Cow genome map
| Conread name: | rtra25_l14r1.y1 |
| Conread position: | 211-468 |
| Cow position: | chr27:4195208-4195462 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 184 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 14, 33 |
| Conread position: | 218-468 |
| Cow position: | chr27:22747981-22748243 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 231-502 |
| Cow position: | chr27:15865278-15865550 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 48, 15 |
| Conread position: | 251-458 |
| Cow position: | chr27:22151003-22150789 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 21, 70 |
| Conread position: | 266-476 |
| Cow position: | chr27:24358042-24358256 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 13, 43 |
| Conread position: | 266-503 |
| Cow position: | chr27:10404412-10404172 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 21, 16 |
| Conread position: | 267-503 |
| Cow position: | chr27:26481494-26481251 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 37, 21 |
| Conread position: | 271-463 |
| Cow position: | chr27:16505201-16505000 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 14, 114 |
| Conread position: | 272-503 |
| Cow position: | chr27:23560323-23560087 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 18, 209 |
| Conread position: | 274-502 |
| Cow position: | chr27:16965282-16965522 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 20, 208 |
| Conread position: | 279-485 |
| Cow position: | chr27:29431196-29431401 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 71, 39 |
| Conread position: | 280-468 |
| Cow position: | chr27:5553191-5553385 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 16, 40 |
| Conread position: | 281-477 |
| Cow position: | chr27:21101571-21101366 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 61, 38 |
| Conread position: | 282-447 |
| Cow position: | chr27:24952230-24952060 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 67, 11 |
| Conread position: | 283-497 |
| Cow position: | chr27:15867110-15867333 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 18, 214 |
| Conread position: | 284-443 |
| Cow position: | chr27:21993978-21993813 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 284-459 |
| Cow position: | chr27:28922173-28921986 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 12, 20 |
| Conread position: | 284-497 |
| Cow position: | chr27:31386905-31386693 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 69, 34 |
| Conread position: | 284-503 |
| Cow position: | chr27:6162681-6162466 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 37, 114 |
| Conread position: | 285-493 |
| Cow position: | chr27:26939802-26940013 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 64, 185 |
| Conread position: | 285-503 |
| Cow position: | chr27:426699-426913 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 64, 28 |
| Conread position: | 286-499 |
| Cow position: | chr27:9504282-9504505 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 61, 11 |
| Conread position: | 286-503 |
| Cow position: | chr27:26226562-26226346 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 63, 7 |
| Conread position: | 287-462 |
| Cow position: | chr27:21448096-21447920 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 62, 111 |
| Conread position: | 287-503 |
| Cow position: | chr27:28016008-28015779 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 61, 32 |
| Conread position: | 289-468 |
| Cow position: | chr27:16478593-16478421 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 57, 9 |
| Conread position: | 289-499 |
| Cow position: | chr27:29593894-29593679 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 102, 16 |
| Conread position: | 289-503 |
| Cow position: | chr27:14670652-14670438 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 60, 182 |
| Conread position: | 289-503 |
| Cow position: | chr27:22220275-22220498 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 34, 195 |
| Conread position: | 290-468 |
| Cow position: | chr27:21419454-21419275 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 38, 27 |
| Conread position: | 290-503 |
| Cow position: | chr27:11480910-11480692 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 33, 186 |
| Conread position: | 290-503 |
| Cow position: | chr27:27529085-27528876 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 35, 13 |
| Conread position: | 291-437 |
| Cow position: | chr27:10867929-10867780 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 291-468 |
| Cow position: | chr27:29598014-29597832 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 58, 23 |
| Conread position: | 291-503 |
| Cow position: | chr27:4398753-4398547 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 58, 14 |
| Conread position: | 292-499 |
| Cow position: | chr27:20828972-20828770 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 107, 27 |
| Conread position: | 292-501 |
| Cow position: | chr27:18491299-18491498 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 100, 22 |
| Conread position: | 293-468 |
| Cow position: | chr27:15315259-15315434 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 56, 18 |
| Conread position: | 293-468 |
| Cow position: | chr27:19779609-19779792 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 9, 27 |
| Conread position: | 293-503 |
| Cow position: | chr27:19741661-19741464 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 14, 105 |
