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Cow genome map

           
Conread name:
           
rtra25_l14r1.y1
        

               
Conread position:
               
232-463
               

               
Cow position:
               
chr21:34581357-34581581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
13, 42
               

               
Conread position:
               
243-503
               

               
Cow position:
               
chr21:20174657-20174394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
26, 45
               

               
Conread position:
               
247-503
               

               
Cow position:
               
chr21:10004551-10004809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
79, 30
               

               
Conread position:
               
266-453
               

               
Cow position:
               
chr21:12354391-12354583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
58, 7
               

               
Conread position:
               
267-503
               

               
Cow position:
               
chr21:15012742-15012515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
132, 31
               

               
Conread position:
               
269-468
               

               
Cow position:
               
chr21:42455168-42454965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
7, 25
               

               
Conread position:
               
270-485
               

               
Cow position:
               
chr21:37495628-37495852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
13, 209
               

               
Conread position:
               
270-503
               

               
Cow position:
               
chr21:19359874-19360100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
52, 33
               

               
Conread position:
               
275-456
               

               
Cow position:
               
chr21:30359047-30359228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
73, 13
               

               
Conread position:
               
276-463
               

               
Cow position:
               
chr21:48482231-48482420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
71, 9
               

               
Conread position:
               
276-468
               

               
Cow position:
               
chr21:938330-938124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
21, 155
               

               
Conread position:
               
277-468
               

               
Cow position:
               
chr21:9710450-9710626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
71, 26
               

               
Conread position:
               
278-468
               

               
Cow position:
               
chr21:24757237-24757045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
70, 41
               

               
Conread position:
               
281-500
               

               
Cow position:
               
chr21:45906323-45906544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
7, 25
               

               
Conread position:
               
282-483
               

               
Cow position:
               
chr21:3135576-3135781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
67, 11
               

               
Conread position:
               
283-499
               

               
Cow position:
               
chr21:20160978-20160756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
9, 198
               

               
Conread position:
               
284-503
               

               
Cow position:
               
chr21:5465045-5464824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
21, 193
               

               
Conread position:
               
285-441
               

               
Cow position:
               
chr21:40821597-40821763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
285-452
               

               
Cow position:
               
chr21:42341648-42341817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
64, 13
               

               
Conread position:
               
285-483
               

               
Cow position:
               
chr21:27409436-27409644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
22, 151
               

               
Conread position:
               
285-493
               

               
Cow position:
               
chr21:8430797-8431014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
35, 199
               

               
Conread position:
               
285-503
               

               
Cow position:
               
chr21:3430841-3430628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
25, 61
               

               
Conread position:
               
285-503
               

               
Cow position:
               
chr21:4281584-4281799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
30, 149
               

               
Conread position:
               
285-503
               

               
Cow position:
               
chr21:8986325-8986098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
30, 200
               

               
Conread position:
               
285-503
               

               
Cow position:
               
chr21:43693113-43692892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
38, 20
               

               
Conread position:
               
286-463
               

               
Cow position:
               
chr21:7424719-7424904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
286-463
               

               
Cow position:
               
chr21:18450051-18449862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
286-503
               

               
Cow position:
               
chr21:33413800-33414012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
10, 105
               

               
Conread position:
               
287-455
               

               
Cow position:
               
chr21:12339912-12339741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
287-468
               

               
Cow position:
               
chr21:31462853-31462667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
287-468
               

               
Cow position:
               
chr21:44732751-44732939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
65, 31
               

               
Conread position:
               
287-483
               

               
Cow position:
               
chr21:21940117-21940319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
38, 6
               

               
Conread position:
               
288-436
               

               
Cow position:
               
chr21:35337636-35337786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
58, 23
               

               
Conread position:
               
289-452
               

               
Cow position:
               
chr21:30368368-30368197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
289-460
               

               
Cow position:
               
chr21:28604377-28604204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
22, 63
               

               
Conread position:
               
289-465
               

               
Cow position:
               
chr21:1464637-1464451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
289-503
               

               
Cow position:
               
chr21:34654362-34654149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
60, 186
               

               
Conread position:
               
290-503
               

               
Cow position:
               
chr21:236177-235981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
291-503
               

               
Cow position:
               
chr21:47719015-47719223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
51, 157
               

