Cow genome map

Conread name: rtra25_l14r1.y1

Conread position: 248-502
Cow position: chrX:43115442-43115191 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 178
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 18, 41

Conread position: 254-503
Cow position: chrX:12095476-12095733 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 189
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 15, 225

Conread position: 262-499
Cow position: chrX:4289713-4289487 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 181
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 87, 16

Conread position: 265-503
Cow position: chrX:27705870-27705625 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 175
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 55, 103

Conread position: 269-499
Cow position: chrX:5134747-5134514 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 172
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 80, 5

Conread position: 271-463
Cow position: chrX:31489798-31489593 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 10, 49

Conread position: 274-503
Cow position: chrX:30133048-30133279 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 165
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 41, 83

Conread position: 275-499
Cow position: chrX:5118224-5118455 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 175
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 12, 5

Conread position: 276-463
Cow position: chrX:24277570-24277392 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 276-468
Cow position: chrX:17956955-17956759 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 71, 6

Conread position: 278-458
Cow position: chrX:5487677-5487861 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 142
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 20, 123

Conread position: 278-503
Cow position: chrX:27668697-27668919 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 185
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 71, 20

Conread position: 279-406
Cow position: chrX:38726204-38726073 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 279-499
Cow position: chrX:33466886-33466661 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 170
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 95, 26

Conread position: 279-499
Cow position: chrX:35285441-35285206 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 167
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 20, 41

Conread position: 280-462
Cow position: chrX:47730748-47730556 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 280-468
Cow position: chrX:14925539-14925340 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 9, 40

Conread position: 280-498
Cow position: chrX:33001160-33000949 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 155
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 69, 13

Conread position: 280-503
Cow position: chrX:31436743-31436513 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 181
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 23, 202

Conread position: 282-461
Cow position: chrX:1571331-1571514 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 6, 0

Conread position: 283-499
Cow position: chrX:35885469-35885684 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 162
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 42, 22

Conread position: 285-463
Cow position: chrX:30041842-30042018 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 112, 11

Conread position: 285-463
Cow position: chrX:40337172-40336983 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 64, 0

Conread position: 285-468
Cow position: chrX:39642368-39642554 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 148
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 13, 33

Conread position: 285-489
Cow position: chrX:42449750-42449970 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 163
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 33, 20

Conread position: 285-492
Cow position: chrX:47100332-47100556 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 158
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 285-498
Cow position: chrX:14135936-14135719 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 172
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 24, 35

Conread position: 285-499
Cow position: chrX:7722237-7722025 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 154
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 11, 122

Conread position: 285-503
Cow position: chrX:17524126-17524345 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 167
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 64, 33

Conread position: 285-503
Cow position: chrX:20339638-20339853 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 163
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 69, 29

Conread position: 285-503
Cow position: chrX:20887389-20887602 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 165
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 118, 34

Conread position: 286-463
Cow position: chrX:21288352-21288535 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 29, 65

Conread position: 286-467
Cow position: chrX:47855238-47855050 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 6, 39

Conread position: 286-468
Cow position: chrX:15546147-15545950 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 18, 157

Conread position: 286-503
Cow position: chrX:27207057-27206836 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 170
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 15, 86

Conread position: 287-468
Cow position: chrX:13924119-13923932 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 60, 32

Conread position: 287-501
Cow position: chrX:1466422-1466203 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 169
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 15, 33

Conread position: 287-503
Cow position: chrX:34412107-34411885 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 176
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 7, 19

Conread position: 288-462
Cow position: chrX:43059001-43059177 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 60, 27

Conread position: 288-463
Cow position: chrX:6389335-6389154 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 61, 15

Conread position: 288-468
Cow position: chrX:4559988-4559801 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 145
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 61, 15

Conread position: 288-503
Cow position: chrX:20957495-20957277 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 174
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 27, 8

Conread position: 289-467
Cow position: chrX:34504793-34504980 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 25, 142

Conread position: 289-502
Cow position: chrX:39353026-39352826 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 159
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 60, 16

Conread position: 289-503
Cow position: chrX:12979578-12979795 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 171
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 8, 31

Conread position: 289-503
Cow position: chrX:32208569-32208783 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 34, 80

Conread position: 289-503
Cow position: chrX:41674358-41674143 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 158
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 19, 183

Conread position: 290-503
Cow position: chrX:46072573-46072778 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 97

Conread position: 291-499
Cow position: chrX:32877124-32877332 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 152
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 97, 184

Conread position: 291-503
Cow position: chrX:2936210-2935996 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 171
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 26, 186

