Cow genome map

Conread name: rtra32_o15.y1

Conread position: 1-223
Cow position:
Alignm length: 228
Alignm identity: 164
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 28, 52

Conread position: 1-227
Cow position:
Alignm length: 236
Alignm identity: 165
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 34, 136

Conread position: 1-238
Cow position:
Alignm length: 246
Alignm identity: 166
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 32, 150

Conread position: 1-285
Cow position:
Alignm length: 290
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-287
Cow position:
Alignm length: 292
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-358
Cow position:
Alignm length: 364
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 150

Conread position: 1-411
Cow position:
Alignm length: 416
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 152

Conread position: 1-414
Cow position:
Alignm length: 414
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 1-421
Cow position:
Alignm length: 426
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 149

Conread position: 1-422
Cow position:
Alignm length: 427
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 93

Conread position: 1-423
Cow position:
Alignm length: 424
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 61

Conread position: 1-423
Cow position:
Alignm length: 430
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 151

Conread position: 1-423
Cow position:
Alignm length: 429
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 429
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 430
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 102

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 153

Conread position: 1-423
Cow position:
Alignm length: 430
Alignm identity: 282
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 32, 151

Conread position: 1-423
Cow position:
Alignm length: 429
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 153

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 149

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 153

Conread position: 1-423
Cow position:
Alignm length: 429
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 151

Conread position: 1-423
Cow position:
Alignm length: 431
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 153

Conread position: 1-423
Cow position:
Alignm length: 423
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 1-423
Cow position:
Alignm length: 430
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 153

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 436
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 11

Conread position: 1-424
Cow position:
Alignm length: 424
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 0

Conread position: 1-425
Cow position:
Alignm length: 430
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 106

Conread position: 3-277
Cow position:
Alignm length: 275
Alignm identity: 199
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 8, 0

Conread position: 4-423
Cow position:
Alignm length: 425
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 64

Conread position: 5-423
Cow position:
Alignm length: 423
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 33

Conread position: 6-423
Cow position:
Alignm length: 430
Alignm identity: 270
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 27, 152

Conread position: 7-294
Cow position:
Alignm length: 289
Alignm identity: 188
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 155, 47

Conread position: 9-423
Cow position:
Alignm length: 417
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 115

Conread position: 10-423
Cow position:
Alignm length: 415
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 108

Conread position: 10-423
Cow position:
Alignm length: 416
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 137

Conread position: 13-271
Cow position:
Alignm length: 265
Alignm identity: 196
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 20, 54

Conread position: 13-359
Cow position:
Alignm length: 352
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 138

Conread position: 13-423
Cow position:
Alignm length: 417
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 93

Conread position: 13-423
Cow position:
Alignm length: 416
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 138

Conread position: 13-423
Cow position:
Alignm length: 416
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 138

Conread position: 13-423
Cow position:
Alignm length: 416
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 138

Conread position: 13-423
Cow position:
Alignm length: 416
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 54

Conread position: 13-423
Cow position:
Alignm length: 415
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 137

Conread position: 13-423
Cow position:
Alignm length: 424
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 40

Conread position: 13-423
Cow position:
Alignm length: 416
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 138

Conread position: 13-423
Cow position:
Alignm length: 416
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 138

Conread position: 13-423
Cow position:
Alignm length: 416
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 138

Conread position: 13-423
Cow position:
Alignm length: 418
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 138

Conread position: 13-423
Cow position:
Alignm length: 416
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 138

Conread position: 14-414
Cow position:
Alignm length: 403
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 89

Conread position: 20-420
Cow position:
Alignm length: 402
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 66

Conread position: 20-423
Cow position:
Alignm length: 411
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 131

Conread position: 28-137
Cow position:
Alignm length: 110
Alignm identity: 89
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 28-249
Cow position:
Alignm length: 222
Alignm identity: 171
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 118, 0

Conread position: 28-414
Cow position:
Alignm length: 388
Alignm identity: 256
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 112, 63

Conread position: 28-422
Cow position:
Alignm length: 396
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 95

Conread position: 28-423
Cow position:
Alignm length: 396
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 0

Conread position: 42-423
Cow position:
Alignm length: 382
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 0

Conread position: 44-339
Cow position:
Alignm length: 298
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 82

Conread position: 59-423
Cow position:
Alignm length: 365
Alignm identity: 241
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 79, 0

Conread position: 63-423
Cow position:
Alignm length: 361
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 0

Conread position: 82-421
Cow position:
Alignm length: 341
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 65

Conread position: 106-270
Cow position:
Alignm length: 165
Alignm identity: 132
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 40, 0

Conread position: 130-423
Cow position:
Alignm length: 294
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 208-422
Cow position:
Alignm length: 216
Alignm identity: 147
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 60, 108

Conread position: 234-423
Cow position:
Alignm length: 190
Alignm identity: 108
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 237-420
Cow position:
Alignm length: 184
Alignm identity: 125
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 249-423
Cow position:
Alignm length: 175
Alignm identity: 137
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 16, 0

Conread position: 282-423
Cow position:
Alignm length: 142
Alignm identity: 109
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.