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Cow genome map

           
Conread name:
           
rtra25_l14r1.y1
        

               
Conread position:
               
156-503
               

               
Cow position:
               
chr4:58880605-58880956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
65, 48
               

               
Conread position:
               
247-467
               

               
Cow position:
               
chr4:58045376-58045601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
100, 27
               

               
Conread position:
               
248-468
               

               
Cow position:
               
chr4:21128386-21128169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
30, 35
               

               
Conread position:
               
254-468
               

               
Cow position:
               
chr4:2681582-2681363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
133, 34
               

               
Conread position:
               
254-503
               

               
Cow position:
               
chr4:21065285-21065041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
10, 31
               

               
Conread position:
               
259-454
               

               
Cow position:
               
chr4:69497359-69497163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
50, 22
               

               
Conread position:
               
263-468
               

               
Cow position:
               
chr4:13194202-13193998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
131, 56
               

               
Conread position:
               
266-466
               

               
Cow position:
               
chr4:1025994-1026201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
11, 28
               

               
Conread position:
               
268-444
               

               
Cow position:
               
chr4:63183442-63183624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
268-463
               

               
Cow position:
               
chr4:22127770-22127968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
16, 84
               

               
Conread position:
               
268-484
               

               
Cow position:
               
chr4:28660304-28660535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
11, 53
               

               
Conread position:
               
268-497
               

               
Cow position:
               
chr4:19315770-19316004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
79, 10
               

               
Conread position:
               
271-501
               

               
Cow position:
               
chr4:22071434-22071665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
119, 199
               

               
Conread position:
               
273-468
               

               
Cow position:
               
chr4:22546607-22546807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
16, 47
               

               
Conread position:
               
273-468
               

               
Cow position:
               
chr4:58248630-58248435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
113, 25
               

               
Conread position:
               
275-465
               

               
Cow position:
               
chr4:62317683-62317482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
45, 14
               

               
Conread position:
               
275-503
               

               
Cow position:
               
chr4:46566239-46566465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
76, 9
               

               
Conread position:
               
276-498
               

               
Cow position:
               
chr4:508676-508909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
40, 84
               

               
Conread position:
               
277-468
               

               
Cow position:
               
chr4:14020736-14020530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
278-503
               

               
Cow position:
               
chr4:19333620-19333391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
19, 196
               

               
Conread position:
               
280-468
               

               
Cow position:
               
chr4:34919046-34919236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
67, 39
               

               
Conread position:
               
280-468
               

               
Cow position:
               
chr4:39007722-39007538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
123, 9
               

               
Conread position:
               
280-503
               

               
Cow position:
               
chr4:22137988-22138217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
43, 18
               

               
Conread position:
               
281-463
               

               
Cow position:
               
chr4:33089710-33089889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
112, 45
               

               
Conread position:
               
282-479
               

               
Cow position:
               
chr4:66122141-66122345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
282-493
               

               
Cow position:
               
chr4:10410990-10410784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
193, 71
               

               
Conread position:
               
283-457
               

               
Cow position:
               
chr4:26549922-26549752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
42, 10
               

               
Conread position:
               
284-468
               

               
Cow position:
               
chr4:30944179-30943988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
284-484
               

               
Cow position:
               
chr4:12052111-12052312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
40, 133
               

               
Conread position:
               
284-502
               

               
Cow position:
               
chr4:10915605-10915830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
14, 84
               

               
Conread position:
               
284-503
               

               
Cow position:
               
chr4:44854062-44854286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
62, 119
               

               
Conread position:
               
285-463
               

               
Cow position:
               
chr4:45212963-45213148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
24, 34
               

               
Conread position:
               
285-468
               

               
Cow position:
               
chr4:69455400-69455594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
18, 169
               

               
Conread position:
               
285-478
               

               
Cow position:
               
chr4:40995961-40995754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
285-497
               

               
Cow position:
               
chr4:20124746-20124957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
58, 18
               

               
Conread position:
               
285-497
               

               
Cow position:
               
chr4:60302788-60303004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
33, 112
               

               
Conread position:
               
