Cow genome map

Conread name: rtra32_o15.y1

Conread position: 1-145
Cow position:
Alignm length: 150
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 1-170
Cow position:
Alignm length: 175
Alignm identity: 129
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 31, 127

Conread position: 1-212
Cow position:
Alignm length: 217
Alignm identity: 164
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 32, 150

Conread position: 1-216
Cow position:
Alignm length: 221
Alignm identity: 167
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 32, 150

Conread position: 1-251
Cow position:
Alignm length: 256
Alignm identity: 191
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 35, 150

Conread position: 1-286
Cow position:
Alignm length: 302
Alignm identity: 213
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 32, 90

Conread position: 1-321
Cow position:
Alignm length: 326
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-350
Cow position:
Alignm length: 360
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 154

Conread position: 1-351
Cow position:
Alignm length: 356
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-359
Cow position:
Alignm length: 364
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-384
Cow position:
Alignm length: 399
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 178

Conread position: 1-388
Cow position:
Alignm length: 401
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 12

Conread position: 1-411
Cow position:
Alignm length: 416
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 74

Conread position: 1-417
Cow position:
Alignm length: 429
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-419
Cow position:
Alignm length: 434
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 96

Conread position: 1-421
Cow position:
Alignm length: 426
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 149

Conread position: 1-422
Cow position:
Alignm length: 429
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 149

Conread position: 1-422
Cow position:
Alignm length: 428
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-422
Cow position:
Alignm length: 456
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 74

Conread position: 1-422
Cow position:
Alignm length: 422
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 1-422
Cow position:
Alignm length: 428
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 153

Conread position: 1-422
Cow position:
Alignm length: 428
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 108

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 66

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 431
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 117

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 152

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 153

Conread position: 1-423
Cow position:
Alignm length: 427
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 147

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 153

Conread position: 1-423
Cow position:
Alignm length: 424
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 12

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 153

Conread position: 1-423
Cow position:
Alignm length: 429
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 426
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 84

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 153

Conread position: 1-423
Cow position:
Alignm length: 430
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 153

Conread position: 1-423
Cow position:
Alignm length: 429
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 97

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 429
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 74

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 84

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 153

Conread position: 1-423
Cow position:
Alignm length: 430
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 13

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 95

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 95

Conread position: 1-423
Cow position:
Alignm length: 427
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 151

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 153

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 90

Conread position: 1-423
Cow position:
Alignm length: 430
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 152

Conread position: 1-423
Cow position:
Alignm length: 429
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 154

Conread position: 1-423
Cow position:
Alignm length: 430
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 432
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 113

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 145

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 427
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 149

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 429
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 141

Conread position: 1-423
Cow position:
Alignm length: 429
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 145

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 440
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 162

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 142

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 83

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 72

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 148

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 429
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 154

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 151

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 70

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 150

Conread position: 1-423
Cow position:
Alignm length: 429
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 153

Conread position: 1-425
Cow position:
Alignm length: 432
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 155

Conread position: 1-425
Cow position:
Alignm length: 431
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 2-392
Cow position:
Alignm length: 396
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 147

Conread position: 3-323
Cow position:
Alignm length: 326
Alignm identity: 225
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 30, 147

Conread position: 3-423
Cow position:
Alignm length: 426
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 148

Conread position: 5-379
Cow position:
Alignm length: 383
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 86

Conread position: 6-423
Cow position:
Alignm length: 423
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 145

Conread position: 6-423
Cow position:
Alignm length: 418
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 7-323
Cow position:
Alignm length: 323
Alignm identity: 213
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 26, 68

Conread position: 7-384
Cow position:
Alignm length: 391
Alignm identity: 243
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 23, 8

Conread position: 7-423
Cow position:
Alignm length: 419
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 68

Conread position: 7-423
Cow position:
Alignm length: 418
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 10

Conread position: 8-379
Cow position:
Alignm length: 380
Alignm identity: 253
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 25, 141

Conread position: 10-423
Cow position:
Alignm length: 416
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 42

Conread position: 12-423
Cow position:
Alignm length: 417
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 142

Conread position: 13-174
Cow position:
Alignm length: 167
Alignm identity: 127
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 20, 138

Conread position: 13-298
Cow position:
Alignm length: 291
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 138

Conread position: 13-423
Cow position:
Alignm length: 416
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 88

Conread position: 13-423
Cow position:
Alignm length: 417
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 138

Conread position: 13-423
Cow position:
Alignm length: 418
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 122

Conread position: 13-423
Cow position:
Alignm length: 416
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 140

Conread position: 14-423
Cow position:
Alignm length: 415
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 130

Conread position: 14-423
Cow position:
Alignm length: 423
Alignm identity: 274
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 19, 70

Conread position: 15-320
Cow position:
Alignm length: 308
Alignm identity: 214
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 18, 66

Conread position: 15-422
Cow position:
Alignm length: 414
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 137

Conread position: 18-423
Cow position:
Alignm length: 408
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 129

Conread position: 18-423
Cow position:
Alignm length: 411
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 133

Conread position: 28-208
Cow position:
Alignm length: 182
Alignm identity: 143
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 7, 96

Conread position: 28-249
Cow position:
Alignm length: 223
Alignm identity: 160
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 148, 118

Conread position: 28-283
Cow position:
Alignm length: 256
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 0

Conread position: 28-343
Cow position:
Alignm length: 316
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 0

Conread position: 28-420
Cow position:
Alignm length: 396
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 121

Conread position: 28-423
Cow position:
Alignm length: 396
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 0

Conread position: 36-425
Cow position:
Alignm length: 390
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 0

Conread position: 40-412
Cow position:
Alignm length: 374
Alignm identity: 260
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 360, 104

Conread position: 59-422
Cow position:
Alignm length: 364
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 69-423
Cow position:
Alignm length: 355
Alignm identity: 240
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 79, 0

Conread position: 86-423
Cow position:
Alignm length: 338
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 86-423
Cow position:
Alignm length: 338
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 98-423
Cow position:
Alignm length: 327
Alignm identity: 228
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 290, 47

Conread position: 106-352
Cow position:
Alignm length: 247
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 106-425
Cow position:
Alignm length: 320
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 114-423
Cow position:
Alignm length: 310
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 150-419
Cow position:
Alignm length: 271
Alignm identity: 184
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 24, 50

Conread position: 209-423
Cow position:
Alignm length: 227
Alignm identity: 166
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 82, 31

Conread position: 214-423
Cow position:
Alignm length: 210
Alignm identity: 159
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 27, 0

Conread position: 223-423
Cow position:
Alignm length: 201
Alignm identity: 157
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 18, 0

Conread position: 225-423
Cow position:
Alignm length: 199
Alignm identity: 148
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 16, 0

Conread position: 265-425
Cow position:
Alignm length: 161
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 12, 0

Show alignments to all cow chromosomes.