Cow genome map
| Conread name: | rtra25_l14r1.y1 |
| Conread position: | 235-499 |
| Cow position: | chr20:29990126-29990388 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 12, 44 |
| Conread position: | 250-458 |
| Cow position: | chr20:35605512-35605301 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 16, 24 |
| Conread position: | 267-462 |
| Cow position: | chr20:18500821-18500617 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 41, 16 |
| Conread position: | 267-503 |
| Cow position: | chr20:18379673-18379434 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 180 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 14, 189 |
| Conread position: | 275-503 |
| Cow position: | chr20:10245771-10245998 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 7, 61 |
| Conread position: | 277-468 |
| Cow position: | chr20:14283210-14283004 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 38, 11 |
| Conread position: | 279-468 |
| Cow position: | chr20:297723-297924 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 43, 5 |
| Conread position: | 282-463 |
| Cow position: | chr20:21018699-21018513 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 67, 37 |
| Conread position: | 284-458 |
| Cow position: | chr20:38700851-38701029 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 22, 37 |
| Conread position: | 284-479 |
| Cow position: | chr20:1824355-1824556 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 14, 28 |
| Conread position: | 285-419 |
| Cow position: | chr20:24522618-24522480 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 61, 8 |
| Conread position: | 285-463 |
| Cow position: | chr20:11661052-11661234 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 18, 34 |
| Conread position: | 285-501 |
| Cow position: | chr20:8555998-8556212 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 68, 11 |
| Conread position: | 285-503 |
| Cow position: | chr20:5950370-5950588 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 61, 19 |
| Conread position: | 285-503 |
| Cow position: | chr20:24070075-24069861 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 102, 8 |
| Conread position: | 286-463 |
| Cow position: | chr20:15496694-15496861 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 286-500 |
| Cow position: | chr20:24491750-24491969 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 33, 196 |
| Conread position: | 286-503 |
| Cow position: | chr20:6474009-6473788 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 17, 34 |
| Conread position: | 286-503 |
| Cow position: | chr20:32847614-32847400 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 46, 19 |
| Conread position: | 287-483 |
| Cow position: | chr20:8245992-8245788 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 23, 165 |
| Conread position: | 289-482 |
| Cow position: | chr20:17841014-17840815 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 7, 50 |
| Conread position: | 289-500 |
| Cow position: | chr20:11359366-11359574 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 34, 72 |
| Conread position: | 290-468 |
| Cow position: | chr20:11548458-11548640 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 290-501 |
| Cow position: | chr20:8578523-8578306 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 53, 29 |
| Conread position: | 290-501 |
| Cow position: | chr20:34467692-34467900 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 107, 21 |
| Conread position: | 290-502 |
| Cow position: | chr20:29845326-29845107 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 33, 140 |
| Conread position: | 290-503 |
| Cow position: | chr20:25009364-25009577 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 57, 27 |
| Conread position: | 292-463 |
| Cow position: | chr20:11822748-11822567 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 30, 50 |
| Conread position: | 292-463 |
| Cow position: | chr20:12205474-12205645 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 15, 62 |
| Conread position: | 292-503 |
| Cow position: | chr20:8547328-8547123 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 10, 28 |
| Conread position: | 293-462 |
| Cow position: | chr20:32636066-32636240 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 29, 10 |
| Conread position: | 293-483 |
| Cow position: | chr20:27315244-27315049 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 29, 184 |
| Conread position: | 293-489 |
| Cow position: | chr20:34097679-34097892 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 293-503 |
| Cow position: | chr20:2316160-2316370 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 55, 184 |
| Conread position: | 294-503 |
| Cow position: | chr20:4755565-4755779 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 9, 181 |
| Conread position: | 294-503 |
| Cow position: | chr20:7756373-7756567 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 109, 24 |
| Conread position: | 296-468 |
| Cow position: | chr20:381869-382048 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 26, 46 |
| Conread position: | 296-499 |
| Cow position: | chr20:20158395-20158195 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 50, 176 |
| Conread position: | 296-503 |
| Cow position: | chr20:11135486-11135706 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 298-463 |