285-502
               

               
Cow position:
               
chr4:3283230-3283441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
13, 33
               

               
Conread position:
               
285-503
               

               
Cow position:
               
chr4:21391594-21391807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
9, 59
               

               
Conread position:
               
286-458
               

               
Cow position:
               
chr4:42608965-42608782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
18, 7
               

               
Conread position:
               
286-468
               

               
Cow position:
               
chr4:36290845-36290658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
286-468
               

               
Cow position:
               
chr4:45801739-45801549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
7, 57
               

               
Conread position:
               
286-503
               

               
Cow position:
               
chr4:4320769-4320994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
30, 195
               

               
Conread position:
               
286-503
               

               
Cow position:
               
chr4:8083586-8083791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
63, 17
               

               
Conread position:
               
288-503
               

               
Cow position:
               
chr4:16221654-16221872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
61, 30
               

               
Conread position:
               
288-503
               

               
Cow position:
               
chr4:61887861-61887641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
50, 26
               

               
Conread position:
               
289-468
               

               
Cow position:
               
chr4:43579196-43579379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
289-476
               

               
Cow position:
               
chr4:22331341-22331150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
35, 61
               

               
Conread position:
               
289-483
               

               
Cow position:
               
chr4:61608752-61608948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
58, 25
               

               
Conread position:
               
289-485
               

               
Cow position:
               
chr4:15236841-15236650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
60, 13
               

               
Conread position:
               
289-503
               

               
Cow position:
               
chr4:34369246-34369445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
63, 15
               

               
Conread position:
               
290-500
               

               
Cow position:
               
chr4:21275397-21275593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
290-502
               

               
Cow position:
               
chr4:13508022-13508235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
57, 23
               

               
Conread position:
               
290-503
               

               
Cow position:
               
chr4:19539017-19539232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
59, 15
               

               
Conread position:
               
290-503
               

               
Cow position:
               
chr4:48423090-48422882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
11, 85
               

               
Conread position:
               
291-462
               

               
Cow position:
               
chr4:47748629-47748451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
57, 12
               

               
Conread position:
               
291-497
               

               
Cow position:
               
chr4:479582-479781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
34, 7
               

               
Conread position:
               
291-503
               

               
Cow position:
               
chr4:42373936-42374151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
18, 188
               

               
Conread position:
               
292-458
               

               
Cow position:
               
chr4:69478446-69478283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
14, 29
               

               
Conread position:
               
293-427
               

               
Cow position:
               
chr4:45387039-45386896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
293-457
               

               
Cow position:
               
chr4:63198150-63198327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
50, 30
               

               
Conread position:
               
293-468
               

               
Cow position:
               
chr4:16513312-16513490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
56, 35
               

               
Conread position:
               
293-478
               

               
Cow position:
               
chr4:38946433-38946239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
50, 25
               

               
Conread position:
               
293-497
               

               
Cow position:
               
chr4:33360306-33360115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
56, 24
               

               
Conread position:
               
293-499
               

               
Cow position:
               
chr4:4084897-4085103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
53, 10
               

               
Conread position:
               
293-499
               

               
Cow position:
               
chr4:53347762-53347973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
25, 82
               

               
Conread position:
               
293-502
               

               
Cow position:
               
chr4:31178039-31177830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
30, 178
               

               
Conread position:
               
294-499
               

               
Cow position:
               
chr4:11099450-11099649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
55, 19
               

               
Conread position:
               
294-500
               

               
Cow position:
               
chr4:50494991-50494779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
55, 9
               

               
Conread position:
               
294-503
               

               
Cow position:
               
chr4:3688142-3687927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
55, 24
               

               
Conread position:
               
294-503
               

               
Cow position:
               
chr4:7430516-7430323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
295-468
               

               
Cow position:
               
chr4:48227481-48227654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
99, 31
               

               
Conread position:
               
295-476
               

               
Cow position:
               
chr4:17051070-17051260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
54, 85
               

               
Conread position:
               
296-463
               

               
Cow position:
               
chr4:8770302-8770137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
105, 35
               

               
Conread position:
               
