Cow genome map
Conread name: | rtra32_o15.y1 |
Conread position: | 1-187 |
Cow position: | chr15:2012039-2012227 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 143 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 27, 154 |
Conread position: | 1-238 |
Cow position: | chr15:42320462-42320225 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 183 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 32, 140 |
Conread position: | 1-256 |
Cow position: | chr15:7787741-7787488 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 180 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 32, 18 |
Conread position: | 1-256 |
Cow position: | chr15:51216553-51216805 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 196 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 32, 150 |
Conread position: | 1-278 |
Cow position: | chr15:3842465-3842181 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 205 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 32, 147 |
Conread position: | 1-282 |
Cow position: | chr15:7260593-7260866 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 213 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 17, 151 |
Conread position: | 1-342 |
Cow position: | chr15:12421201-12420860 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 67 |
Conread position: | 1-379 |
Cow position: | chr15:51714922-51715300 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 150 |
Conread position: | 1-412 |
Cow position: | chr15:44069889-44070299 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 148 |
Conread position: | 1-415 |
Cow position: | chr15:17292403-17292836 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 155 |
Conread position: | 1-419 |
Cow position: | chr15:32673583-32673182 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 94 |
Conread position: | 1-421 |
Cow position: | chr15:2647697-2647275 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 151 |
Conread position: | 1-421 |
Cow position: | chr15:17080243-17079826 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 150 |
Conread position: | 1-421 |
Cow position: | chr15:35735543-35735958 (view UCSC Genome Browser custom track) |
Alignm length: | 424 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 319, 90 |
Conread position: | 1-421 |
Cow position: | chr15:42936679-42937092 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 74 |
Conread position: | 1-423 |
Cow position: | chr15:315895-315474 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 150 |
Conread position: | 1-423 |
Cow position: | chr15:1237653-1238063 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 46 |
Conread position: | 1-423 |
Cow position: | chr15:1519191-1518772 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 150 |
Conread position: | 1-423 |
Cow position: | chr15:1772457-1772879 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 150 |
Conread position: | 1-423 |
Cow position: | chr15:1882547-1882125 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 150 |
Conread position: | 1-423 |
Cow position: | chr15:2076613-2077031 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 95 |
Conread position: | 1-423 |
Cow position: | chr15:3009892-3009472 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 96 |
Conread position: | 1-423 |
Cow position: | chr15:4196421-4196843 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 150 |
Conread position: | 1-423 |
Cow position: | chr15:4922115-4922532 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 315 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 150 |
Conread position: | 1-423 |
Cow position: | chr15:4961611-4962019 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 76 |
Conread position: | 1-423 |
Cow position: | chr15:6155988-6155562 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 325 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 157 |
Conread position: | 1-423 |
Cow position: | chr15:6471959-6471538 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 68 |
Conread position: | 1-423 |
Cow position: | chr15:7544846-7545259 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 129 |
Conread position: | 1-423 |
Cow position: | chr15:7837209-7837630 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 153 |
Conread position: | 1-423 |
Cow position: | chr15:7934295-7934712 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 91 |
Conread position: | 1-423 |
Cow position: | chr15:15347154-15346731 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 90 |
Conread position: | 1-423 |
Cow position: | chr15:18268028-18267606 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 150 |
Conread position: | 1-423 |
Cow position: | chr15:18576679-18577098 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 108 |
Conread position: | 1-423 |
Cow position: | chr15:19738088-19737669 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 153 |
Conread position: | 1-423 |
Cow position: | chr15:21665781-21665364 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 153 |
Conread position: | 1-423 |
Cow position: | chr15:24295059-24295479 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 150 |
Conread position: | 1-423 |
Cow position: | chr15:28490182-28489767 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 13 |
Conread position: | 1-423 |
Cow position: | chr15:31358851-31359264 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 150 |
Conread position: | 1-423 |
Cow position: | chr15:32494422-32494003 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 152 |
Conread position: | 1-423 |
Cow position: | chr15:36626330-36625888 (view UCSC Genome Browser custom track) |
Alignm length: | 452 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 161 |
Conread position: | 1-424 |
Cow position: | chr15:328392-328794 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 281 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 32, 147 |
Conread position: | 1-425 |
Cow position: | chr15:44828759-44829183 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 150 |
Conread position: | 2-423 |
Cow position: | chr15:444567-444986 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 149 |
Conread position: | 3-249 |
Cow position: | chr15:9912603-9912844 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 183 |
Alignm E-value: | 9e-35 |
Alignm gaps (pig, cow): | 30, 93 |
Conread position: | 3-343 |
Cow position: | chr15:35753630-35753286 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 148 |
