Cow genome map
| Conread name: | rtra25_l14r1.y1 |
| Conread position: | 199-468 |
| Cow position: | chr29:22729883-22729606 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 37, 11 |
| Conread position: | 259-503 |
| Cow position: | chr29:34773488-34773727 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 15, 124 |
| Conread position: | 262-468 |
| Cow position: | chr29:15947425-15947206 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 265-468 |
| Cow position: | chr29:17110207-17109996 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 39, 13 |
| Conread position: | 265-468 |
| Cow position: | chr29:17155007-17154817 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 27, 14 |
| Conread position: | 266-463 |
| Cow position: | chr29:16735478-16735268 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 7, 56 |
| Conread position: | 266-468 |
| Cow position: | chr29:32894507-32894302 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 56, 18 |
| Conread position: | 267-464 |
| Cow position: | chr29:3192675-3192872 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 114, 10 |
| Conread position: | 269-464 |
| Cow position: | chr29:22720404-22720599 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 18, 9 |
| Conread position: | 271-463 |
| Cow position: | chr29:1959707-1959902 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 31, 8 |
| Conread position: | 272-499 |
| Cow position: | chr29:396645-396415 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 77, 45 |
| Conread position: | 274-444 |
| Cow position: | chr29:6686413-6686580 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 75, 24 |
| Conread position: | 275-483 |
| Cow position: | chr29:5046894-5046675 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 29, 14 |
| Conread position: | 277-468 |
| Cow position: | chr29:10191805-10192000 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 48, 11 |
| Conread position: | 278-452 |
| Cow position: | chr29:10839176-10838996 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 70, 20 |
| Conread position: | 279-468 |
| Cow position: | chr29:43441270-43441454 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 53, 109 |
| Conread position: | 281-503 |
| Cow position: | chr29:22032413-22032632 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 15, 38 |
| Conread position: | 282-463 |
| Cow position: | chr29:8163597-8163785 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 67, 11 |
| Conread position: | 284-463 |
| Cow position: | chr29:23698201-23698022 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 63, 19 |
| Conread position: | 284-468 |
| Cow position: | chr29:936435-936246 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 284-493 |
| Cow position: | chr29:38754707-38754919 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 24, 35 |
| Conread position: | 284-503 |
| Cow position: | chr29:40350852-40351065 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 65, 25 |
| Conread position: | 285-476 |
| Cow position: | chr29:1008053-1007852 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 37, 145 |
| Conread position: | 286-468 |
| Cow position: | chr29:23812819-23813000 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 119, 33 |
| Conread position: | 286-476 |
| Cow position: | chr29:40112614-40112414 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 27, 190 |
| Conread position: | 286-493 |
| Cow position: | chr29:10846845-10847052 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 105, 19 |
| Conread position: | 287-463 |
| Cow position: | chr29:32963752-32963581 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 91, 62 |
| Conread position: | 287-478 |
| Cow position: | chr29:41112660-41112853 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 21, 79 |
| Conread position: | 288-468 |
| Cow position: | chr29:35292317-35292132 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 35, 115 |
| Conread position: | 288-503 |
| Cow position: | chr29:7290995-7290786 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 44, 17 |
| Conread position: | 289-463 |
| Cow position: | chr29:4647985-4648165 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 34, 9 |
| Conread position: | 289-463 |
| Cow position: | chr29:23142105-23142290 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 290-391 |
| Cow position: | chr29:35070849-35070948 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 86 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 290-489 |
| Cow position: | chr29:1615149-1614946 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 62, 23 |
| Conread position: | 293-453 |
| Cow position: | chr29:14746997-14746834 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 56, 21 |
| Conread position: | 293-468 |
| Cow position: | chr29:22028735-22028916 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 293-498 |
| Cow position: | chr29:6636302-6636087 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 27, 140 |
| Conread position: | 293-501 |
| Cow position: | chr29:19949527-19949322 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 172 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 56, 12 |
| Conread position: | 294-468 |
| Cow position: | chr29:23678920-23678748 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 55, 19 |
| Conread position: | 295-503 |
| Cow position: | chr29:29769133-29769341 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 54, 169 |
| Conread position: | 297-503 |
| Cow position: | chr29:31982038-31981841 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 52, 21 |
| Conread position: | 298-435 |
| Cow position: | chr29:659500-659354 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 298-468 |
| Cow position: | chr29:14761666-14761493 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 298-468 |
| Cow position: | chr29:28420973-28420794 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 51, 20 |
| Conread position: | 298-468 |
| Cow position: | chr29:42646273-42646089 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 298-468 |
| Cow position: | chr29:42798179-42797995 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 298-503 |
| Cow position: | chr29:4440989-4441195 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 51, 7 |
| Conread position: | 299-461 |
| Cow position: | chr29:36546563-36546736 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 299-467 |
| Cow position: | chr29:27997032-27997210 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 41, 18 |
| Conread position: | 299-468 |
| Cow position: | chr29:38732372-38732192 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 299-499 |
| Cow position: | chr29:9709911-9709709 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 16, 88 |
| Conread position: | 299-503 |
| Cow position: | chr29:12680376-12680166 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 12, 178 |