296-463
               

               
Cow position:
               
chr4:57566482-57566650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
12, 23
               

               
Conread position:
               
296-500
               

               
Cow position:
               
chr4:3519632-3519429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
53, 178
               

               
Conread position:
               
297-436
               

               
Cow position:
               
chr4:61193134-61193274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
49, 8
               

               
Conread position:
               
297-460
               

               
Cow position:
               
chr4:14965025-14964870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
297-460
               

               
Cow position:
               
chr4:19504135-19503970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
20, 83
               

               
Conread position:
               
297-463
               

               
Cow position:
               
chr4:34722672-34722849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
297-503
               

               
Cow position:
               
chr4:20026893-20027098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
19, 27
               

               
Conread position:
               
297-503
               

               
Cow position:
               
chr4:56239651-56239855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
25, 176
               

               
Conread position:
               
298-427
               

               
Cow position:
               
chr4:10895420-10895553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
9, 110
               

               
Conread position:
               
298-437
               

               
Cow position:
               
chr4:19328793-19328649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
51, 136
               

               
Conread position:
               
298-460
               

               
Cow position:
               
chr4:19496768-19496944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
9, 22
               

               
Conread position:
               
298-463
               

               
Cow position:
               
chr4:348224-348386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
105, 20
               

               
Conread position:
               
298-463
               

               
Cow position:
               
chr4:2770281-2770112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
49, 21
               

               
Conread position:
               
298-463
               

               
Cow position:
               
chr4:40393022-40392854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
51, 104
               

               
Conread position:
               
298-463
               

               
Cow position:
               
chr4:59557648-59557479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
92, 20
               

               
Conread position:
               
298-466
               

               
Cow position:
               
chr4:20153346-20153513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
51, 17
               

               
Conread position:
               
298-468
               

               
Cow position:
               
chr4:5790857-5790676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
298-468
               

               
Cow position:
               
chr4:12713823-12713993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
96, 18
               

               
Conread position:
               
298-468
               

               
Cow position:
               
chr4:12716694-12716862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
96, 17
               

               
Conread position:
               
298-468
               

               
Cow position:
               
chr4:65825614-65825792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
50, 21
               

               
Conread position:
               
298-468
               

               
Cow position:
               
chr4:68777150-68776969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
45, 25
               

               
Conread position:
               
298-492
               

               
Cow position:
               
chr4:27657179-27656993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
51, 18
               

               
Conread position:
               
298-501
               

               
Cow position:
               
chr4:32694002-32693791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
20, 185
               

               
Conread position:
               
298-501
               

               
Cow position:
               
chr4:66168126-66168330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
23, 101
               

               
Conread position:
               
298-502
               

               
Cow position:
               
chr4:52823190-52823407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
298-503
               

               
Cow position:
               
chr4:5728044-5727849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
28, 100
               

               
Conread position:
               
298-503
               

               
Cow position:
               
chr4:44772828-44773038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
12, 26
               

               
Conread position:
               
298-503
               

               
Cow position:
               
chr4:47230789-47230993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
51, 21
               

               
Conread position:
               
298-503
               

               
Cow position:
               
chr4:47283804-47284008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
51, 21
               

               
Conread position:
               
298-503
               

               
Cow position:
               
chr4:47305288-47305082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
51, 16
               

               
Conread position:
               
298-503
               

               
Cow position:
               
chr4:61897342-61897530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
51, 16
               

               
Conread position:
               
298-503
               

               
Cow position:
               
chr4:61998987-61999197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
51, 176
               

               
Conread position:
               
298-503
               

               
Cow position:
               
chr4:62472281-62472084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
99, 7
               

               
Conread position:
               
299-447
               

               
Cow position:
               
chr4:34544516-34544361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
25, 82
               

               
Conread position:
               
299-462
               

               
Cow position:
               
chr4:7964434-7964608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
299-463
               

               
Cow position:
               
chr4:12748210-12748374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
25, 91
               

               
Conread position:
               
299-467
               

               
Cow position:
               
chr4:69290532-69290708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
50, 6
               

               
Conread position:
               
