Cow genome map

Conread name: rtra32_o15.y1

Conread position: 1-145
Cow position:
Alignm length: 150
Alignm identity: 116
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 32, 0

Conread position: 1-173
Cow position:
Alignm length: 178
Alignm identity: 134
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 32, 150

Conread position: 1-209
Cow position:
Alignm length: 215
Alignm identity: 164
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 32, 150

Conread position: 1-210
Cow position:
Alignm length: 215
Alignm identity: 152
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 27, 41

Conread position: 1-238
Cow position:
Alignm length: 243
Alignm identity: 182
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 32, 150

Conread position: 1-250
Cow position:
Alignm length: 255
Alignm identity: 176
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 49

Conread position: 1-255
Cow position:
Alignm length: 260
Alignm identity: 191
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 34, 145

Conread position: 1-333
Cow position:
Alignm length: 336
Alignm identity: 231
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 32, 88

Conread position: 1-333
Cow position:
Alignm length: 340
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-337
Cow position:
Alignm length: 339
Alignm identity: 219
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 17, 12

Conread position: 1-359
Cow position:
Alignm length: 364
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 123

Conread position: 1-384
Cow position:
Alignm length: 395
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-386
Cow position:
Alignm length: 393
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 91

Conread position: 1-392
Cow position:
Alignm length: 400
Alignm identity: 259
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 32, 96

Conread position: 1-392
Cow position:
Alignm length: 397
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 142

Conread position: 1-421
Cow position:
Alignm length: 426
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 20

Conread position: 1-422
Cow position:
Alignm length: 427
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 153

Conread position: 1-422
Cow position:
Alignm length: 428
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 150

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 113

Conread position: 1-423
Cow position:
Alignm length: 429
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 152

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 95

Conread position: 1-423
Cow position:
Alignm length: 431
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 72

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 448
Alignm identity: 297
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 153

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 153

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 152

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 284
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 32, 127

Conread position: 1-423
Cow position:
Alignm length: 431
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 59

Conread position: 1-423
Cow position:
Alignm length: 429
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 11

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 140

Conread position: 1-423
Cow position:
Alignm length: 430
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 150

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 149

Conread position: 1-424
Cow position:
Alignm length: 430
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 104

Conread position: 1-425
Cow position:
Alignm length: 431
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 154

Conread position: 1-425
Cow position:
Alignm length: 430
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 79

Conread position: 2-216
Cow position:
Alignm length: 216
Alignm identity: 163
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 27, 145

Conread position: 2-423
Cow position:
Alignm length: 427
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 145

Conread position: 3-317
Cow position:
Alignm length: 320
Alignm identity: 204
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 30, 191

Conread position: 3-422
Cow position:
Alignm length: 425
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 77

Conread position: 3-423
Cow position:
Alignm length: 426
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 151

Conread position: 4-423
Cow position:
Alignm length: 427
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 11

Conread position: 5-423
Cow position:
Alignm length: 425
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 54

Conread position: 6-423
Cow position:
Alignm length: 419
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 97

Conread position: 10-384
Cow position:
Alignm length: 377
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 13

Conread position: 10-412
Cow position:
Alignm length: 404
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 137

Conread position: 10-414
Cow position:
Alignm length: 411
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 137

Conread position: 10-423
Cow position:
Alignm length: 427
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 141

Conread position: 11-352
Cow position:
Alignm length: 345
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 136

Conread position: 12-244
Cow position:
Alignm length: 239
Alignm identity: 174
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 20, 134

Conread position: 12-425
Cow position:
Alignm length: 420
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 55

Conread position: 13-421
Cow position:
Alignm length: 414
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 40

Conread position: 13-423
Cow position:
Alignm length: 429
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 84

Conread position: 13-423
Cow position:
Alignm length: 425
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 134

Conread position: 14-339
Cow position:
Alignm length: 331
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 137

Conread position: 14-356
Cow position:
Alignm length: 345
Alignm identity: 225
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 75, 134

Conread position: 15-423
Cow position:
Alignm length: 415
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 55

Conread position: 19-422
Cow position:
Alignm length: 418
Alignm identity: 271
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 51, 131

Conread position: 25-423
Cow position:
Alignm length: 403
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 10

Conread position: 28-402
Cow position:
Alignm length: 378
Alignm identity: 234
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 66, 57

Conread position: 28-423
Cow position:
Alignm length: 396
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 0

Conread position: 29-425
Cow position:
Alignm length: 399
Alignm identity: 263
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 156, 50

Conread position: 32-353
Cow position:
Alignm length: 322
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 39-395
Cow position:
Alignm length: 370
Alignm identity: 244
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 225, 91

Conread position: 55-422
Cow position:
Alignm length: 368
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 82-423
Cow position:
Alignm length: 343
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 10

Conread position: 91-423
Cow position:
Alignm length: 333
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 197-425
Cow position:
Alignm length: 229
Alignm identity: 176
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 44, 0

Conread position: 237-423
Cow position:
Alignm length: 187
Alignm identity: 144
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.