               
Conread position:
               
293-462
               

               
Cow position:
               
chr21:5789645-5789473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
55, 26
               

               
Conread position:
               
293-463
               

               
Cow position:
               
chr21:31253819-31253643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
21, 50
               

               
Conread position:
               
293-465
               

               
Cow position:
               
chr21:4674748-4674577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
98, 25
               

               
Conread position:
               
293-468
               

               
Cow position:
               
chr21:742561-742382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
53, 5
               

               
Conread position:
               
293-503
               

               
Cow position:
               
chr21:29658559-29658352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
56, 25
               

               
Conread position:
               
294-461
               

               
Cow position:
               
chr21:29011690-29011861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
55, 17
               

               
Conread position:
               
294-502
               

               
Cow position:
               
chr21:44724089-44724291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
55, 150
               

               
Conread position:
               
295-468
               

               
Cow position:
               
chr21:48334501-48334687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
54, 26
               

               
Conread position:
               
295-485
               

               
Cow position:
               
chr21:47713724-47713921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
54, 23
               

               
Conread position:
               
296-465
               

               
Cow position:
               
chr21:36756891-36756722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
98, 15
               

               
Conread position:
               
297-463
               

               
Cow position:
               
chr21:38901045-38900884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
50, 24
               

               
Conread position:
               
297-503
               

               
Cow position:
               
chr21:5218990-5218778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
52, 16
               

               
Conread position:
               
298-421
               

               
Cow position:
               
chr21:10171473-10171593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
298-458
               

               
Cow position:
               
chr21:2787518-2787681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
16, 52
               

               
Conread position:
               
298-468
               

               
Cow position:
               
chr21:27521062-27521234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
44, 22
               

               
Conread position:
               
298-479
               

               
Cow position:
               
chr21:23673028-23672838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
45, 65
               

               
Conread position:
               
298-502
               

               
Cow position:
               
chr21:38918482-38918267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
50, 20
               

               
Conread position:
               
298-503
               

               
Cow position:
               
chr21:16570168-16569977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
99, 17
               

               
Conread position:
               
298-503
               

               
Cow position:
               
chr21:36682608-36682401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
51, 16
               

               
Conread position:
               
299-460
               

               
Cow position:
               
chr21:15543956-15544116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
19, 96
               

               
Conread position:
               
299-461
               

               
Cow position:
               
chr21:27677764-27677592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
50, 20
               

               
Conread position:
               
299-468
               

               
Cow position:
               
chr21:33982535-33982705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
50, 13
               

               
Conread position:
               
299-502
               

               
Cow position:
               
chr21:82339-82144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
50, 19
               

               
Conread position:
               
300-452
               

               
Cow position:
               
chr21:11761844-11761684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
300-463
               

               
Cow position:
               
chr21:36695810-36695980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
82, 23
               

               
Conread position:
               
300-466
               

               
Cow position:
               
chr21:44861240-44861396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
300-499
               

               
Cow position:
               
chr21:6713243-6713443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
47, 170
               

               
Conread position:
               
301-452
               

               
Cow position:
               
chr21:30976988-30977142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
20, 16
               

               
Conread position:
               
301-462
               

               
Cow position:
               
chr21:28882460-28882292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
48, 17
               

               
Conread position:
               
301-468
               

               
Cow position:
               
chr21:745448-745280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
48, 17
               

               
Conread position:
               
301-499
               

               
Cow position:
               
chr21:30592035-30592227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
48, 16
               

               
Conread position:
               
301-500
               

               
Cow position:
               
chr21:8426721-8426525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
48, 17
               

               
Conread position:
               
302-462
               

               
Cow position:
               
chr21:41156151-41155981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
302-503
               

               
Cow position:
               
chr21:71864-71663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
47, 15
               

               
Conread position:
               
303-468
               

               
Cow position:
               
chr21:27744307-27744130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
303-503
               

               
Cow position:
               
chr21:30658139-30657946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
46, 91
               

               
Conread position:
               
304-476
               

               
Cow position:
               
chr21:45970905-45971077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
45, 14
               

               
Conread position:
               