299-468
               

               
Cow position:
               
chr4:85904-85728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
299-468
               

               
Cow position:
               
chr4:66256887-66256720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
142, 19
               

               
Conread position:
               
299-483
               

               
Cow position:
               
chr4:46656344-46656146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
299-501
               

               
Cow position:
               
chr4:33096775-33096970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
29, 117
               

               
Conread position:
               
299-501
               

               
Cow position:
               
chr4:34983289-34983492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
36, 17
               

               
Conread position:
               
299-502
               

               
Cow position:
               
chr4:8352354-8352565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
47, 20
               

               
Conread position:
               
299-502
               

               
Cow position:
               
chr4:25802900-25802696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
50, 15
               

               
Conread position:
               
299-502
               

               
Cow position:
               
chr4:33838593-33838794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
50, 178
               

               
Conread position:
               
299-503
               

               
Cow position:
               
chr4:17774153-17774345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
18, 71
               

               
Conread position:
               
299-503
               

               
Cow position:
               
chr4:23450879-23451087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
23, 178
               

               
Conread position:
               
299-503
               

               
Cow position:
               
chr4:28771860-28772062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
43, 174
               

               
Conread position:
               
299-503
               

               
Cow position:
               
chr4:37915128-37915330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
50, 175
               

               
Conread position:
               
299-503
               

               
Cow position:
               
chr4:56410554-56410350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
47, 20
               

               
Conread position:
               
299-503
               

               
Cow position:
               
chr4:58018551-58018347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
50, 15
               

               
Conread position:
               
300-458
               

               
Cow position:
               
chr4:19463757-19463588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
45, 128
               

               
Conread position:
               
300-468
               

               
Cow position:
               
chr4:4318943-4319118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
300-468
               

               
Cow position:
               
chr4:37991797-37991623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
49, 14
               

               
Conread position:
               
300-468
               

               
Cow position:
               
chr4:44681053-44681218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
47, 19
               

               
Conread position:
               
300-468
               

               
Cow position:
               
chr4:45626431-45626593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
25, 46
               

               
Conread position:
               
300-468
               

               
Cow position:
               
chr4:45837419-45837594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
300-468
               

               
Cow position:
               
chr4:49212542-49212707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
47, 19
               

               
Conread position:
               
300-468
               

               
Cow position:
               
chr4:60527388-60527214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
49, 18
               

               
Conread position:
               
300-483
               

               
Cow position:
               
chr4:38822112-38822299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
91, 5
               

               
Conread position:
               
300-489
               

               
Cow position:
               
chr4:45685664-45685467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
300-499
               

               
Cow position:
               
chr4:9444472-9444678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
7, 176
               

               
Conread position:
               
300-502
               

               
Cow position:
               
chr4:19119228-19119023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
49, 173
               

               
Conread position:
               
300-503
               

               
Cow position:
               
chr4:4295786-4295591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
49, 23
               

               
Conread position:
               
300-503
               

               
Cow position:
               
chr4:21506756-21506951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
34, 17
               

               
Conread position:
               
300-503
               

               
Cow position:
               
chr4:30172017-30172223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
23, 50
               

               
Conread position:
               
301-462
               

               
Cow position:
               
chr4:63293664-63293499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
48, 15
               

               
Conread position:
               
301-463
               

               
Cow position:
               
chr4:25929419-25929255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
24, 81
               

               
Conread position:
               
301-468
               

               
Cow position:
               
chr4:28839817-28839651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
48, 21
               

               
Conread position:
               
302-463
               

               
Cow position:
               
chr4:7043612-7043781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
44, 16
               

               
Conread position:
               
302-497
               

               
Cow position:
               
chr4:8182426-8182627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
19, 178
               

               
Conread position:
               
303-468
               

               
Cow position:
               
chr4:16636868-16637041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
303-497
               

               
Cow position:
               
chr4:38944050-38944247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
12, 169
               

               
Conread position:
               
303-499
               

               
Cow position:
               
chr4:42044766-42044966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
7, 38
               

               
Conread position:
               
303-501
               

               
Cow position:
               
chr4:42423603-42423798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
29, 11
               