Conread position: | 3-423 |
Cow position: | chr15:19817940-19818347 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 257, 32 |
Conread position: | 4-423 |
Cow position: | chr15:6078725-6079133 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 63 |
Conread position: | 4-423 |
Cow position: | chr15:35647699-35647286 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 142 |
Conread position: | 5-217 |
Cow position: | chr15:17218435-17218223 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 150 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 28, 76 |
Conread position: | 5-423 |
Cow position: | chr15:8099457-8099860 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 315 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 92 |
Conread position: | 7-423 |
Cow position: | chr15:6553843-6553440 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 8 |
Conread position: | 8-423 |
Cow position: | chr15:7549375-7549780 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 74 |
Conread position: | 10-206 |
Cow position: | chr15:7234277-7234468 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 144 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 19, 61 |
Conread position: | 10-422 |
Cow position: | chr15:369183-368792 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 137 |
Conread position: | 10-423 |
Cow position: | chr15:18332850-18332445 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 76 |
Conread position: | 10-423 |
Cow position: | chr15:37392468-37392876 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 137 |
Conread position: | 11-423 |
Cow position: | chr15:3261355-3260937 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 136 |
Conread position: | 12-186 |
Cow position: | chr15:53339000-53339168 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 128 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 12-296 |
Cow position: | chr15:4765181-4765465 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 209 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 21, 139 |
Conread position: | 12-378 |
Cow position: | chr15:8750402-8750751 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 62 |
Conread position: | 12-419 |
Cow position: | chr15:1764070-1764468 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 51 |
Conread position: | 12-419 |
Cow position: | chr15:4651344-4651741 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 31 |
Conread position: | 13-210 |
Cow position: | chr15:29009810-29010008 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 152 |
Alignm E-value: | 7e-33 |
Alignm gaps (pig, cow): | 20, 138 |
Conread position: | 13-352 |
Cow position: | chr15:5980333-5980675 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 139 |
Conread position: | 13-423 |
Cow position: | chr15:1834491-1834089 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 121 |
Conread position: | 13-423 |
Cow position: | chr15:4142847-4142437 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 138 |
Conread position: | 14-423 |
Cow position: | chr15:524883-524476 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 140 |
Conread position: | 14-423 |
Cow position: | chr15:10888593-10888999 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 59 |
Conread position: | 14-423 |
Cow position: | chr15:36970896-36971298 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 91 |
Conread position: | 15-423 |
Cow position: | chr15:7894254-7893852 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 85 |
Conread position: | 23-332 |
Cow position: | chr15:2591778-2591473 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 181 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 15, 125 |
Conread position: | 27-281 |
Cow position: | chr15:24794345-24794592 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 190 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 61, 120 |
Conread position: | 28-199 |
Cow position: | chr15:41366168-41366332 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 125 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 28-216 |
Cow position: | chr15:36077238-36077422 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 140 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 118, 0 |
Conread position: | 28-324 |
Cow position: | chr15:4385264-4385551 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 217 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 0 |
Conread position: | 28-422 |
Cow position: | chr15:4812599-4812980 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 364, 118 |
Conread position: | 28-422 |
Cow position: | chr15:50123951-50123562 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 114, 0 |
Conread position: | 28-423 |
Cow position: | chr15:14582354-14581977 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 32-422 |
Cow position: | chr15:32720742-32720360 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 116 |
Conread position: | 32-423 |
Cow position: | chr15:3888872-3889260 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 192, 114 |
Conread position: | 37-423 |
Cow position: | chr15:32711101-32711474 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 112 |
Conread position: | 44-423 |
Cow position: | chr15:56500-56861 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 265 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 49, 57 |
Conread position: | 57-423 |
Cow position: | chr15:789552-789191 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 89, 0 |
Conread position: | 60-277 |
Cow position: | chr15:690800-691009 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 162 |
Alignm E-value: | 9e-35 |
Alignm gaps (pig, cow): | 86, 0 |
Conread position: | 64-423 |
Cow position: | chr15:38980697-38981051 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 0 |
Conread position: | 75-423 |
Cow position: | chr15:32693617-32693951 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 184, 63 |
Conread position: | 111-418 |
Cow position: | chr15:32203738-32204027 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 0 |
Conread position: | 115-420 |
Cow position: | chr15:4678384-4678685 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 225 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 244, 34 |
Conread position: | 237-423 |
Cow position: | chr15:6592429-6592236 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 142 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 23, 29 |
Show alignments to all cow chromosomes.