| Conread position: | 294-467 |
| Cow position: | chr27:29614774-29614956 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 5, 146 |
| Conread position: | 295-463 |
| Cow position: | chr27:25382403-25382241 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 295-468 |
| Cow position: | chr27:26437390-26437206 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 295-503 |
| Cow position: | chr27:18435395-18435189 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 53, 27 |
| Conread position: | 295-503 |
| Cow position: | chr27:19717647-19717859 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 33, 179 |
| Conread position: | 295-503 |
| Cow position: | chr27:31169375-31169166 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 13, 116 |
| Conread position: | 296-463 |
| Cow position: | chr27:11982910-11982736 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 54, 22 |
| Conread position: | 296-463 |
| Cow position: | chr27:13940822-13940647 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 10, 60 |
| Conread position: | 297-493 |
| Cow position: | chr27:20081391-20081188 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 49, 21 |
| Conread position: | 297-503 |
| Cow position: | chr27:22035637-22035433 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 16, 110 |
| Conread position: | 298-463 |
| Cow position: | chr27:22212912-22213068 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 298-466 |
| Cow position: | chr27:29961839-29961669 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 51, 85 |
| Conread position: | 298-468 |
| Cow position: | chr27:13251768-13251932 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 138, 31 |
| Conread position: | 298-468 |
| Cow position: | chr27:16103548-16103725 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 45, 147 |
| Conread position: | 298-488 |
| Cow position: | chr27:11349021-11349216 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 30, 140 |
| Conread position: | 298-498 |
| Cow position: | chr27:20514558-20514770 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 20, 51 |
| Conread position: | 298-503 |
| Cow position: | chr27:11133824-11134030 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 19, 178 |
| Conread position: | 299-500 |
| Cow position: | chr27:20888473-20888661 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 51, 92 |
| Conread position: | 299-503 |
| Cow position: | chr27:2949577-2949383 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 53, 18 |
| Conread position: | 300-468 |
| Cow position: | chr27:178602-178778 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 300-468 |
| Cow position: | chr27:27856079-27856248 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 45, 5 |
| Conread position: | 300-502 |
| Cow position: | chr27:31210292-31210490 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 48, 5 |
| Conread position: | 301-463 |
| Cow position: | chr27:22497770-22497932 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 44, 18 |
| Conread position: | 301-477 |
| Cow position: | chr27:19387760-19387943 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 301-486 |
| Cow position: | chr27:22547648-22547465 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 49, 95 |
| Conread position: | 301-498 |
| Cow position: | chr27:24035538-24035337 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 14, 179 |
| Conread position: | 301-502 |
| Cow position: | chr27:16704990-16705194 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 22, 173 |
| Conread position: | 302-463 |
| Cow position: | chr27:22792577-22792742 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 20, 95 |
| Conread position: | 302-468 |
| Cow position: | chr27:26617155-26617324 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 15, 108 |
| Conread position: | 302-503 |
| Cow position: | chr27:11561516-11561720 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 41, 172 |
| Conread position: | 303-438 |
| Cow position: | chr27:20302318-20302452 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 45, 93 |
| Conread position: | 303-468 |
| Cow position: | chr27:23484956-23485127 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 303-502 |
| Cow position: | chr27:28932061-28931859 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 14, 172 |
| Conread position: | 304-468 |
| Cow position: | chr27:9977429-9977598 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 44, 92 |
| Conread position: | 304-502 |
| Cow position: | chr27:4944765-4944571 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 11, 84 |
| Conread position: | 305-455 |
| Cow position: | chr27:2934252-2934406 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 37, 59 |
| Conread position: | 305-463 |
| Cow position: | chr27:15434076-15434235 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 9, 45 |
| Conread position: | 305-468 |
| Cow position: | chr27:15453957-15454126 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 305-468 |
| Cow position: | chr27:20897276-20897106 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 305-468 |
| Cow position: | chr27:22180022-22179851 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 305-468 |
| Cow position: | chr27:27632851-27632686 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 17, 69 |
| Conread position: | 305-485 |
| Cow position: | chr27:31498527-31498716 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 92, 120 |