               
Conread position:
               
303-503
               

               
Cow position:
               
chr4:10558743-10558541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
22, 168
               

               
Conread position:
               
303-503
               

               
Cow position:
               
chr4:17186142-17186345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
47, 176
               

               
Conread position:
               
305-463
               

               
Cow position:
               
chr4:19238423-19238256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
305-463
               

               
Cow position:
               
chr4:56395722-56395551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
305-463
               

               
Cow position:
               
chr4:63261678-63261509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
18, 121
               

               
Conread position:
               
305-465
               

               
Cow position:
               
chr4:537568-537729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
43, 13
               

               
Conread position:
               
305-468
               

               
Cow position:
               
chr4:61066955-61066799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
37, 18
               

               
Conread position:
               
305-468
               

               
Cow position:
               
chr4:65463310-65463475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
44, 12
               

               
Conread position:
               
305-498
               

               
Cow position:
               
chr4:23846849-23847041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
15, 117
               

               
Conread position:
               
305-501
               

               
Cow position:
               
chr4:35982202-35982003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
40, 132
               

               
Conread position:
               
305-501
               

               
Cow position:
               
chr4:45874257-45874459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
20, 176
               

               
Conread position:
               
305-503
               

               
Cow position:
               
chr4:4084253-4084445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
47, 81
               

               
Conread position:
               
305-503
               

               
Cow position:
               
chr4:19431486-19431691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
37, 66
               

               
Conread position:
               
305-503
               

               
Cow position:
               
chr4:20327521-20327705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
37, 13
               

               
Conread position:
               
305-503
               

               
Cow position:
               
chr4:21161310-21161110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
8, 165
               

               
Conread position:
               
305-503
               

               
Cow position:
               
chr4:28701546-28701364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
305-503
               

               
Cow position:
               
chr4:30769239-30769040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
10, 151
               

               
Conread position:
               
305-503
               

               
Cow position:
               
chr4:39010260-39010054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
18, 30
               

               
Conread position:
               
305-503
               

               
Cow position:
               
chr4:51851413-51851211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
44, 13
               

               
Conread position:
               
305-503
               

               
Cow position:
               
chr4:59001934-59002134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
41, 172
               

               
Conread position:
               
306-428
               

               
Cow position:
               
chr4:22701612-22701736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
41, 12
               

               
Conread position:
               
306-458
               

               
Cow position:
               
chr4:14131626-14131471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
43, 13
               

               
Conread position:
               
306-462
               

               
Cow position:
               
chr4:22482523-22482365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
43, 93
               

               
Conread position:
               
306-464
               

               
Cow position:
               
chr4:62820853-62821018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
306-468
               

               
Cow position:
               
chr4:29291709-29291548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
43, 90
               

               
Conread position:
               
306-468
               

               
Cow position:
               
chr4:47038974-47038801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
306-468
               

               
Cow position:
               
chr4:49094101-49094256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
17, 37
               

               
Conread position:
               
306-468
               

               
Cow position:
               
chr4:68590969-68590805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
43, 12
               

               
Conread position:
               
306-479
               

               
Cow position:
               
chr4:561834-561654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
306-484
               

               
Cow position:
               
chr4:49794853-49794677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
43, 81
               

               
Conread position:
               
306-494
               

               
Cow position:
               
chr4:22215311-22215497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
43, 16
               

               
Conread position:
               
306-499
               

               
Cow position:
               
chr4:37691108-37691303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
83, 167
               

               
Conread position:
               
306-502
               

               
Cow position:
               
chr4:3299596-3299791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
43, 13
               

               
Conread position:
               
306-502
               

               
Cow position:
               
chr4:18098859-18099056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
47, 13
               

               
Conread position:
               
306-502
               

               
Cow position:
               
chr4:22009867-22010049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
306-502
               

               
Cow position:
               
chr4:22907698-22907510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
83, 12
               

               
Conread position:
               
306-502
               

               
Cow position:
               
chr4:66547560-66547762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
41, 171
               

               
Conread position:
               
