:
               
309-468
               

               
Cow position:
               
chr2:44065773-44065615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
40, 89
               

               
Conread position:
               
310-468
               

               
Cow position:
               
chr2:12873615-12873453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
39, 94
               

               
Conread position:
               
310-490
               

               
Cow position:
               
chr2:10842545-10842724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
93, 42
               

               
Conread position:
               
311-463
               

               
Cow position:
               
chr2:69092948-69093102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
311-468
               

               
Cow position:
               
chr2:45619195-45619354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
78, 33
               

               
Conread position:
               
311-468
               

               
Cow position:
               
chr2:46015767-46015929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
311-468
               

               
Cow position:
               
chr2:46967992-46968150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
80, 12
               

               
Conread position:
               
311-494
               

               
Cow position:
               
chr2:54883674-54883491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
106, 42
               

               
Conread position:
               
311-497
               

               
Cow position:
               
chr2:45574802-45574985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
38, 131
               

               
Conread position:
               
311-500
               

               
Cow position:
               
chr2:4207362-4207552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
35, 152
               

               
Conread position:
               
311-501
               

               
Cow position:
               
chr2:17966835-17967014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
92, 42
               

               
Conread position:
               
311-501
               

               
Cow position:
               
chr2:77378669-77378488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
12, 47
               

               
Conread position:
               
311-502
               

               
Cow position:
               
chr2:972024-971838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
88, 18
               

               
Conread position:
               
311-502
               

               
Cow position:
               
chr2:24530568-24530382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
38, 7
               

               
Conread position:
               
311-502
               

               
Cow position:
               
chr2:38162593-38162785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
24, 100
               

               
Conread position:
               
311-503
               

               
Cow position:
               
chr2:5604727-5604538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
83, 141
               

               
Conread position:
               
311-503
               

               
Cow position:
               
chr2:31784135-31783943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
38, 153
               

               
Conread position:
               
311-503
               

               
Cow position:
               
chr2:59592562-59592753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
38, 7
               

               
Conread position:
               
312-467
               

               
Cow position:
               
chr2:45597186-45597023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
312-468
               

               
Cow position:
               
chr2:50449704-50449868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
312-483
               

               
Cow position:
               
chr2:11631727-11631551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
87, 11
               

               
Conread position:
               
312-503
               

               
Cow position:
               
chr2:38965815-38965633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
75, 87
               

               
Conread position:
               
313-446
               

               
Cow position:
               
chr2:17453437-17453304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
75, 15
               

               
Conread position:
               
313-449
               

               
Cow position:
               
chr2:32115267-32115131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
38, 129
               

               
Conread position:
               
313-449
               

               
Cow position:
               
chr2:32887741-32887884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
71, 9
               

               
Conread position:
               
313-461
               

               
Cow position:
               
chr2:24594066-24593916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
34, 83
               

               
Conread position:
               
313-468
               

               
Cow position:
               
chr2:16686744-16686587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
9, 69
               

               
Conread position:
               
313-485
               

               
Cow position:
               
chr2:21382645-21382828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
36, 6
               

               
Conread position:
               
313-503
               

               
Cow position:
               
chr2:40703466-40703653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
74, 109
               

               
Conread position:
               
313-503
               

               
Cow position:
               
chr2:46053678-46053483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
36, 163
               

               
Conread position:
               
314-463
               

               
Cow position:
               
chr2:73544701-73544851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
33, 93
               

               
Conread position:
               
314-466
               

               
Cow position:
               
chr2:16412411-16412568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
314-468
               

               
Cow position:
               
chr2:1073725-1073561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
32, 88
               

               
Conread position:
               
314-468
               

               
Cow position:
               
chr2:65603434-65603594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
8, 108
               

               
Conread position:
               
314-468
               

               
Cow position:
               
chr2:70824033-70824190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
35, 82
               

               
Conread position:
               
314-468
               

               
Cow position:
               
chr2:77211982-77212140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
314-469
               

               
Cow position:
               
chr2:70908129-70908287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
314-479
               

               
Cow position:
               
chr2:46120441-46120612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
314-491
               

               
Cow position:
               
chr2:82580732-82580903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
35, 82
               

               
Conread position:
               
314-496
               

               
Cow position:
               
chr2:2673734-2673551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
35, 147
               

               
Conread position:
               
314-499
               

               
Cow position:
               
chr2:16889853-16890046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
314-500
               

               
Cow position:
               
chr2:992356-992171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
35, 66
               

               
Conread position:
               
314-501
               

               
Cow position:
               
chr2:13002000-13001814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
38, 69
               

