Cow genome map

Conread name: rtra32_o15.y1

Conread position: 1-227
Cow position:
Alignm length: 232
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 101

Conread position: 1-234
Cow position:
Alignm length: 239
Alignm identity: 164
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 31, 89

Conread position: 1-242
Cow position:
Alignm length: 251
Alignm identity: 183
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 32, 152

Conread position: 1-271
Cow position:
Alignm length: 276
Alignm identity: 164
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 32, 100

Conread position: 1-303
Cow position:
Alignm length: 308
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 150

Conread position: 1-327
Cow position:
Alignm length: 332
Alignm identity: 234
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 32, 63

Conread position: 1-342
Cow position:
Alignm length: 347
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 68

Conread position: 1-357
Cow position:
Alignm length: 362
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 150

Conread position: 1-364
Cow position:
Alignm length: 376
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 150

Conread position: 1-421
Cow position:
Alignm length: 426
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-422
Cow position:
Alignm length: 429
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 150

Conread position: 1-422
Cow position:
Alignm length: 427
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-422
Cow position:
Alignm length: 431
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 90

Conread position: 1-422
Cow position:
Alignm length: 424
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 34

Conread position: 1-422
Cow position:
Alignm length: 423
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 330, 34

Conread position: 1-423
Cow position:
Alignm length: 431
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 429
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 95

Conread position: 1-423
Cow position:
Alignm length: 432
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 154

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 150

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 150

Conread position: 1-423
Cow position:
Alignm length: 444
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 27

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 429
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 429
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 153

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 153

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 152

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 429
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 49

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 138

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 95

Conread position: 1-423
Cow position:
Alignm length: 429
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 151

Conread position: 1-423
Cow position:
Alignm length: 427
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 149

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 153

Conread position: 1-423
Cow position:
Alignm length: 429
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 150

Conread position: 2-298
Cow position:
Alignm length: 303
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 149

Conread position: 3-343
Cow position:
Alignm length: 347
Alignm identity: 237
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 30, 16

Conread position: 3-419
Cow position:
Alignm length: 426
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 150

Conread position: 3-423
Cow position:
Alignm length: 426
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 148

Conread position: 3-423
Cow position:
Alignm length: 430
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 66

Conread position: 3-423
Cow position:
Alignm length: 428
Alignm identity: 280
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 29, 147

Conread position: 5-423
Cow position:
Alignm length: 424
Alignm identity: 275
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 28, 73

Conread position: 5-423
Cow position:
Alignm length: 420
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 93

Conread position: 6-422
Cow position:
Alignm length: 429
Alignm identity: 286
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 23, 11

Conread position: 9-201
Cow position:
Alignm length: 198
Alignm identity: 144
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 24, 82

Conread position: 9-384
Cow position:
Alignm length: 382
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 133

Conread position: 10-359
Cow position:
Alignm length: 352
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 138

Conread position: 10-419
Cow position:
Alignm length: 411
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 134

Conread position: 10-423
Cow position:
Alignm length: 425
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 149

Conread position: 10-423
Cow position:
Alignm length: 421
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 74

Conread position: 11-421
Cow position:
Alignm length: 413
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 136

Conread position: 12-338
Cow position:
Alignm length: 331
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 89

Conread position: 12-420
Cow position:
Alignm length: 414
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 139

Conread position: 13-285
Cow position:
Alignm length: 279
Alignm identity: 197
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 20, 138

Conread position: 13-332
Cow position:
Alignm length: 324
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 137

Conread position: 13-423
Cow position:
Alignm length: 416
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 90

Conread position: 13-423
Cow position:
Alignm length: 416
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 89

Conread position: 13-423
Cow position:
Alignm length: 416
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 138

Conread position: 13-423
Cow position:
Alignm length: 416
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 138

Conread position: 13-423
Cow position:
Alignm length: 418
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 138

Conread position: 13-423
Cow position:
Alignm length: 416
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 140

Conread position: 14-423
Cow position:
Alignm length: 416
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 34

Conread position: 18-378
Cow position:
Alignm length: 366
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 133

Conread position: 20-423
Cow position:
Alignm length: 404
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 28-193
Cow position:
Alignm length: 166
Alignm identity: 125
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 118, 0

Conread position: 28-257
Cow position:
Alignm length: 230
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 0

Conread position: 28-413
Cow position:
Alignm length: 394
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 79

Conread position: 28-414
Cow position:
Alignm length: 387
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 0

Conread position: 28-423
Cow position:
Alignm length: 397
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 373, 118

Conread position: 28-423
Cow position:
Alignm length: 396
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 28-423
Cow position:
Alignm length: 397
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 30

Conread position: 28-423
Cow position:
Alignm length: 396
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 0

Conread position: 28-423
Cow position:
Alignm length: 396
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 29-283
Cow position:
Alignm length: 256
Alignm identity: 170
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 135, 63

Conread position: 33-423
Cow position:
Alignm length: 391
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 0

Conread position: 95-272
Cow position:
Alignm length: 178
Alignm identity: 134
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 134-422
Cow position:
Alignm length: 290
Alignm identity: 210
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 268, 14

Conread position: 157-423
Cow position:
Alignm length: 268
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 44

Conread position: 190-425
Cow position:
Alignm length: 236
Alignm identity: 163
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 22, 0

Conread position: 196-423
Cow position:
Alignm length: 228
Alignm identity: 169
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 45, 0

Conread position: 236-414
Cow position:
Alignm length: 179
Alignm identity: 133
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 8, 0

Conread position: 248-423
Cow position:
Alignm length: 176
Alignm identity: 128
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 54, 0

Conread position: 266-423
Cow position:
Alignm length: 158
Alignm identity: 124
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.