| Conread position: | 299-503 |
| Cow position: | chr29:39038051-39038259 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 11, 22 |
| Conread position: | 299-503 |
| Cow position: | chr29:40117783-40117582 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 21, 153 |
| Conread position: | 300-503 |
| Cow position: | chr29:8634869-8634664 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 16, 73 |
| Conread position: | 300-503 |
| Cow position: | chr29:35501449-35501644 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 49, 72 |
| Conread position: | 301-468 |
| Cow position: | chr29:4070838-4070663 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 301-468 |
| Cow position: | chr29:5893062-5892884 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 301-484 |
| Cow position: | chr29:24660891-24660709 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 48, 17 |
| Conread position: | 301-502 |
| Cow position: | chr29:36531083-36530878 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 22, 174 |
| Conread position: | 302-463 |
| Cow position: | chr29:29296603-29296438 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 23, 94 |
| Conread position: | 302-468 |
| Cow position: | chr29:9378849-9378676 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 302-490 |
| Cow position: | chr29:38979865-38980057 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 25, 82 |
| Conread position: | 302-503 |
| Cow position: | chr29:17804744-17804545 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 47, 155 |
| Conread position: | 302-503 |
| Cow position: | chr29:42363805-42364006 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 44, 165 |
| Conread position: | 303-455 |
| Cow position: | chr29:31593943-31594093 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 21, 94 |
| Conread position: | 303-457 |
| Cow position: | chr29:12025266-12025425 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 86, 143 |
| Conread position: | 303-503 |
| Cow position: | chr29:12890889-12890695 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 42, 170 |
| Conread position: | 305-427 |
| Cow position: | chr29:34919251-34919379 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 305-453 |
| Cow position: | chr29:25669296-25669148 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 18, 91 |
| Conread position: | 305-454 |
| Cow position: | chr29:22736565-22736416 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 40, 75 |
| Conread position: | 305-467 |
| Cow position: | chr29:27929975-27929808 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 44, 12 |
| Conread position: | 305-468 |
| Cow position: | chr29:7414705-7414540 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 83, 52 |
| Conread position: | 305-468 |
| Cow position: | chr29:20770555-20770383 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 305-468 |
| Cow position: | chr29:21592908-21592744 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 48, 11 |
| Conread position: | 305-468 |
| Cow position: | chr29:26275814-26275646 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 18, 86 |
| Conread position: | 305-484 |
| Cow position: | chr29:11489385-11489560 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 44, 14 |
| Conread position: | 305-499 |
| Cow position: | chr29:4874677-4874865 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 18, 80 |
| Conread position: | 305-503 |
| Cow position: | chr29:5408930-5409131 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 18, 127 |
| Conread position: | 305-503 |
| Cow position: | chr29:22162053-22162239 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 305-503 |
| Cow position: | chr29:22166876-22167068 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 41, 91 |
| Conread position: | 305-503 |
| Cow position: | chr29:31651612-31651421 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 44, 17 |
| Conread position: | 306-468 |
| Cow position: | chr29:28066688-28066526 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 68, 10 |
| Conread position: | 306-486 |
| Cow position: | chr29:6774698-6774881 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 11, 30 |
| Conread position: | 306-502 |
| Cow position: | chr29:9622499-9622681 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 43, 11 |
| Conread position: | 306-503 |
| Cow position: | chr29:10058330-10058525 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 9, 120 |
| Conread position: | 307-463 |
| Cow position: | chr29:24605106-24604940 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 307-503 |
| Cow position: | chr29:2056267-2056071 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 36, 11 |
| Conread position: | 307-503 |
| Cow position: | chr29:14577067-14576869 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 16, 170 |
| Conread position: | 307-503 |
| Cow position: | chr29:20167632-20167434 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 77, 46 |
| Conread position: | 307-503 |
| Cow position: | chr29:22613630-22613440 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 42, 121 |
| Conread position: | 307-503 |
| Cow position: | chr29:24624449-24624259 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 84, 12 |
| Conread position: | 308-468 |
| Cow position: | chr29:25092314-25092145 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 308-468 |
| Cow position: | chr29:41531062-41530889 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 8, 122 |
| Conread position: | 308-488 |
| Cow position: | chr29:40791504-40791324 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 47, 11 |
| Conread position: | 308-503 |
| Cow position: | chr29:15798157-15797962 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 81, 10 |
| Conread position: | 309-503 |
| Cow position: | chr29:732817-732631 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 40, 56 |
| Conread position: | 309-503 |
| Cow position: | chr29:18878275-18878471 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 82, 118 |
| Conread position: | 310-502 |
| Cow position: | chr29:36781104-36781293 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 39, 86 |
| Conread position: | 311-455 |
| Cow position: | chr29:36952109-36952248 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 38, 7 |
| Conread position: | 311-468 |
| Cow position: | chr29:17297343-17297175 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 311-488 |
| Cow position: | chr29:43088512-43088325 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 312-503 |
| Cow position: | chr29:19363911-19363721 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 36, 7 |
| Conread position: | 313-458 |
| Cow position: | chr29:33143154-33143305 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 36, 13 |
| Conread position: | 313-467 |