Conread position: 292-503
Cow position: chrX:5919740-5919531 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 169
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 99, 13

Conread position: 292-503
Cow position: chrX:16836040-16836247 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 160
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 57, 177

Conread position: 293-460
Cow position: chrX:30958980-30958806 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 89, 12

Conread position: 293-468
Cow position: chrX:19717762-19717588 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 106, 25

Conread position: 293-498
Cow position: chrX:35986068-35985862 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 164
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 97, 52

Conread position: 293-499
Cow position: chrX:46291392-46291180 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 158
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 23, 41

Conread position: 293-502
Cow position: chrX:35410000-35409792 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 161
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 54, 5

Conread position: 293-503
Cow position: chrX:26205204-26205409 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 162
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 30, 40

Conread position: 293-503
Cow position: chrX:27431675-27431879 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 168
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 97, 10

Conread position: 293-503
Cow position: chrX:32942828-32943037 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 107, 18

Conread position: 294-499
Cow position: chrX:30962622-30962834 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 158
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 31, 11

Conread position: 294-503
Cow position: chrX:1719357-1719154 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 150
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 25, 57

Conread position: 294-503
Cow position: chrX:4996844-4996624 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 160
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 8, 184

Conread position: 294-503
Cow position: chrX:16984886-16984680 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 166
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 56, 20

Conread position: 294-503
Cow position: chrX:20340411-20340604 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 55, 18

Conread position: 294-503
Cow position: chrX:34836819-34837025 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 161
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 27, 178

Conread position: 296-463
Cow position: chrX:51651-51828 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 5, 0

Conread position: 296-503
Cow position: chrX:17795231-17795020 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 161
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 28, 44

Conread position: 297-463
Cow position: chrX:296640-296464 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 55, 22

Conread position: 297-468
Cow position: chrX:26881828-26882012 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 297-499
Cow position: chrX:12993-12783 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 25, 149

Conread position: 297-503
Cow position: chrX:27270616-27270414 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 152
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 97, 21

Conread position: 297-503
Cow position: chrX:32867121-32866914 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 166
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 24, 179

Conread position: 298-411
Cow position: chrX:678032-678146 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 298-454
Cow position: chrX:43028478-43028314 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 298-462
Cow position: chrX:4268821-4268990 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 298-462
Cow position: chrX:26720442-26720608 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 101, 0

Conread position: 298-463
Cow position: chrX:37956096-37955920 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 298-468
Cow position: chrX:27446931-27446754 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 298-468
Cow position: chrX:46068515-46068691 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 298-483
Cow position: chrX:32747966-32747784 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 177, 20

Conread position: 298-483
Cow position: chrX:41027407-41027210 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 51, 25

Conread position: 298-498
Cow position: chrX:20666654-20666857 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 161
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 54, 98

Conread position: 298-503
Cow position: chrX:6274107-6274313 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 146
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 83, 63

Conread position: 298-503
Cow position: chrX:6544491-6544296 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 161
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 49, 20

Conread position: 298-503
Cow position: chrX:12437034-12437231 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 160
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 24, 85

Conread position: 298-503
Cow position: chrX:27306685-27306493 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 158
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 51, 20

Conread position: 298-503
Cow position: chrX:29467538-29467739 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 151
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 26, 47

Conread position: 298-503
Cow position: chrX:34565534-34565325 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 162
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 24, 129

Conread position: 298-503
Cow position: chrX:47345580-47345366 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 15, 186

Conread position: 299-461
Cow position: chrX:6414277-6414116 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 86, 19

Conread position: 299-462
Cow position: chrX:36961960-36961790 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 12, 54

Conread position: 299-468
Cow position: chrX:1101798-1101625 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 23, 110

Conread position: 299-468
Cow position: chrX:11529588-11529411 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 8, 0

Conread position: 299-468
Cow position: chrX:23089081-23088920 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 299-468
Cow position: chrX:31729682-31729510 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 50, 19

Conread position: 299-468
Cow position: chrX:40556215-40556391 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 12, 0

Conread position: 299-468
Cow position: chrX:41011138-41010966 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 24, 0

Conread position: 299-468
Cow position: chrX:41526288-41526460 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 137
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 7, 23

Conread position: 299-503
Cow position: chrX:2314373-2314580 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 50, 19

Conread position: 299-503
Cow position: chrX:4632606-4632819 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 159
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 24, 185

Conread position: 299-503
Cow position: chrX:28940491-28940281 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 168
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 50, 180

