Cow genome map

Conread name: rtra32_o15.y1

Conread position: 1-175
Cow position:
Alignm length: 180
Alignm identity: 129
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 34, 83

Conread position: 1-224
Cow position:
Alignm length: 229
Alignm identity: 172
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 32, 74

Conread position: 1-240
Cow position:
Alignm length: 244
Alignm identity: 175
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 38, 149

Conread position: 1-255
Cow position:
Alignm length: 260
Alignm identity: 193
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 28, 150

Conread position: 1-273
Cow position:
Alignm length: 277
Alignm identity: 199
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 29, 81

Conread position: 1-281
Cow position:
Alignm length: 286
Alignm identity: 209
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 32, 66

Conread position: 1-320
Cow position:
Alignm length: 332
Alignm identity: 228
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 32, 107

Conread position: 1-354
Cow position:
Alignm length: 363
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 154

Conread position: 1-420
Cow position:
Alignm length: 430
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 131

Conread position: 1-422
Cow position:
Alignm length: 429
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 6

Conread position: 1-422
Cow position:
Alignm length: 430
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 152

Conread position: 1-422
Cow position:
Alignm length: 427
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 152

Conread position: 1-423
Cow position:
Alignm length: 445
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 56

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 20

Conread position: 1-423
Cow position:
Alignm length: 427
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 149

Conread position: 1-423
Cow position:
Alignm length: 429
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 56

Conread position: 1-423
Cow position:
Alignm length: 429
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 154

Conread position: 1-423
Cow position:
Alignm length: 426
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 93

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 153

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 427
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 152

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 153

Conread position: 1-423
Cow position:
Alignm length: 423
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 58

Conread position: 1-423
Cow position:
Alignm length: 435
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 152

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 430
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 151

Conread position: 1-423
Cow position:
Alignm length: 429
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 151

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-424
Cow position:
Alignm length: 424
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 0

Conread position: 1-425
Cow position:
Alignm length: 430
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 153

Conread position: 1-425
Cow position:
Alignm length: 430
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 2-423
Cow position:
Alignm length: 429
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 151

Conread position: 5-423
Cow position:
Alignm length: 422
Alignm identity: 267
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 211, 28

Conread position: 8-287
Cow position:
Alignm length: 286
Alignm identity: 191
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 25, 146

Conread position: 10-212
Cow position:
Alignm length: 209
Alignm identity: 155
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 18, 142

Conread position: 10-423
Cow position:
Alignm length: 415
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 137

Conread position: 12-274
Cow position:
Alignm length: 268
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 139

Conread position: 13-223
Cow position:
Alignm length: 216
Alignm identity: 161
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 20, 75

Conread position: 13-313
Cow position:
Alignm length: 306
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 138

Conread position: 13-423
Cow position:
Alignm length: 416
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 138

Conread position: 13-423
Cow position:
Alignm length: 416
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 138

Conread position: 13-423
Cow position:
Alignm length: 416
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 138

Conread position: 13-423
Cow position:
Alignm length: 416
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 140

Conread position: 13-423
Cow position:
Alignm length: 416
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 138

Conread position: 28-223
Cow position:
Alignm length: 196
Alignm identity: 137
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 118, 0

Conread position: 28-333
Cow position:
Alignm length: 306
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 28-343
Cow position:
Alignm length: 316
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 0

Conread position: 28-384
Cow position:
Alignm length: 361
Alignm identity: 244
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 104, 74

Conread position: 28-422
Cow position:
Alignm length: 396
Alignm identity: 266
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 313, 118

Conread position: 28-423
Cow position:
Alignm length: 396
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 0

Conread position: 54-423
Cow position:
Alignm length: 375
Alignm identity: 250
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 22, 96

Conread position: 106-423
Cow position:
Alignm length: 318
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 111-297
Cow position:
Alignm length: 187
Alignm identity: 147
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 35, 0

Conread position: 152-422
Cow position:
Alignm length: 275
Alignm identity: 196
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 119, 46

Conread position: 196-423
Cow position:
Alignm length: 228
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 249-423
Cow position:
Alignm length: 175
Alignm identity: 128
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 293-423
Cow position:
Alignm length: 131
Alignm identity: 100
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.