               
Conread position:
               
314-503
               

               
Cow position:
               
chr2:827416-827598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
314-503
               

               
Cow position:
               
chr2:994168-994352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
37, 57
               

               
Conread position:
               
314-503
               

               
Cow position:
               
chr2:9063471-9063287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
35, 99
               

               
Conread position:
               
314-503
               

               
Cow position:
               
chr2:13684894-13684712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
35, 82
               

               
Conread position:
               
314-503
               

               
Cow position:
               
chr2:26500735-26500920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
33, 87
               

               
Conread position:
               
314-503
               

               
Cow position:
               
chr2:37009610-37009423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
34, 159
               

               
Conread position:
               
314-503
               

               
Cow position:
               
chr2:37619706-37619901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
36, 167
               

               
Conread position:
               
314-503
               

               
Cow position:
               
chr2:41087902-41088086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
35, 84
               

               
Conread position:
               
314-503
               

               
Cow position:
               
chr2:45498999-45499189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
35, 158
               

               
Conread position:
               
314-503
               

               
Cow position:
               
chr2:46227669-46227472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
35, 53
               

               
Conread position:
               
314-503
               

               
Cow position:
               
chr2:57733631-57733447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
33, 87
               

               
Conread position:
               
315-457
               

               
Cow position:
               
chr2:77140378-77140527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
315-463
               

               
Cow position:
               
chr2:84750910-84750756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
34, 128
               

               
Conread position:
               
315-500
               

               
Cow position:
               
chr2:54654410-54654599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
10, 164
               

               
Conread position:
               
316-468
               

               
Cow position:
               
chr2:1888474-1888626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
33, 73
               

               
Conread position:
               
317-462
               

               
Cow position:
               
chr2:14313619-14313463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
317-467
               

               
Cow position:
               
chr2:46378591-46378750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
317-468
               

               
Cow position:
               
chr2:19164768-19164925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
317-499
               

               
Cow position:
               
chr2:81294030-81293840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
71, 163
               

               
Conread position:
               
318-502
               

               
Cow position:
               
chr2:39334674-39334857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
31, 151
               

               
Conread position:
               
319-461
               

               
Cow position:
               
chr2:15872128-15871984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
319-463
               

               
Cow position:
               
chr2:32488471-32488619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
31, 70
               

               
Conread position:
               
319-463
               

               
Cow position:
               
chr2:43139456-43139610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
319-468
               

               
Cow position:
               
chr2:30384066-30384226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
319-468
               

               
Cow position:
               
chr2:39068478-39068327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
83, 34
               

               
Conread position:
               
319-468
               

               
Cow position:
               
chr2:64562738-64562897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
319-468
               

               
Cow position:
               
chr2:78379222-78379377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
319-483
               

               
Cow position:
               
chr2:18621611-18621441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
30, 59
               

               
Conread position:
               
319-483
               

               
Cow position:
               
chr2:64306967-64306801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
33, 77
               

               
Conread position:
               
319-494
               

               
Cow position:
               
chr2:54931642-54931817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
74, 34
               

               
Conread position:
               
319-499
               

               
Cow position:
               
chr2:46317072-46316877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
319-499
               

               
Cow position:
               
chr2:64323436-64323257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
24, 82
               

               
Conread position:
               
319-503
               

               
Cow position:
               
chr2:19494413-19494227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
29, 158
               

               
Conread position:
               
319-503
               

               
Cow position:
               
chr2:38362181-38362352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
319-503
               

               
Cow position:
               
chr2:46351584-46351769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
30, 157
               

               
Conread position:
               
319-503
               

               
Cow position:
               
chr2:53500847-53501022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
28, 70
               

               
Conread position:
               
319-503
               

               
Cow position:
               
chr2:80177399-80177574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
30, 79
               

               
Conread position:
               
320-468
               

               
Cow position:
               
chr2:44168261-44168107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
320-468
               

               
Cow position:
               
chr2:77941475-77941627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
32, 131
               

               
Conread position:
               
320-502
               

               
Cow position:
               
chr2:45138245-45138421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
23, 76
               

               
Conread position:
               
320-503
               

               
Cow position:
               
chr2:38640516-38640336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
30, 152
               

               
Conread position:
               
320-503
               

               
Cow position:
               
chr2:41462227-41462411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
29, 148
               

               
Conread position:
               
321-466
               

               
Cow position:
               
chr2:78249936-78249780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
321-497
               

               
Cow position:
               
chr2:81493406-81493580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
76, 108
               

               
Conread position:
               