| Cow position: | chr20:14490501-14490335 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 51, 20 |
| Conread position: | 298-463 |
| Cow position: | chr20:21279643-21279475 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 298-502 |
| Cow position: | chr20:14807145-14806943 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 51, 109 |
| Conread position: | 298-502 |
| Cow position: | chr20:19237330-19237131 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 52, 19 |
| Conread position: | 298-503 |
| Cow position: | chr20:4891856-4892064 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 51, 180 |
| Conread position: | 298-503 |
| Cow position: | chr20:26040835-26041043 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 51, 180 |
| Conread position: | 298-503 |
| Cow position: | chr20:37273258-37273053 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 20, 172 |
| Conread position: | 299-463 |
| Cow position: | chr20:21941688-21941523 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 299-466 |
| Cow position: | chr20:13829522-13829346 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 299-502 |
| Cow position: | chr20:22235560-22235363 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 50, 90 |
| Conread position: | 299-502 |
| Cow position: | chr20:37919117-37919314 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 118, 20 |
| Conread position: | 300-466 |
| Cow position: | chr20:3564410-3564243 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 48, 18 |
| Conread position: | 300-468 |
| Cow position: | chr20:14433158-14433337 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 300-503 |
| Cow position: | chr20:7425933-7426142 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 36, 177 |
| Conread position: | 301-451 |
| Cow position: | chr20:11368105-11368261 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 301-455 |
| Cow position: | chr20:21169508-21169665 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 7, 97 |
| Conread position: | 302-463 |
| Cow position: | chr20:23428293-23428453 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 21, 52 |
| Conread position: | 303-441 |
| Cow position: | chr20:1220310-1220444 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 46, 10 |
| Conread position: | 303-467 |
| Cow position: | chr20:4789606-4789766 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 12, 49 |
| Conread position: | 304-490 |
| Cow position: | chr20:20720810-20720990 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 10, 46 |
| Conread position: | 304-503 |
| Cow position: | chr20:20984253-20984047 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 45, 174 |
| Conread position: | 305-458 |
| Cow position: | chr20:4944997-4945160 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 44, 13 |
| Conread position: | 305-459 |
| Cow position: | chr20:25351171-25351320 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 44, 94 |
| Conread position: | 305-460 |
| Cow position: | chr20:36741718-36741555 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 305-461 |
| Cow position: | chr20:13512912-13512750 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 23, 49 |
| Conread position: | 305-463 |
| Cow position: | chr20:14755588-14755751 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 305-463 |
| Cow position: | chr20:31845035-31845196 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 41, 13 |
| Conread position: | 305-467 |
| Cow position: | chr20:26387711-26387546 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 82, 48 |
| Conread position: | 305-468 |
| Cow position: | chr20:23358239-23358410 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 44, 160 |
| Conread position: | 305-469 |
| Cow position: | chr20:38430760-38430937 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 305-478 |
| Cow position: | chr20:28982954-28982775 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 24, 164 |
| Conread position: | 305-498 |
| Cow position: | chr20:10209060-10208869 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 29, 13 |
| Conread position: | 305-503 |
| Cow position: | chr20:2298546-2298731 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 305-503 |
| Cow position: | chr20:23846411-23846610 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 44, 12 |
| Conread position: | 305-503 |
| Cow position: | chr20:26996790-26996585 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 9, 139 |
| Conread position: | 306-452 |
| Cow position: | chr20:4931334-4931181 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 11, 137 |
| Conread position: | 306-463 |
| Cow position: | chr20:21344725-21344556 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 306-472 |
| Cow position: | chr20:41313635-41313467 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 17, 128 |
| Conread position: | 306-499 |
| Cow position: | chr20:23540916-23541110 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 17, 82 |
| Conread position: | 306-499 |
| Cow position: | chr20:38090172-38089972 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 13, 176 |
| Conread position: | 306-503 |
| Cow position: | chr20:1640215-1640398 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 43, 12 |
| Conread position: | 306-503 |