| Conread position: | 305-498 |
| Cow position: | chr27:12459037-12459225 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 76, 26 |
| Conread position: | 305-500 |
| Cow position: | chr27:30884772-30884969 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 29, 46 |
| Conread position: | 305-501 |
| Cow position: | chr27:20241512-20241308 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 18, 42 |
| Conread position: | 305-503 |
| Cow position: | chr27:16246550-16246751 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 18, 31 |
| Conread position: | 305-503 |
| Cow position: | chr27:16284234-16284419 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 44, 17 |
| Conread position: | 305-503 |
| Cow position: | chr27:23594063-23594265 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 37, 168 |
| Conread position: | 305-503 |
| Cow position: | chr27:24223700-24223896 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 81, 12 |
| Conread position: | 305-503 |
| Cow position: | chr27:31231334-31231137 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 44, 24 |
| Conread position: | 306-463 |
| Cow position: | chr27:23760229-23760071 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 37, 11 |
| Conread position: | 306-463 |
| Cow position: | chr27:26317809-26317976 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 12, 23 |
| Conread position: | 306-465 |
| Cow position: | chr27:28192867-28192703 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 306-468 |
| Cow position: | chr27:2592284-2592457 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 43, 12 |
| Conread position: | 306-468 |
| Cow position: | chr27:10581279-10581448 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 43, 150 |
| Conread position: | 306-494 |
| Cow position: | chr27:19557143-19557324 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 36, 12 |
| Conread position: | 306-499 |
| Cow position: | chr27:27450139-27449945 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 13, 170 |
| Conread position: | 306-502 |
| Cow position: | chr27:20749255-20749057 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 41, 12 |
| Conread position: | 306-502 |
| Cow position: | chr27:31004685-31004878 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 8, 44 |
| Conread position: | 306-503 |
| Cow position: | chr27:13204210-13204403 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 41, 166 |
| Conread position: | 306-503 |
| Cow position: | chr27:17397706-17397510 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 163 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 37, 172 |
| Conread position: | 307-468 |
| Cow position: | chr27:31153809-31153642 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 307-485 |
| Cow position: | chr27:6106450-6106637 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 307-501 |
| Cow position: | chr27:14343689-14343496 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 42, 92 |
| Conread position: | 307-503 |
| Cow position: | chr27:7343682-7343484 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 39, 117 |
| Conread position: | 307-503 |
| Cow position: | chr27:19508757-19508957 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 16, 173 |
| Conread position: | 307-503 |
| Cow position: | chr27:19576577-19576379 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 164 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 30, 162 |
| Conread position: | 308-483 |
| Cow position: | chr27:15669027-15668841 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 308-499 |
| Cow position: | chr27:1637179-1636985 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 38, 86 |
| Conread position: | 308-499 |
| Cow position: | chr27:26400973-26400771 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 9, 78 |
| Conread position: | 308-503 |
| Cow position: | chr27:20048386-20048578 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 42, 10 |
| Conread position: | 309-468 |
| Cow position: | chr27:21660884-21661051 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 310-489 |
| Cow position: | chr27:28476359-28476178 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 32, 171 |
| Conread position: | 311-502 |
| Cow position: | chr27:1067326-1067511 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 158, 0 |
| Conread position: | 311-502 |
| Cow position: | chr27:23918284-23918097 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 37, 108 |
| Conread position: | 311-503 |
| Cow position: | chr27:24693168-24693357 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 38, 147 |
| Conread position: | 312-503 |
| Cow position: | chr27:22386639-22386819 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 37, 84 |
| Conread position: | 313-466 |
| Cow position: | chr27:20283397-20283549 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 34, 10 |
| Conread position: | 314-463 |
| Cow position: | chr27:28062441-28062288 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 35, 81 |
| Conread position: | 314-468 |
| Cow position: | chr27:11528682-11528846 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 314-468 |
| Cow position: | chr27:27606541-27606381 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 314-468 |
| Cow position: | chr27:28206557-28206717 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 314-494 |
| Cow position: | chr27:3498309-3498491 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 36, 174 |