306-503
               

               
Cow position:
               
chr4:3341157-3340957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
43, 20
               

               
Conread position:
               
306-503
               

               
Cow position:
               
chr4:17851056-17851248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
14, 25
               

               
Conread position:
               
306-503
               

               
Cow position:
               
chr4:38209772-38209970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
43, 170
               

               
Conread position:
               
307-450
               

               
Cow position:
               
chr4:46404709-46404856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
307-468
               

               
Cow position:
               
chr4:19200308-19200146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
96, 53
               

               
Conread position:
               
307-468
               

               
Cow position:
               
chr4:19292918-19292755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
18, 91
               

               
Conread position:
               
307-468
               

               
Cow position:
               
chr4:36841462-36841300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
35, 19
               

               
Conread position:
               
307-476
               

               
Cow position:
               
chr4:65291660-65291830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
16, 96
               

               
Conread position:
               
307-479
               

               
Cow position:
               
chr4:56308003-56307826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
89, 12
               

               
Conread position:
               
307-485
               

               
Cow position:
               
chr4:60141327-60141505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
42, 12
               

               
Conread position:
               
307-498
               

               
Cow position:
               
chr4:48409085-48409259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
42, 12
               

               
Conread position:
               
307-502
               

               
Cow position:
               
chr4:38156891-38157082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
42, 77
               

               
Conread position:
               
308-457
               

               
Cow position:
               
chr4:24371657-24371815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
10, 118
               

               
Conread position:
               
308-458
               

               
Cow position:
               
chr4:12867301-12867147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
308-462
               

               
Cow position:
               
chr4:12920535-12920372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
308-493
               

               
Cow position:
               
chr4:17790095-17790281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
51, 168
               

               
Conread position:
               
309-468
               

               
Cow position:
               
chr4:45840592-45840432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
41, 92
               

               
Conread position:
               
309-489
               

               
Cow position:
               
chr4:30974533-30974346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
38, 10
               

               
Conread position:
               
309-501
               

               
Cow position:
               
chr4:19435448-19435262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
37, 10
               

               
Conread position:
               
309-503
               

               
Cow position:
               
chr4:13693476-13693667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
36, 9
               

               
Conread position:
               
309-503
               

               
Cow position:
               
chr4:32789815-32789998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
15, 83
               

               
Conread position:
               
309-503
               

               
Cow position:
               
chr4:59277274-59277474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
43, 169
               

               
Conread position:
               
311-425
               

               
Cow position:
               
chr4:25769243-25769361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
311-463
               

               
Cow position:
               
chr4:34510027-34509879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
311-503
               

               
Cow position:
               
chr4:19090083-19089896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
156, 7
               

               
Conread position:
               
311-503
               

               
Cow position:
               
chr4:22713302-22713488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
83, 20
               

               
Conread position:
               
311-503
               

               
Cow position:
               
chr4:53134796-53134601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
7, 92
               

               
Conread position:
               
312-503
               

               
Cow position:
               
chr4:63964803-63964983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
79, 14
               

               
Conread position:
               
313-463
               

               
Cow position:
               
chr4:30250087-30250232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
313-468
               

               
Cow position:
               
chr4:30691198-30691037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
313-468
               

               
Cow position:
               
chr4:66412379-66412220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
314-463
               

               
Cow position:
               
chr4:10785945-10786101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
35, 124
               

               
Conread position:
               
314-463
               

               
Cow position:
               
chr4:12591025-12591175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
73, 14
               

               
Conread position:
               
314-467
               

               
Cow position:
               
chr4:66509821-66509672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
34, 82
               

               
Conread position:
               
314-468
               

               
Cow position:
               
chr4:31136950-31136789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
314-468
               

               
Cow position:
               
chr4:54785735-54785895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
314-468
               

               
Cow position:
               
chr4:67393290-67393125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
314-485
               

               
Cow position:
               
chr4:23271479-23271299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
314-497
               

               
Cow position:
               
chr4:51728269-51728086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
35, 87
               

               
Conread position:
               
314-498
               

               
Cow position:
               
chr4:33970715-33970887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
314-498
               