304-499
               

               
Cow position:
               
chr21:18568356-18568559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
12, 174
               

               
Conread position:
               
305-453
               

               
Cow position:
               
chr21:46609727-46609884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
305-462
               

               
Cow position:
               
chr21:3595769-3595924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
92, 36
               

               
Conread position:
               
305-463
               

               
Cow position:
               
chr21:31658877-31659041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
305-468
               

               
Cow position:
               
chr21:16498792-16498621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
305-468
               

               
Cow position:
               
chr21:18055854-18056024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
41, 18
               

               
Conread position:
               
305-468
               

               
Cow position:
               
chr21:44658837-44658672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
41, 94
               

               
Conread position:
               
305-468
               

               
Cow position:
               
chr21:45376223-45376053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
305-498
               

               
Cow position:
               
chr21:16797128-16796932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
86, 173
               

               
Conread position:
               
305-502
               

               
Cow position:
               
chr21:10264311-10264110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
44, 125
               

               
Conread position:
               
305-502
               

               
Cow position:
               
chr21:14452509-14452311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
87, 48
               

               
Conread position:
               
305-503
               

               
Cow position:
               
chr21:7169964-7169764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
20, 167
               

               
Conread position:
               
305-503
               

               
Cow position:
               
chr21:27810665-27810466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
32, 13
               

               
Conread position:
               
305-503
               

               
Cow position:
               
chr21:33580688-33580496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
18, 66
               

               
Conread position:
               
305-503
               

               
Cow position:
               
chr21:46972889-46973074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
30, 66
               

               
Conread position:
               
306-455
               

               
Cow position:
               
chr21:23783572-23783724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
306-460
               

               
Cow position:
               
chr21:23568500-23568341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
16, 11
               

               
Conread position:
               
306-463
               

               
Cow position:
               
chr21:8558199-8558365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
306-468
               

               
Cow position:
               
chr21:18495492-18495326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
21, 92
               

               
Conread position:
               
306-468
               

               
Cow position:
               
chr21:40930201-40930370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
306-498
               

               
Cow position:
               
chr21:6292024-6291822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
43, 178
               

               
Conread position:
               
306-499
               

               
Cow position:
               
chr21:44214386-44214207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
42, 100
               

               
Conread position:
               
306-502
               

               
Cow position:
               
chr21:41590291-41590488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
43, 170
               

               
Conread position:
               
306-503
               

               
Cow position:
               
chr21:19868687-19868879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
43, 92
               

               
Conread position:
               
306-503
               

               
Cow position:
               
chr21:42135343-42135540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
17, 169
               

               
Conread position:
               
306-503
               

               
Cow position:
               
chr21:46599633-46599437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
40, 163
               

               
Conread position:
               
307-438
               

               
Cow position:
               
chr21:2904031-2904170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
77, 11
               

               
Conread position:
               
307-463
               

               
Cow position:
               
chr21:31279528-31279366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
307-468
               

               
Cow position:
               
chr21:22014465-22014295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
39, 74
               

               
Conread position:
               
307-498
               

               
Cow position:
               
chr21:1511560-1511362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
307-503
               

               
Cow position:
               
chr21:12461695-12461891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
42, 168
               

               
Conread position:
               
308-468
               

               
Cow position:
               
chr21:23535986-23535814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
308-483
               

               
Cow position:
               
chr21:36398297-36398474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
38, 21
               

               
Conread position:
               
308-499
               

               
Cow position:
               
chr21:17184190-17183997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
41, 14
               

               
Conread position:
               
308-499
               

               
Cow position:
               
chr21:24797928-24797725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
308-500
               

               
Cow position:
               
chr21:39394023-39393827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
9, 165
               

               
Conread position:
               
308-503
               

               
Cow position:
               
chr21:39403254-39403449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
15, 161
               

               
Conread position:
               
309-498
               

               
Cow position:
               
chr21:25014767-25014957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
15, 90
               

               
Conread position:
               
309-502
               

               
Cow position:
               
chr21:23587144-23586959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
37, 74
               

               
Conread position:
               
309-503
               

               
Cow position:
               
chr21:29213887-29214084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
76, 29
               

               
Conread position:
               
310-503
               

               
Cow position:
               
chr21:1735114-1735302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
39, 155
               