| Conread position: | 314-503 |
| Cow position: | chr27:28478335-28478524 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 25, 80 |
| Conread position: | 315-494 |
| Cow position: | chr27:20325111-20325286 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 34, 87 |
| Conread position: | 315-503 |
| Cow position: | chr27:22171056-22171241 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 34, 68 |
| Conread position: | 319-448 |
| Cow position: | chr27:23527741-23527606 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 319-461 |
| Cow position: | chr27:20561346-20561490 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 30, 78 |
| Conread position: | 319-463 |
| Cow position: | chr27:11208799-11208644 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 319-467 |
| Cow position: | chr27:31219031-31219179 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 74, 30 |
| Conread position: | 319-468 |
| Cow position: | chr27:2036484-2036635 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 319-468 |
| Cow position: | chr27:27055054-27055204 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 24, 79 |
| Conread position: | 319-485 |
| Cow position: | chr27:26087078-26087249 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 319-489 |
| Cow position: | chr27:9253354-9253183 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 28, 153 |
| Conread position: | 319-499 |
| Cow position: | chr27:7412151-7412333 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 11, 158 |
| Conread position: | 319-502 |
| Cow position: | chr27:27389269-27389080 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 30, 158 |
| Conread position: | 319-503 |
| Cow position: | chr27:6319680-6319863 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 14, 155 |
| Conread position: | 319-503 |
| Cow position: | chr27:15003221-15003034 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 34, 155 |
| Conread position: | 319-503 |
| Cow position: | chr27:20770758-20770584 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 30, 43 |
| Conread position: | 319-503 |
| Cow position: | chr27:21669349-21669173 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 45, 25 |
| Conread position: | 319-503 |
| Cow position: | chr27:23452221-23452405 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 30, 157 |
| Conread position: | 321-463 |
| Cow position: | chr27:31157570-31157722 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 28, 106 |
| Conread position: | 321-493 |
| Cow position: | chr27:299614-299438 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 26, 55 |
| Conread position: | 322-462 |
| Cow position: | chr27:12596543-12596686 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 322-463 |
| Cow position: | chr27:2957178-2957322 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 322-468 |
| Cow position: | chr27:31248845-31248694 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 322-485 |
| Cow position: | chr27:25790064-25790229 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 64, 157 |
| Conread position: | 322-496 |
| Cow position: | chr27:24440456-24440285 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 80, 23 |
| Conread position: | 322-498 |
| Cow position: | chr27:21951219-21951032 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 322-503 |
| Cow position: | chr27:7425427-7425244 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 25, 150 |
| Conread position: | 322-503 |
| Cow position: | chr27:26643464-26643629 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 27, 48 |
| Conread position: | 326-503 |
| Cow position: | chr27:1184408-1184233 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 22, 136 |
| Conread position: | 326-503 |
| Cow position: | chr27:15409260-15409092 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 21, 61 |
| Conread position: | 327-468 |
| Cow position: | chr27:26909822-26909676 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 327-489 |
| Cow position: | chr27:31031233-31031385 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 332-468 |
| Cow position: | chr27:23890704-23890853 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 337-463 |
| Cow position: | chr27:1768841-1768713 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 57, 12 |
| Conread position: | 338-503 |
| Cow position: | chr27:21025473-21025630 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 341-468 |
| Cow position: | chr27:23477731-23477861 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 109 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 46, 85 |
| Conread position: | 345-457 |
| Cow position: | chr27:624429-624314 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 44, 95 |
| Conread position: | 345-462 |
| Cow position: | chr27:641250-641136 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 94 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 345-467 |
| Cow position: | chr27:23100857-23100734 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 49, 62 |
| Conread position: | 345-503 |
| Cow position: | chr27:26238811-26238969 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 43, 130 |
| Conread position: | 354-503 |
| Cow position: | chr27:30489610-30489466 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 49, 24 |
| Conread position: | 355-468 |
| Cow position: | chr27:19685915-19685798 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 34, 0 |
Show alignments to all cow chromosomes.