               
Cow position:
               
chr4:36929487-36929314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
176, 27
               

               
Conread position:
               
314-499
               

               
Cow position:
               
chr4:12676990-12676800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
314-499
               

               
Cow position:
               
chr4:55694365-55694175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
314-503
               

               
Cow position:
               
chr4:13344731-13344543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
35, 160
               

               
Conread position:
               
314-503
               

               
Cow position:
               
chr4:29317873-29318071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
33, 27
               

               
Conread position:
               
314-503
               

               
Cow position:
               
chr4:60719287-60719106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
35, 55
               

               
Conread position:
               
315-462
               

               
Cow position:
               
chr4:19745064-19744915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
33, 84
               

               
Conread position:
               
315-463
               

               
Cow position:
               
chr4:59785514-59785361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
316-453
               

               
Cow position:
               
chr4:49880512-49880646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
33, 67
               

               
Conread position:
               
319-436
               

               
Cow position:
               
chr4:5276268-5276392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
319-454
               

               
Cow position:
               
chr4:68358516-68358378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
31, 53
               

               
Conread position:
               
319-463
               

               
Cow position:
               
chr4:59105495-59105644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
319-463
               

               
Cow position:
               
chr4:59608006-59608146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
30, 76
               

               
Conread position:
               
319-468
               

               
Cow position:
               
chr4:8675557-8675403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
30, 147
               

               
Conread position:
               
319-468
               

               
Cow position:
               
chr4:26659490-26659333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
319-468
               

               
Cow position:
               
chr4:26959776-26959935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
319-468
               

               
Cow position:
               
chr4:60955511-60955361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
22, 99
               

               
Conread position:
               
319-468
               

               
Cow position:
               
chr4:61524620-61524466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
23, 140
               

               
Conread position:
               
319-468
               

               
Cow position:
               
chr4:62794166-62794330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
319-474
               

               
Cow position:
               
chr4:12908559-12908402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
23, 152
               

               
Conread position:
               
319-477
               

               
Cow position:
               
chr4:61969540-61969701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
73, 26
               

               
Conread position:
               
319-486
               

               
Cow position:
               
chr4:51617806-51617981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
31, 164
               

               
Conread position:
               
319-489
               

               
Cow position:
               
chr4:21531449-21531631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
319-494
               

               
Cow position:
               
chr4:19578573-19578399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
69, 44
               

               
Conread position:
               
319-498
               

               
Cow position:
               
chr4:49158602-49158784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
30, 153
               

               
Conread position:
               
319-498
               

               
Cow position:
               
chr4:59015770-59015590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
29, 40
               

               
Conread position:
               
319-499
               

               
Cow position:
               
chr4:68889389-68889552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
319-500
               

               
Cow position:
               
chr4:61391045-61391219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
30, 10
               

               
Conread position:
               
319-501
               

               
Cow position:
               
chr4:47048304-47048124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
66, 154
               

               
Conread position:
               
319-502
               

               
Cow position:
               
chr4:51083150-51083332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
30, 151
               

               
Conread position:
               
319-503
               

               
Cow position:
               
chr4:12127449-12127634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
27, 157
               

               
Conread position:
               
319-503
               

               
Cow position:
               
chr4:45076889-45077072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
29, 151
               

               
Conread position:
               
319-503
               

               
Cow position:
               
chr4:48486186-48485999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
30, 152
               

               
Conread position:
               
319-503
               

               
Cow position:
               
chr4:65173292-65173107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
28, 157
               

               
Conread position:
               
320-468
               

               
Cow position:
               
chr4:3268182-3268331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
9, 80
               

               
Conread position:
               
320-503
               

               
Cow position:
               
chr4:41907393-41907577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
29, 156
               

               
Conread position:
               
321-468
               

               
Cow position:
               
chr4:39569385-39569237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
28, 77
               

               
Conread position:
               
322-463
               

               
Cow position:
               
chr4:29384054-29384196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
25, 75
               

               
Conread position:
               
322-464
               

               
Cow position:
               
chr4:59755464-59755606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
20, 75
               

               
Conread position:
               