               
Conread position:
               
311-463
               

               
Cow position:
               
chr21:38449181-38449339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
311-503
               

               
Cow position:
               
chr21:12104623-12104441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
31, 83
               

               
Conread position:
               
311-503
               

               
Cow position:
               
chr21:32559100-32559289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
6, 88
               

               
Conread position:
               
311-503
               

               
Cow position:
               
chr21:40820583-40820777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
38, 7
               

               
Conread position:
               
312-503
               

               
Cow position:
               
chr21:37299729-37299538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
37, 163
               

               
Conread position:
               
314-449
               

               
Cow position:
               
chr21:37479323-37479469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
314-463
               

               
Cow position:
               
chr21:46848865-46849018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
314-485
               

               
Cow position:
               
chr21:29418840-29418655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
314-496
               

               
Cow position:
               
chr21:16152708-16152517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
314-499
               

               
Cow position:
               
chr21:6051772-6051583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
32, 161
               

               
Conread position:
               
314-501
               

               
Cow position:
               
chr21:6998208-6998025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
35, 67
               

               
Conread position:
               
314-502
               

               
Cow position:
               
chr21:8506280-8506469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
35, 162
               

               
Conread position:
               
314-502
               

               
Cow position:
               
chr21:8509168-8509357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
35, 162
               

               
Conread position:
               
314-502
               

               
Cow position:
               
chr21:9416509-9416327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
13, 36
               

               
Conread position:
               
314-503
               

               
Cow position:
               
chr21:802056-802241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
35, 85
               

               
Conread position:
               
314-503
               

               
Cow position:
               
chr21:5898142-5898325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
28, 86
               

               
Conread position:
               
314-503
               

               
Cow position:
               
chr21:11739854-11740043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
35, 13
               

               
Conread position:
               
314-503
               

               
Cow position:
               
chr21:25012345-25012158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
32, 118
               

               
Conread position:
               
314-503
               

               
Cow position:
               
chr21:32339478-32339664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
35, 69
               

               
Conread position:
               
315-468
               

               
Cow position:
               
chr21:11678056-11678207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
34, 74
               

               
Conread position:
               
316-485
               

               
Cow position:
               
chr21:2294278-2294110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
19, 45
               

               
Conread position:
               
317-456
               

               
Cow position:
               
chr21:37110931-37110788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
14, 73
               

               
Conread position:
               
318-468
               

               
Cow position:
               
chr21:22851178-22851025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
24, 77
               

               
Conread position:
               
319-452
               

               
Cow position:
               
chr21:24222255-24222392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
319-460
               

               
Cow position:
               
chr21:17857027-17856878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
30, 112
               

               
Conread position:
               
319-463
               

               
Cow position:
               
chr21:8358967-8359115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
319-468
               

               
Cow position:
               
chr21:36763324-36763166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
319-468
               

               
Cow position:
               
chr21:41522151-41522310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
75, 30
               

               
Conread position:
               
319-482
               

               
Cow position:
               
chr21:7768688-7768527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
84, 30
               

               
Conread position:
               
319-485
               

               
Cow position:
               
chr21:26735659-26735492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
28, 79
               

               
Conread position:
               
319-494
               

               
Cow position:
               
chr21:14126534-14126362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
18, 75
               

               
Conread position:
               
319-500
               

               
Cow position:
               
chr21:643582-643403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
72, 154
               

               
Conread position:
               
319-501
               

               
Cow position:
               
chr21:30222604-30222423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
28, 155
               

               
Conread position:
               
319-502
               

               
Cow position:
               
chr21:3763489-3763665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
319-502
               

               
Cow position:
               
chr21:21616038-21615859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
69, 152
               

               
Conread position:
               
319-503
               

               
Cow position:
               
chr21:641846-641663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
30, 155
               

               
Conread position:
               
319-503
               

               
Cow position:
               
chr21:674930-674761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
27, 115
               

               
Conread position:
               
319-503
               

               
Cow position:
               
chr21:6851427-6851248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
30, 88
               

               
Conread position:
               
319-503
               

               
Cow position:
               
chr21:7673375-7673199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
29, 75
               

               
Conread position:
               
