Cow genome map

Conread name: rtra32_o15.y1

Conread position: 1-187
Cow position:
Alignm length: 192
Alignm identity: 143
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 27, 154

Conread position: 1-238
Cow position:
Alignm length: 243
Alignm identity: 183
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 32, 140

Conread position: 1-256
Cow position:
Alignm length: 262
Alignm identity: 180
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 32, 18

Conread position: 1-256
Cow position:
Alignm length: 261
Alignm identity: 196
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 32, 150

Conread position: 1-278
Cow position:
Alignm length: 291
Alignm identity: 205
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 32, 147

Conread position: 1-282
Cow position:
Alignm length: 288
Alignm identity: 213
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 17, 151

Conread position: 1-342
Cow position:
Alignm length: 349
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 67

Conread position: 1-379
Cow position:
Alignm length: 385
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-412
Cow position:
Alignm length: 419
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 148

Conread position: 1-415
Cow position:
Alignm length: 440
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 155

Conread position: 1-419
Cow position:
Alignm length: 423
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 94

Conread position: 1-421
Cow position:
Alignm length: 430
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 151

Conread position: 1-421
Cow position:
Alignm length: 426
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-421
Cow position:
Alignm length: 424
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 319, 90

Conread position: 1-421
Cow position:
Alignm length: 426
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 74

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 150

Conread position: 1-423
Cow position:
Alignm length: 425
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 46

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 150

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 150

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 150

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 95

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 96

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 150

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 429
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 76

Conread position: 1-423
Cow position:
Alignm length: 432
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 157

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 68

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 129

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 153

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 91

Conread position: 1-423
Cow position:
Alignm length: 430
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 90

Conread position: 1-423
Cow position:
Alignm length: 430
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 429
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 108

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 153

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 153

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 429
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 13

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 152

Conread position: 1-423
Cow position:
Alignm length: 452
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 161

Conread position: 1-424
Cow position:
Alignm length: 431
Alignm identity: 281
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 32, 147

Conread position: 1-425
Cow position:
Alignm length: 430
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 150

Conread position: 2-423
Cow position:
Alignm length: 427
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 149

Conread position: 3-249
Cow position:
Alignm length: 252
Alignm identity: 183
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 30, 93

Conread position: 3-343
Cow position:
Alignm length: 350
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 148

Conread position: 3-423
Cow position:
Alignm length: 423
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 32

Conread position: 4-423
Cow position:
Alignm length: 425
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 63

Conread position: 4-423
Cow position:
Alignm length: 427
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 142

Conread position: 5-217
Cow position:
Alignm length: 218
Alignm identity: 150
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 28, 76

Conread position: 5-423
Cow position:
Alignm length: 426
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 92

Conread position: 7-423
Cow position:
Alignm length: 418
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 8

Conread position: 8-423
Cow position:
Alignm length: 419
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 74

Conread position: 10-206
Cow position:
Alignm length: 198
Alignm identity: 144
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 19, 61

Conread position: 10-422
Cow position:
Alignm length: 414
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 137

Conread position: 10-423
Cow position:
Alignm length: 416
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 76

Conread position: 10-423
Cow position:
Alignm length: 416
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 137

Conread position: 11-423
Cow position:
Alignm length: 425
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 136

Conread position: 12-186
Cow position:
Alignm length: 175
Alignm identity: 128
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 23, 0

Conread position: 12-296
Cow position:
Alignm length: 290
Alignm identity: 209
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 21, 139

Conread position: 12-378
Cow position:
Alignm length: 373
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 62

Conread position: 12-419
Cow position:
Alignm length: 409
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 51

Conread position: 12-419
Cow position:
Alignm length: 409
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 31

Conread position: 13-210
Cow position:
Alignm length: 203
Alignm identity: 152
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 20, 138

Conread position: 13-352
Cow position:
Alignm length: 348
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 139

Conread position: 13-423
Cow position:
Alignm length: 417
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 121

Conread position: 13-423
Cow position:
Alignm length: 416
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 138

Conread position: 14-423
Cow position:
Alignm length: 415
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 140

Conread position: 14-423
Cow position:
Alignm length: 416
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 59

Conread position: 14-423
Cow position:
Alignm length: 415
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 91

Conread position: 15-423
Cow position:
Alignm length: 417
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 85

Conread position: 23-332
Cow position:
Alignm length: 312
Alignm identity: 181
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 15, 125

Conread position: 27-281
Cow position:
Alignm length: 257
Alignm identity: 190
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 61, 120

Conread position: 28-199
Cow position:
Alignm length: 172
Alignm identity: 125
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 28-216
Cow position:
Alignm length: 189
Alignm identity: 140
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 118, 0

Conread position: 28-324
Cow position:
Alignm length: 297
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 0

Conread position: 28-422
Cow position:
Alignm length: 396
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 364, 118

Conread position: 28-422
Cow position:
Alignm length: 395
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 0

Conread position: 28-423
Cow position:
Alignm length: 396
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 32-422
Cow position:
Alignm length: 395
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 116

Conread position: 32-423
Cow position:
Alignm length: 397
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 114

Conread position: 37-423
Cow position:
Alignm length: 389
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 112

Conread position: 44-423
Cow position:
Alignm length: 381
Alignm identity: 265
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 49, 57

Conread position: 57-423
Cow position:
Alignm length: 367
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 0

Conread position: 60-277
Cow position:
Alignm length: 218
Alignm identity: 162
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 86, 0

Conread position: 64-423
Cow position:
Alignm length: 360
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 0

Conread position: 75-423
Cow position:
Alignm length: 350
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 63

Conread position: 111-418
Cow position:
Alignm length: 308
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 115-420
Cow position:
Alignm length: 309
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 34

Conread position: 237-423
Cow position:
Alignm length: 196
Alignm identity: 142
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 23, 29

Show alignments to all cow chromosomes.