322-442
               

               
Cow position:
               
chr2:55660919-55660794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
322-449
               

               
Cow position:
               
chr2:46245266-46245400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
322-449
               

               
Cow position:
               
chr2:68239397-68239264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
322-479
               

               
Cow position:
               
chr2:85460118-85459956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
322-497
               

               
Cow position:
               
chr2:42801231-42801057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
27, 148
               

               
Conread position:
               
322-497
               

               
Cow position:
               
chr2:43624344-43624517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
27, 76
               

               
Conread position:
               
322-499
               

               
Cow position:
               
chr2:78669727-78669908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
75, 151
               

               
Conread position:
               
322-501
               

               
Cow position:
               
chr2:45642297-45642470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
67, 27
               

               
Conread position:
               
322-501
               

               
Cow position:
               
chr2:85392047-85392227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
21, 50
               

               
Conread position:
               
322-503
               

               
Cow position:
               
chr2:13695042-13695228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
25, 151
               

               
Conread position:
               
322-503
               

               
Cow position:
               
chr2:15298730-15298552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
27, 145
               

               
Conread position:
               
322-503
               

               
Cow position:
               
chr2:28330555-28330734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
24, 113
               

               
Conread position:
               
322-503
               

               
Cow position:
               
chr2:30351508-30351693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
25, 153
               

               
Conread position:
               
323-485
               

               
Cow position:
               
chr2:1422547-1422373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
324-503
               

               
Cow position:
               
chr2:46202461-46202275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
23, 105
               

               
Conread position:
               
324-503
               

               
Cow position:
               
chr2:51099780-51099962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
29, 154
               

               
Conread position:
               
325-461
               

               
Cow position:
               
chr2:70847070-70847213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
326-503
               

               
Cow position:
               
chr2:44170749-44170572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
23, 97
               

               
Conread position:
               
329-503
               

               
Cow position:
               
chr2:17492330-17492505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
19, 147
               

               
Conread position:
               
329-503
               

               
Cow position:
               
chr2:45542213-45542386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
20, 145
               

               
Conread position:
               
329-503
               

               
Cow position:
               
chr2:77467270-77467435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
20, 47
               

               
Conread position:
               
330-503
               

               
Cow position:
               
chr2:39750304-39750128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
19, 135
               

               
Conread position:
               
330-503
               

               
Cow position:
               
chr2:59819624-59819794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
18, 50
               

               
Conread position:
               
331-497
               

               
Cow position:
               
chr2:1141663-1141502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
18, 65
               

               
Conread position:
               
331-503
               

               
Cow position:
               
chr2:10440015-10439852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
331-503
               

               
Cow position:
               
chr2:45535649-45535479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
61, 142
               

               
Conread position:
               
334-503
               

               
Cow position:
               
chr2:23120588-23120760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
15, 144
               

               
Conread position:
               
334-503
               

               
Cow position:
               
chr2:56338852-56339018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
58, 138
               

               
Conread position:
               
334-503
               

               
Cow position:
               
chr2:63074680-63074839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
15, 55
               

               
Conread position:
               
341-501
               

               
Cow position:
               
chr2:35948507-35948664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
46, 132
               

               
Conread position:
               
345-476
               

               
Cow position:
               
chr2:48199265-48199400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
345-495
               

               
Cow position:
               
chr2:13328837-13328983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
58, 128
               

               
Conread position:
               
345-503
               

               
Cow position:
               
chr2:13582754-13582597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
22, 121
               

               
Conread position:
               
347-502
               

               
Cow position:
               
chr2:86061971-86061812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
50, 125
               

               
Conread position:
               
349-503
               

               
Cow position:
               
chr2:39513638-39513480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
43, 15
               

               
Conread position:
               
349-503
               

               
Cow position:
               
chr2:43790266-43790113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
47, 125
               

               
Conread position:
               
350-498
               

               
Cow position:
               
chr2:35208074-35207933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
351-468
               

               
Cow position:
               
chr2:1762955-1762834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
351-502
               

               
Cow position:
               
chr2:54971340-54971193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
49, 115
               

               
Conread position:
               
362-502
               

               
Cow position:
               
chr2:46143279-46143143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
34, 16
               

               
Conread position:
               
365-482
               

               
Cow position:
               
chr2:29860151-29860030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
371-503
               

               
Cow position:
               
chr2:39584589-39584462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
43, 99
               

               
Conread position:
               
375-503
               

               
Cow position:
               
chr2:83184289-83184167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
381-503
               

               
Cow position:
               
chr2:52398445-52398329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
84, 0
               
Show alignments to all cow chromosomes.