Conread position: 299-503
Cow position: chrX:42480069-42479872 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 159
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 47, 6

Conread position: 300-463
Cow position: chrX:16763686-16763852 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 47, 18

Conread position: 300-465
Cow position: chrX:231779-231947 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 134
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 24, 46

Conread position: 300-468
Cow position: chrX:4152797-4152963 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 136
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 13, 93

Conread position: 300-468
Cow position: chrX:9650780-9650956 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 300-468
Cow position: chrX:41199465-41199292 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 49, 18

Conread position: 300-503
Cow position: chrX:3806926-3806721 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 155
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 23, 173

Conread position: 300-503
Cow position: chrX:8869158-8869363 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 164
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 42, 178

Conread position: 300-503
Cow position: chrX:17966568-17966380 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 301-485
Cow position: chrX:23136978-23136793 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 12, 54

Conread position: 301-499
Cow position: chrX:18204224-18204424 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 68, 19

Conread position: 301-499
Cow position: chrX:35276235-35276028 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 154
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 183

Conread position: 301-502
Cow position: chrX:42894167-42893966 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 155
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 47, 169

Conread position: 301-503
Cow position: chrX:4092165-4091963 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 80, 17

Conread position: 301-503
Cow position: chrX:24633933-24633723 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 167
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 14, 45

Conread position: 301-503
Cow position: chrX:27261434-27261230 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 155
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 46, 18

Conread position: 301-503
Cow position: chrX:46588069-46587861 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 7, 81

Conread position: 302-448
Cow position: chrX:4399361-4399207 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 47, 17

Conread position: 302-503
Cow position: chrX:11656325-11656120 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 168
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 21, 177

Conread position: 302-503
Cow position: chrX:30337711-30337915 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 160
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 47, 17

Conread position: 303-463
Cow position: chrX:25207617-25207782 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 20, 146

Conread position: 303-499
Cow position: chrX:11325865-11326054 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 158
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 12, 24

Conread position: 303-499
Cow position: chrX:32910339-32910147 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 47, 16

Conread position: 303-499
Cow position: chrX:35392060-35392261 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 5, 180

Conread position: 303-503
Cow position: chrX:24332022-24331815 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 156
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 20, 139

Conread position: 303-503
Cow position: chrX:42246937-42247143 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 157
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 7, 179

Conread position: 304-452
Cow position: chrX:37177111-37176958 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 127
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 11, 51

Conread position: 304-458
Cow position: chrX:11602245-11602407 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 78, 0

Conread position: 304-463
Cow position: chrX:9451583-9451418 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 45, 135

Conread position: 304-501
Cow position: chrX:45502376-45502187 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 154
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 99, 15

Conread position: 304-503
Cow position: chrX:12290963-12290758 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 19, 171

Conread position: 304-503
Cow position: chrX:22115072-22115278 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 170
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 45, 178

Conread position: 305-393
Cow position: chrX:23786173-23786087 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 78
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 305-441
Cow position: chrX:42216393-42216536 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 44, 18

Conread position: 305-458
Cow position: chrX:37717963-37717800 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 44, 154

Conread position: 305-463
Cow position: chrX:28107087-28106920 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 305-463
Cow position: chrX:37749752-37749911 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 126
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 19, 29

Conread position: 305-468
Cow position: chrX:27175239-27175066 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 44, 13

Conread position: 305-478
Cow position: chrX:42087068-42086885 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 143
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 9, 0

Conread position: 305-484
Cow position: chrX:11589129-11589315 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 44, 15

Conread position: 305-490
Cow position: chrX:40055984-40056172 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 12, 42

Conread position: 305-501
Cow position: chrX:31983337-31983544 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 162
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 44, 175

Conread position: 305-503
Cow position: chrX:11633927-11633721 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 156
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 18, 179

Conread position: 305-503
Cow position: chrX:19394794-19394592 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 165
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 44, 13

Conread position: 305-503
Cow position: chrX:33539389-33539209 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 305-503
Cow position: chrX:39290596-39290398 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 157
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 44, 170

Conread position: 305-503
Cow position: chrX:46910052-46909854 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 13, 166

Conread position: 306-459
Cow position: chrX:17744862-17744700 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 126
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 12, 0

Conread position: 306-463
Cow position: chrX:16801026-16801190 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 17, 145

Conread position: 306-463
Cow position: chrX:29681878-29682038 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 132
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 43, 70

Conread position: 306-466
Cow position: chrX:35659034-35658866 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 89, 0

Conread position: 306-499
Cow position: chrX:11762771-11762958 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 40, 92