322-466
               

               
Cow position:
               
chr4:28854089-28854239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
322-466
               

               
Cow position:
               
chr4:51026538-51026385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
322-468
               

               
Cow position:
               
chr4:11506602-11506749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
64, 44
               

               
Conread position:
               
322-468
               

               
Cow position:
               
chr4:38940755-38940909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
25, 103
               

               
Conread position:
               
322-468
               

               
Cow position:
               
chr4:48693782-48693632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
25, 81
               

               
Conread position:
               
322-485
               

               
Cow position:
               
chr4:34699857-34700018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
27, 68
               

               
Conread position:
               
322-497
               

               
Cow position:
               
chr4:29843006-29842837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
25, 77
               

               
Conread position:
               
322-500
               

               
Cow position:
               
chr4:38935545-38935367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
71, 113
               

               
Conread position:
               
322-502
               

               
Cow position:
               
chr4:10732403-10732229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
81, 19
               

               
Conread position:
               
322-503
               

               
Cow position:
               
chr4:3421811-3421627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
27, 156
               

               
Conread position:
               
322-503
               

               
Cow position:
               
chr4:19597145-19597319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
26, 66
               

               
Conread position:
               
322-503
               

               
Cow position:
               
chr4:32602013-32601842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
27, 72
               

               
Conread position:
               
322-503
               

               
Cow position:
               
chr4:46494488-46494299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
75, 31
               

               
Conread position:
               
322-503
               

               
Cow position:
               
chr4:52831828-52832011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
27, 157
               

               
Conread position:
               
323-485
               

               
Cow position:
               
chr4:23509777-23509610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
323-493
               

               
Cow position:
               
chr4:44183934-44184109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
26, 49
               

               
Conread position:
               
323-503
               

               
Cow position:
               
chr4:214196-214021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
84, 144
               

               
Conread position:
               
323-503
               

               
Cow position:
               
chr4:40414441-40414623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
12, 148
               

               
Conread position:
               
324-462
               

               
Cow position:
               
chr4:29805184-29805334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
324-501
               

               
Cow position:
               
chr4:53208468-53208300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
22, 65
               

               
Conread position:
               
324-503
               

               
Cow position:
               
chr4:48152187-48152366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
19, 156
               

               
Conread position:
               
326-467
               

               
Cow position:
               
chr4:386211-386360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
16, 107
               

               
Conread position:
               
326-500
               

               
Cow position:
               
chr4:36070885-36070705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
23, 174
               

               
Conread position:
               
327-503
               

               
Cow position:
               
chr4:19123052-19122877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
22, 147
               

               
Conread position:
               
328-476
               

               
Cow position:
               
chr4:53380869-53380713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
328-503
               

               
Cow position:
               
chr4:34653694-34653864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
21, 83
               

               
Conread position:
               
330-479
               

               
Cow position:
               
chr4:27425884-27425735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
73, 15
               

               
Conread position:
               
331-468
               

               
Cow position:
               
chr4:34562557-34562415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
332-503
               

               
Cow position:
               
chr4:19097468-19097293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
17, 142
               

               
Conread position:
               
334-468
               

               
Cow position:
               
chr4:56513839-56513974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
13, 67
               

               
Conread position:
               
334-502
               

               
Cow position:
               
chr4:44449349-44449500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
341-502
               

               
Cow position:
               
chr4:43740696-43740540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
58, 130
               

               
Conread position:
               
342-503
               

               
Cow position:
               
chr4:26901486-26901332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
345-503
               

               
Cow position:
               
chr4:66172634-66172791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
56, 33
               

               
Conread position:
               
346-503
               

               
Cow position:
               
chr4:68387948-68387798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
347-501
               

               
Cow position:
               
chr4:43916449-43916295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
46, 128
               

               
Conread position:
               
353-485
               

               
Cow position:
               
chr4:56805325-56805192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
357-502
               

               
Cow position:
               
chr4:23600318-23600173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
36, 118
               

               
Conread position:
               
382-503
               

               
Cow position:
               
chr4:54541517-54541633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
21, 8
               
Show alignments to all cow chromosomes.