| Cow position: | chr20:5702976-5702779 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 43, 169 |
| Conread position: | 306-503 |
| Cow position: | chr20:15530114-15529916 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 76, 164 |
| Conread position: | 306-503 |
| Cow position: | chr20:19834581-19834775 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 22, 26 |
| Conread position: | 306-503 |
| Cow position: | chr20:20590050-20590246 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 21, 27 |
| Conread position: | 306-503 |
| Cow position: | chr20:35444851-35445048 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 13, 165 |
| Conread position: | 307-468 |
| Cow position: | chr20:20967565-20967405 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 50, 11 |
| Conread position: | 307-471 |
| Cow position: | chr20:37358110-37357937 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 42, 11 |
| Conread position: | 307-499 |
| Cow position: | chr20:7441891-7442085 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 77, 11 |
| Conread position: | 307-499 |
| Cow position: | chr20:35201578-35201757 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 42, 97 |
| Conread position: | 307-500 |
| Cow position: | chr20:33623306-33623494 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 39, 90 |
| Conread position: | 307-503 |
| Cow position: | chr20:398059-398251 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 40, 104 |
| Conread position: | 307-503 |
| Cow position: | chr20:8442202-8442409 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 307-503 |
| Cow position: | chr20:19635925-19636121 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 42, 163 |
| Conread position: | 308-468 |
| Cow position: | chr20:17251974-17251801 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 308-485 |
| Cow position: | chr20:3599150-3599333 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 308-494 |
| Cow position: | chr20:21372548-21372372 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 40, 46 |
| Conread position: | 308-501 |
| Cow position: | chr20:12239438-12239623 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 95, 23 |
| Conread position: | 309-484 |
| Cow position: | chr20:22012641-22012470 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 14, 97 |
| Conread position: | 309-499 |
| Cow position: | chr20:24097249-24097060 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 14, 66 |
| Conread position: | 311-427 |
| Cow position: | chr20:3502749-3502632 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 38, 87 |
| Conread position: | 311-490 |
| Cow position: | chr20:14572127-14572302 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 13, 86 |
| Conread position: | 311-503 |
| Cow position: | chr20:7624010-7624193 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 35, 95 |
| Conread position: | 311-503 |
| Cow position: | chr20:15548643-15548841 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 88, 161 |
| Conread position: | 312-464 |
| Cow position: | chr20:21210277-21210121 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 313-467 |
| Cow position: | chr20:16977590-16977759 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 313-500 |
| Cow position: | chr20:7438611-7438793 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 36, 9 |
| Conread position: | 313-503 |
| Cow position: | chr20:3255280-3255091 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 36, 6 |
| Conread position: | 313-503 |
| Cow position: | chr20:12420372-12420563 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 34, 143 |
| Conread position: | 313-503 |
| Cow position: | chr20:32865957-32866131 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 81, 13 |
| Conread position: | 313-503 |
| Cow position: | chr20:35442033-35442227 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 12, 166 |
| Conread position: | 314-445 |
| Cow position: | chr20:17515395-17515527 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 314-459 |
| Cow position: | chr20:38061527-38061673 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 35, 84 |
| Conread position: | 314-463 |
| Cow position: | chr20:19746218-19746060 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 314-463 |
| Cow position: | chr20:23506182-23506024 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 35, 14 |
| Conread position: | 314-468 |
| Cow position: | chr20:19919572-19919732 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 314-485 |
| Cow position: | chr20:30710397-30710566 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 68, 35 |
| Conread position: | 314-496 |
| Cow position: | chr20:40177490-40177307 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 31, 156 |
| Conread position: | 314-499 |
| Cow position: | chr20:14620065-14620244 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 127, 17 |
| Conread position: | 314-503 |
| Cow position: | chr20:4206200-4206027 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 84, 21 |
| Conread position: | 314-503 |
| Cow position: | chr20:13805562-13805371 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 34, 81 |
| Conread position: | 314-503 |
| Cow position: | chr20:14759427-14759610 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 11, 82 |
