Cow genome map

Conread name: rtra32_o15.y1

Conread position: 1-257
Cow position:
Alignm length: 259
Alignm identity: 175
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 28, 19

Conread position: 1-275
Cow position:
Alignm length: 285
Alignm identity: 194
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 32, 70

Conread position: 1-324
Cow position:
Alignm length: 330
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 139

Conread position: 1-343
Cow position:
Alignm length: 343
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 1-351
Cow position:
Alignm length: 352
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 90

Conread position: 1-378
Cow position:
Alignm length: 383
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-384
Cow position:
Alignm length: 389
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-402
Cow position:
Alignm length: 407
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 150

Conread position: 1-412
Cow position:
Alignm length: 417
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-422
Cow position:
Alignm length: 427
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 95

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 153

Conread position: 1-423
Cow position:
Alignm length: 430
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 152

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 148

Conread position: 1-423
Cow position:
Alignm length: 430
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 95

Conread position: 1-423
Cow position:
Alignm length: 430
Alignm identity: 282
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 32, 68

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 152

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 74

Conread position: 1-423
Cow position:
Alignm length: 432
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 152

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 151

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 95

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 427
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 149

Conread position: 1-424
Cow position:
Alignm length: 435
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 2-423
Cow position:
Alignm length: 427
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 149

Conread position: 3-369
Cow position:
Alignm length: 370
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 15

Conread position: 3-423
Cow position:
Alignm length: 426
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 147

Conread position: 4-423
Cow position:
Alignm length: 424
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 14

Conread position: 5-422
Cow position:
Alignm length: 420
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 142

Conread position: 5-423
Cow position:
Alignm length: 422
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 147

Conread position: 9-257
Cow position:
Alignm length: 250
Alignm identity: 187
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 20, 40

Conread position: 12-206
Cow position:
Alignm length: 202
Alignm identity: 149
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 21, 140

Conread position: 13-422
Cow position:
Alignm length: 419
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 59

Conread position: 13-423
Cow position:
Alignm length: 416
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 133

Conread position: 13-423
Cow position:
Alignm length: 417
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 62

Conread position: 13-423
Cow position:
Alignm length: 416
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 138

Conread position: 13-423
Cow position:
Alignm length: 416
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 40

Conread position: 19-423
Cow position:
Alignm length: 409
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 131

Conread position: 28-251
Cow position:
Alignm length: 224
Alignm identity: 174
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 26, 0

Conread position: 28-333
Cow position:
Alignm length: 307
Alignm identity: 195
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 134, 116

Conread position: 28-423
Cow position:
Alignm length: 396
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 0

Conread position: 28-423
Cow position:
Alignm length: 400
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 118

Conread position: 28-423
Cow position:
Alignm length: 396
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 0

Conread position: 28-423
Cow position:
Alignm length: 396
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 0

Conread position: 29-372
Cow position:
Alignm length: 347
Alignm identity: 231
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 65, 50

Conread position: 29-423
Cow position:
Alignm length: 396
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 66

Conread position: 32-382
Cow position:
Alignm length: 362
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 114

Conread position: 53-423
Cow position:
Alignm length: 371
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 0

Conread position: 199-422
Cow position:
Alignm length: 227
Alignm identity: 176
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 55, 42

Conread position: 220-423
Cow position:
Alignm length: 204
Alignm identity: 149
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 16, 0

Show alignments to all cow chromosomes.