Conread position: 306-503
Cow position: chrX:16763007-16762810 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 43, 13

Conread position: 306-503
Cow position: chrX:20584552-20584367 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 158
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 41, 80

Conread position: 306-503
Cow position: chrX:23358877-23359072 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 160
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 43, 171

Conread position: 306-503
Cow position: chrX:34991600-34991403 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 159
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 43, 12

Conread position: 306-503
Cow position: chrX:41871298-41871106 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 155
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 15, 67

Conread position: 307-463
Cow position: chrX:24425762-24425929 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 307-463
Cow position: chrX:25441319-25441471 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 307-497
Cow position: chrX:19469279-19469461 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 148
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 18, 33

Conread position: 307-502
Cow position: chrX:20583899-20583706 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 164
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 83, 166

Conread position: 307-502
Cow position: chrX:42380875-42381072 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 163
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 45, 11

Conread position: 307-503
Cow position: chrX:10279115-10278903 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 307-503
Cow position: chrX:31480203-31480010 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 156
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 42, 18

Conread position: 308-461
Cow position: chrX:35029698-35029851 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 126
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 41, 24

Conread position: 308-478
Cow position: chrX:41238126-41238297 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 38, 10

Conread position: 308-498
Cow position: chrX:11614914-11614734 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 15, 42

Conread position: 308-502
Cow position: chrX:161638-161452 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 147
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 78, 88

Conread position: 308-503
Cow position: chrX:27145836-27145643 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 163
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 41, 14

Conread position: 309-503
Cow position: chrX:29541991-29542178 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 152
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 39, 134

Conread position: 310-499
Cow position: chrX:38094290-38094483 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 153
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 38, 175

Conread position: 311-468
Cow position: chrX:28850948-28850791 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 95, 27

Conread position: 312-457
Cow position: chrX:31279693-31279845 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 130
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 37, 0

Conread position: 312-466
Cow position: chrX:6480361-6480526 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 131
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 36, 0

Conread position: 312-503
Cow position: chrX:33654607-33654805 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 13, 166

Conread position: 313-502
Cow position: chrX:24054895-24054717 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 148
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 10, 80

Conread position: 313-502
Cow position: chrX:33854992-33855179 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 152
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 11, 137

Conread position: 313-503
Cow position: chrX:8925912-8925738 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 36, 6

Conread position: 313-503
Cow position: chrX:27511649-27511467 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 69, 31

Conread position: 314-463
Cow position: chrX:41166597-41166752 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 314-467
Cow position: chrX:4750106-4750263 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 124
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 35, 117

Conread position: 314-468
Cow position: chrX:1087916-1088075 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 35, 0

Conread position: 314-468
Cow position: chrX:15006925-15007081 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 10, 70

Conread position: 314-468
Cow position: chrX:17525645-17525799 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 127
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 314-468
Cow position: chrX:27170966-27170807 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 32, 19

Conread position: 314-468
Cow position: chrX:40035210-40035372 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 18, 28

Conread position: 314-485
Cow position: chrX:23497465-23497641 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 141
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 33, 0

Conread position: 314-493
Cow position: chrX:29050474-29050290 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 142
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 35, 0

Conread position: 314-498
Cow position: chrX:42875441-42875256 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 145
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 35, 162

Conread position: 314-499
Cow position: chrX:35269088-35268896 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 314-502
Cow position: chrX:27415355-27415540 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 11, 52

Conread position: 314-503
Cow position: chrX:2551308-2551130 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 35, 5

Conread position: 314-503
Cow position: chrX:22392754-22392945 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 9, 163

Conread position: 314-503
Cow position: chrX:31442607-31442790 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 144
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 31, 82

Conread position: 314-503
Cow position: chrX:34792091-34792272 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 153
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 92, 0

Conread position: 314-503
Cow position: chrX:37780880-37781070 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 35, 162

Conread position: 314-503
Cow position: chrX:45429799-45429983 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 147
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 35, 16

Conread position: 315-503
Cow position: chrX:4109416-4109223 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 34, 161

Conread position: 315-503
Cow position: chrX:34314253-34314063 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 153
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 9, 162

Conread position: 316-463
Cow position: chrX:19761979-19761827 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 316-503
Cow position: chrX:34532741-34532559 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 147
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 78, 33

Conread position: 319-453
Cow position: chrX:45699753-45699892 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 319-458
Cow position: chrX:918502-918638 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 114
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 66, 0

Conread position: 319-466
Cow position: chrX:10251975-10252130 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 123
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 30, 0