| Conread position: | 314-503 |
| Cow position: | chr20:14980261-14980454 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 35, 107 |
| Conread position: | 314-503 |
| Cow position: | chr20:21325571-21325381 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 33, 158 |
| Conread position: | 314-503 |
| Cow position: | chr20:27407649-27407832 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 37, 126 |
| Conread position: | 319-458 |
| Cow position: | chr20:40578432-40578572 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 5, 116 |
| Conread position: | 319-463 |
| Cow position: | chr20:38934825-38934966 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 30, 67 |
| Conread position: | 319-466 |
| Cow position: | chr20:10956545-10956400 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 319-481 |
| Cow position: | chr20:34881162-34881326 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 69, 26 |
| Conread position: | 319-493 |
| Cow position: | chr20:22065302-22065131 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 28, 153 |
| Conread position: | 319-502 |
| Cow position: | chr20:33434918-33435108 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 30, 56 |
| Conread position: | 319-503 |
| Cow position: | chr20:7737993-7738176 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 30, 155 |
| Conread position: | 319-503 |
| Cow position: | chr20:19201775-19201586 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 30, 157 |
| Conread position: | 319-503 |
| Cow position: | chr20:21428399-21428217 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 30, 114 |
| Conread position: | 320-500 |
| Cow position: | chr20:11751894-11751712 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 28, 126 |
| Conread position: | 320-503 |
| Cow position: | chr20:36312271-36312453 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 28, 56 |
| Conread position: | 321-497 |
| Cow position: | chr20:5365167-5364979 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 322-458 |
| Cow position: | chr20:28605444-28605303 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 322-499 |
| Cow position: | chr20:4334300-4334471 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 25, 72 |
| Conread position: | 322-503 |
| Cow position: | chr20:3148919-3148739 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 27, 44 |
| Conread position: | 322-503 |
| Cow position: | chr20:6603267-6603096 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 26, 14 |
| Conread position: | 322-503 |
| Cow position: | chr20:12581718-12581899 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 155 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 27, 153 |
| Conread position: | 323-497 |
| Cow position: | chr20:11499240-11499061 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 323-503 |
| Cow position: | chr20:14880023-14879844 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 26, 144 |
| Conread position: | 324-458 |
| Cow position: | chr20:18423912-18423774 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 324-503 |
| Cow position: | chr20:25161895-25162070 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 25, 43 |
| Conread position: | 325-503 |
| Cow position: | chr20:39268847-39269030 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 21, 151 |
| Conread position: | 329-467 |
| Cow position: | chr20:13752444-13752310 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 20, 65 |
| Conread position: | 330-501 |
| Cow position: | chr20:23633391-23633562 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 51, 29 |
| Conread position: | 334-461 |
| Cow position: | chr20:12033400-12033531 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 339-463 |
| Cow position: | chr20:32555501-32555379 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 341-503 |
| Cow position: | chr20:31746420-31746581 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 48, 127 |
| Conread position: | 343-503 |
| Cow position: | chr20:20203429-20203273 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 14, 128 |
| Conread position: | 345-468 |
| Cow position: | chr20:18831668-18831794 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 345-499 |
| Cow position: | chr20:354686-354850 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 345-503 |
| Cow position: | chr20:15766324-15766165 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 43, 130 |
| Conread position: | 345-503 |
| Cow position: | chr20:26905874-26905730 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 347-466 |
| Cow position: | chr20:19955563-19955679 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 348-492 |
| Cow position: | chr20:32463317-32463458 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 40, 8 |
| Conread position: | 351-501 |
| Cow position: | chr20:630730-630579 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 42, 123 |
| Conread position: | 355-468 |
| Cow position: | chr20:19060638-19060755 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 367-503 |
| Cow position: | chr20:21815748-21815616 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 32, 103 |
| Conread position: | 389-503 |
| Cow position: | chr20:8912334-8912443 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 14, 81 |
Show alignments to all cow chromosomes.