| Cow position: | chr29:5064967-5064815 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 313-468 |
| Cow position: | chr29:7443864-7444022 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 313-503 |
| Cow position: | chr29:34359621-34359811 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 19, 162 |
| Conread position: | 314-447 |
| Cow position: | chr29:11887463-11887328 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 32, 92 |
| Conread position: | 314-493 |
| Cow position: | chr29:7624367-7624199 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 314-499 |
| Cow position: | chr29:39639042-39638858 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 28, 108 |
| Conread position: | 314-503 |
| Cow position: | chr29:8926248-8926451 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 58, 170 |
| Conread position: | 314-503 |
| Cow position: | chr29:19762465-19762281 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 78, 155 |
| Conread position: | 314-503 |
| Cow position: | chr29:25737218-25737404 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 65, 15 |
| Conread position: | 315-447 |
| Cow position: | chr29:33550972-33551105 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 315-465 |
| Cow position: | chr29:22776277-22776121 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 315-468 |
| Cow position: | chr29:19742032-19741880 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 315-493 |
| Cow position: | chr29:40763495-40763674 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 34, 157 |
| Conread position: | 316-463 |
| Cow position: | chr29:36357328-36357170 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 316-468 |
| Cow position: | chr29:44981434-44981587 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 84, 134 |
| Conread position: | 319-468 |
| Cow position: | chr29:5520287-5520446 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 319-468 |
| Cow position: | chr29:19420423-19420574 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 319-469 |
| Cow position: | chr29:16561577-16561732 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 30, 117 |
| Conread position: | 319-483 |
| Cow position: | chr29:21666283-21666109 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 319-485 |
| Cow position: | chr29:19187223-19187050 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 31, 163 |
| Conread position: | 319-494 |
| Cow position: | chr29:29308385-29308556 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 30, 73 |
| Conread position: | 319-498 |
| Cow position: | chr29:28979319-28979495 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 156, 67 |
| Conread position: | 319-502 |
| Cow position: | chr29:22734909-22735094 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 27, 52 |
| Conread position: | 319-503 |
| Cow position: | chr29:5063340-5063155 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 30, 157 |
| Conread position: | 319-503 |
| Cow position: | chr29:26540343-26540530 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 30, 155 |
| Conread position: | 319-503 |
| Cow position: | chr29:36697954-36697767 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 71, 34 |
| Conread position: | 320-468 |
| Cow position: | chr29:43311346-43311509 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 321-468 |
| Cow position: | chr29:3293138-3292987 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 28, 100 |
| Conread position: | 322-441 |
| Cow position: | chr29:570650-570773 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 102 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 27, 58 |
| Conread position: | 322-452 |
| Cow position: | chr29:44985455-44985327 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 27, 74 |
| Conread position: | 322-478 |
| Cow position: | chr29:28196826-28196980 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 24, 72 |
| Conread position: | 322-492 |
| Cow position: | chr29:17282255-17282089 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 27, 49 |
| Conread position: | 322-492 |
| Cow position: | chr29:37293221-37293051 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 25, 74 |
| Conread position: | 322-503 |
| Cow position: | chr29:9310797-9310610 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 27, 153 |
| Conread position: | 322-503 |
| Cow position: | chr29:15796678-15796496 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 67, 148 |
| Conread position: | 323-466 |
| Cow position: | chr29:26779069-26778923 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 325-468 |
| Cow position: | chr29:1946724-1946869 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 18, 46 |
| Conread position: | 328-503 |
| Cow position: | chr29:4423262-4423429 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 21, 61 |
| Conread position: | 329-503 |
| Cow position: | chr29:39111137-39111301 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 20, 61 |
| Conread position: | 330-500 |
| Cow position: | chr29:32197880-32197710 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 18, 146 |
| Conread position: | 331-485 |
| Cow position: | chr29:4520517-4520357 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 334-499 |
| Cow position: | chr29:30548955-30548790 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 55, 137 |
| Conread position: | 337-503 |
| Cow position: | chr29:22723775-22723611 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 48, 136 |
| Conread position: | 337-503 |
| Cow position: | chr29:34358799-34358968 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 11, 141 |
| Conread position: | 341-503 |
| Cow position: | chr29:30206707-30206863 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 345-453 |
| Cow position: | chr29:42875558-42875667 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 90 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 53, 17 |
| Conread position: | 345-458 |
| Cow position: | chr29:42977861-42977747 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 46, 69 |
| Conread position: | 345-478 |
| Cow position: | chr29:41223332-41223194 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 58, 101 |
| Conread position: | 345-503 |
| Cow position: | chr29:23825044-23825200 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 45, 129 |
| Conread position: | 347-468 |
| Cow position: | chr29:34688744-34688868 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 347-486 |
| Cow position: | chr29:14227721-14227579 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 42, 65 |
| Conread position: | 348-502 |
| Cow position: | chr29:32176833-32176691 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 381-503 |
| Cow position: | chr29:17022278-17022160 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 22, 90 |
Show alignments to all cow chromosomes.