Conread position: 319-466
Cow position: chrX:12972905-12972753 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 125
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 30, 84

Conread position: 319-466
Cow position: chrX:31827628-31827774 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 46, 0

Conread position: 319-468
Cow position: chrX:40680842-40680682 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 319-468
Cow position: chrX:41215550-41215390 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 129
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 28, 0

Conread position: 319-477
Cow position: chrX:38587618-38587784 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 319-499
Cow position: chrX:38549674-38549490 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 13, 155

Conread position: 319-500
Cow position: chrX:23471641-23471824 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 150
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 26, 154

Conread position: 319-501
Cow position: chrX:34377166-34376983 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 30, 157

Conread position: 319-503
Cow position: chrX:9201770-9201587 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 151
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 30, 75

Conread position: 319-503
Cow position: chrX:9251936-9252124 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 152
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 30, 161

Conread position: 319-503
Cow position: chrX:13177257-13177437 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 150
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 69, 152

Conread position: 319-503
Cow position: chrX:34315754-34315558 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 150
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 28, 165

Conread position: 319-503
Cow position: chrX:38560777-38560598 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 29, 69

Conread position: 320-483
Cow position: chrX:39419500-39419659 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 11, 0

Conread position: 320-502
Cow position: chrX:41858658-41858842 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 145
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 23, 153

Conread position: 320-503
Cow position: chrX:42836407-42836220 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 29, 155

Conread position: 321-503
Cow position: chrX:4467176-4467006 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 28, 71

Conread position: 321-503
Cow position: chrX:10516479-10516292 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 155

Conread position: 322-463
Cow position: chrX:3494826-3494972 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 119
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 25, 133

Conread position: 322-466
Cow position: chrX:4486800-4486954 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 124
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 26, 0

Conread position: 322-467
Cow position: chrX:8327129-8326973 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 322-467
Cow position: chrX:26881338-26881496 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 124
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 27, 43

Conread position: 322-468
Cow position: chrX:11653991-11653838 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 322-468
Cow position: chrX:14275527-14275675 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 66, 0

Conread position: 322-468
Cow position: chrX:24749311-24749153 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 322-483
Cow position: chrX:14973533-14973695 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 23, 74

Conread position: 322-499
Cow position: chrX:1122323-1122512 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 322-500
Cow position: chrX:6640648-6640460 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 27, 105

Conread position: 322-500
Cow position: chrX:21986077-21986249 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 145
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 27, 76

Conread position: 322-503
Cow position: chrX:22075019-22074835 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 152
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 25, 42

Conread position: 322-503
Cow position: chrX:27074827-27075012 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 27, 153

Conread position: 322-503
Cow position: chrX:38642466-38642288 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 142
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 71, 31

Conread position: 322-503
Cow position: chrX:42927606-42927785 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 142
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 27, 41

Conread position: 323-503
Cow position: chrX:29601606-29601789 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 145
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 25, 155

Conread position: 324-466
Cow position: chrX:25420546-25420401 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 17, 76

Conread position: 326-503
Cow position: chrX:40685109-40685289 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 147
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 23, 148

Conread position: 327-467
Cow position: chrX:20152067-20151925 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 22, 71

Conread position: 329-503
Cow position: chrX:47061603-47061435 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 12, 69

Conread position: 330-463
Cow position: chrX:39094117-39094249 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 73, 99

Conread position: 330-468
Cow position: chrX:1360298-1360157 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 330-503
Cow position: chrX:30840757-30840579 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 19, 160

Conread position: 331-503
Cow position: chrX:30824200-30824028 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 18, 136

Conread position: 335-499
Cow position: chrX:3860438-3860597 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 56

Conread position: 345-488
Cow position: chrX:4768926-4768780 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 345-490
Cow position: chrX:35543082-35542939 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 52, 126

Conread position: 345-503
Cow position: chrX:13647586-13647746 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 41, 128

Conread position: 347-497
Cow position: chrX:41862556-41862406 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 57, 126

Conread position: 352-499
Cow position: chrX:4515879-4515734 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 123
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 41, 99

Conread position: 353-463
Cow position: chrX:40543338-40543448 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 50, 70

Conread position: 374-503
Cow position: chrX:41939984-41939862 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 386-503
Cow position: chrX:31312181-31312068 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 15, 85

Conread position: 391-503
Cow position: chrX:21573718-21573612 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 11, 53

Conread position: 395-503
Cow position: chrX:29501743-29501845 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 91
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 68, 0

Show alignments to all cow chromosomes.