Cow genome map
| Conread name: | rtra32_o15.y1 |
| Conread position: | 1-251 |
| Cow position: | chr18:54003924-54004163 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 31, 80 |
| Conread position: | 1-341 |
| Cow position: | chr18:8169105-8169445 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 150 |
| Conread position: | 1-365 |
| Cow position: | chr18:29765375-29765740 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 151 |
| Conread position: | 1-387 |
| Cow position: | chr18:51481238-51481623 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 118 |
| Conread position: | 1-417 |
| Cow position: | chr18:27837913-27837495 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 150 |
| Conread position: | 1-419 |
| Cow position: | chr18:52651323-52651733 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 7 |
| Conread position: | 1-421 |
| Cow position: | chr18:32652606-32653034 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 34 |
| Conread position: | 1-422 |
| Cow position: | chr18:54171134-54170713 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 153 |
| Conread position: | 1-423 |
| Cow position: | chr18:14130794-14131212 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 148 |
| Conread position: | 1-423 |
| Cow position: | chr18:14416379-14416804 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 155 |
| Conread position: | 1-423 |
| Cow position: | chr18:16088549-16088966 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 150 |
| Conread position: | 1-423 |
| Cow position: | chr18:16176215-16175795 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 155 |
| Conread position: | 1-423 |
| Cow position: | chr18:19352779-19353190 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 18 |
| Conread position: | 1-423 |
| Cow position: | chr18:23798050-23798468 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 24 |
| Conread position: | 1-423 |
| Cow position: | chr18:24040335-24039906 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 157 |
| Conread position: | 1-423 |
| Cow position: | chr18:25351151-25351575 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 153 |
| Conread position: | 1-423 |
| Cow position: | chr18:33336266-33336693 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 152 |
| Conread position: | 1-423 |
| Cow position: | chr18:33953178-33952761 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 108 |
| Conread position: | 1-423 |
| Cow position: | chr18:36508736-36509158 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 153 |
| Conread position: | 1-423 |
| Cow position: | chr18:40478786-40479208 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 153 |
| Conread position: | 1-423 |
| Cow position: | chr18:41840421-41839989 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 153 |
| Conread position: | 1-423 |
| Cow position: | chr18:51462682-51462264 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 56 |
| Conread position: | 1-423 |
| Cow position: | chr18:51660744-51661161 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 145 |
| Conread position: | 1-423 |
| Cow position: | chr18:55088527-55088101 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 153 |
| Conread position: | 3-362 |
| Cow position: | chr18:54270913-54271263 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 147 |
| Conread position: | 3-423 |
| Cow position: | chr18:27987469-27987888 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 148 |
| Conread position: | 5-423 |
| Cow position: | chr18:33269233-33269645 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 69 |
| Conread position: | 13-384 |
| Cow position: | chr18:22602896-22603265 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 128 |
| Conread position: | 13-423 |
| Cow position: | chr18:11274697-11274287 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 138 |
| Conread position: | 19-420 |
| Cow position: | chr18:33750437-33750829 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 49 |
| Conread position: | 28-423 |
| Cow position: | chr18:16721891-16721507 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 258 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 169, 57 |
| Conread position: | 28-423 |
| Cow position: | chr18:51342115-51342505 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 29-354 |
| Cow position: | chr18:15855828-15856145 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 63, 55 |
Show alignments to all cow chromosomes.