Cow genome map
| Conread name: | rtra32_o15.y1 |
| Conread position: | 1-347 |
| Cow position: | chr19:3138344-3138689 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 146 |
| Conread position: | 1-349 |
| Cow position: | chr19:28593665-28594008 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 150 |
| Conread position: | 1-364 |
| Cow position: | chr19:39669101-39668747 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 67 |
| Conread position: | 1-408 |
| Cow position: | chr19:162692-162301 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 70 |
| Conread position: | 1-418 |
| Cow position: | chr19:40887327-40886926 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 255, 13 |
| Conread position: | 1-419 |
| Cow position: | chr19:4386019-4386446 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 159 |
| Conread position: | 1-419 |
| Cow position: | chr19:32203562-32203968 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 283 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 80, 29 |
| Conread position: | 1-423 |
| Cow position: | chr19:75844-75427 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 100 |
| Conread position: | 1-423 |
| Cow position: | chr19:172619-173033 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 61 |
| Conread position: | 1-423 |
| Cow position: | chr19:341627-342042 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 69 |
| Conread position: | 1-423 |
| Cow position: | chr19:439033-438612 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 95 |
| Conread position: | 1-423 |
| Cow position: | chr19:772997-773418 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 152 |
| Conread position: | 1-423 |
| Cow position: | chr19:893200-892780 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 154 |
| Conread position: | 1-423 |
| Cow position: | chr19:2273978-2273558 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 153 |
| Conread position: | 1-423 |
| Cow position: | chr19:5729237-5729659 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 150 |
| Conread position: | 1-423 |
| Cow position: | chr19:7342472-7342890 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 22 |
| Conread position: | 1-423 |
| Cow position: | chr19:27052107-27051681 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 148 |
| Conread position: | 1-423 |
| Cow position: | chr19:28581253-28580835 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 152 |
| Conread position: | 1-423 |
| Cow position: | chr19:32182673-32182255 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 300 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 35, 93 |
| Conread position: | 1-423 |
| Cow position: | chr19:33942018-33942428 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 1-423 |
| Cow position: | chr19:39185138-39184715 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 153 |
| Conread position: | 1-423 |
| Cow position: | chr19:39390916-39391334 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 150 |
| Conread position: | 1-425 |
| Cow position: | chr19:40852030-40851614 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 148 |
| Conread position: | 2-423 |
| Cow position: | chr19:33873835-33874249 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 140 |
| Conread position: | 13-171 |
| Cow position: | chr19:5208585-5208745 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 22, 138 |
| Conread position: | 13-195 |
| Cow position: | chr19:38308-38493 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 20, 138 |
| Conread position: | 13-423 |
| Cow position: | chr19:32211660-32211252 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 137 |
| Conread position: | 14-423 |
| Cow position: | chr19:20105125-20105533 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 137 |
| Conread position: | 15-368 |
| Cow position: | chr19:10956800-10956460 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 228 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 28-423 |
| Cow position: | chr19:168167-167777 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 28-423 |
| Cow position: | chr19:204396-204783 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 28-423 |
| Cow position: | chr19:52151397-52151010 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 32-422 |
| Cow position: | chr19:35980587-35980964 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 32-423 |
| Cow position: | chr19:5901057-5900679 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 82-423 |
| Cow position: | chr19:12773607-12773941 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 151-421 |
| Cow position: | chr19:28406149-28405882 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 209 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 183, 33 |
| Conread position: | 286-423 |
| Cow position: | chr19:38982-39119 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 292-422 |
| Cow position: | chr19:40816875-40816745 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.