319-503
               

               
Cow position:
               
chr21:11644704-11644890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
27, 158
               

               
Conread position:
               
319-503
               

               
Cow position:
               
chr21:13883739-13883557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
78, 26
               

               
Conread position:
               
319-503
               

               
Cow position:
               
chr21:20163970-20163784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
19, 44
               

               
Conread position:
               
319-503
               

               
Cow position:
               
chr21:28030541-28030365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
84, 34
               

               
Conread position:
               
319-503
               

               
Cow position:
               
chr21:29069061-29069251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
30, 162
               

               
Conread position:
               
319-503
               

               
Cow position:
               
chr21:37480226-37480031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
320-468
               

               
Cow position:
               
chr21:8349583-8349433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
320-485
               

               
Cow position:
               
chr21:21159064-21158898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
29, 76
               

               
Conread position:
               
320-503
               

               
Cow position:
               
chr21:17252716-17252902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
28, 159
               

               
Conread position:
               
320-503
               

               
Cow position:
               
chr21:24858577-24858391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
29, 127
               

               
Conread position:
               
320-503
               

               
Cow position:
               
chr21:42146405-42146222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
23, 64
               

               
Conread position:
               
321-461
               

               
Cow position:
               
chr21:28244727-28244582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
321-468
               

               
Cow position:
               
chr21:7460865-7460712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
321-468
               

               
Cow position:
               
chr21:15271179-15271332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
321-485
               

               
Cow position:
               
chr21:18341479-18341309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
67, 160
               

               
Conread position:
               
321-499
               

               
Cow position:
               
chr21:28907289-28907476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
321-501
               

               
Cow position:
               
chr21:14516200-14516027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
28, 127
               

               
Conread position:
               
321-502
               

               
Cow position:
               
chr21:30938406-30938590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
28, 151
               

               
Conread position:
               
321-503
               

               
Cow position:
               
chr21:24875612-24875428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
28, 155
               

               
Conread position:
               
322-445
               

               
Cow position:
               
chr21:3236762-3236638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
25, 79
               

               
Conread position:
               
322-463
               

               
Cow position:
               
chr21:34738830-34738688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
81, 26
               

               
Conread position:
               
322-468
               

               
Cow position:
               
chr21:30970194-30970040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
322-468
               

               
Cow position:
               
chr21:43655961-43655807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
27, 109
               

               
Conread position:
               
322-479
               

               
Cow position:
               
chr21:16119903-16120067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
322-487
               

               
Cow position:
               
chr21:7208515-7208684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
12, 74
               

               
Conread position:
               
322-498
               

               
Cow position:
               
chr21:24598902-24598740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
322-499
               

               
Cow position:
               
chr21:36508489-36508310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
69, 155
               

               
Conread position:
               
322-503
               

               
Cow position:
               
chr21:30848689-30848865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
21, 79
               

               
Conread position:
               
323-455
               

               
Cow position:
               
chr21:38867120-38867249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
24, 65
               

               
Conread position:
               
324-441
               

               
Cow position:
               
chr21:14324374-14324490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
324-468
               

               
Cow position:
               
chr21:32536648-32536501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
328-499
               

               
Cow position:
               
chr21:17193495-17193671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
20, 140
               

               
Conread position:
               
330-485
               

               
Cow position:
               
chr21:8351043-8351204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
19, 155
               

               
Conread position:
               
332-503
               

               
Cow position:
               
chr21:30243438-30243605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
22, 76
               

               
Conread position:
               
340-462
               

               
Cow position:
               
chr21:31691713-31691593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
8, 63
               

               
Conread position:
               
341-503
               

               
Cow position:
               
chr21:828973-829132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
50, 80
               

               
Conread position:
               
341-503
               

               
Cow position:
               
chr21:3360779-3360940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
53, 127
               

               
Conread position:
               
345-483
               

               
Cow position:
               
chr21:41287563-41287705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
349-502
               

               
Cow position:
               
chr21:6735964-6736112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
54, 121
               

               
Conread position:
               
362-463
               

               
Cow position:
               
chr21:45329738-45329840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
381-503
               

               
Cow position:
               
chr21:5341899-5342018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
8, 86
               
Show alignments to all cow chromosomes.