Cow genome map
| Conread name: | rtra32_o15.y1 |
| Conread position: | 1-343 |
| Cow position: | chr20:8003861-8003522 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 68 |
| Conread position: | 1-352 |
| Cow position: | chr20:2790539-2790196 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 32, 111 |
| Conread position: | 1-354 |
| Cow position: | chr20:25850627-25850279 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 150 |
| Conread position: | 1-384 |
| Cow position: | chr20:12438396-12438016 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 150 |
| Conread position: | 1-389 |
| Cow position: | chr20:42905579-42905951 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 1-396 |
| Cow position: | chr20:28161135-28161528 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 74 |
| Conread position: | 1-408 |
| Cow position: | chr20:25961461-25961868 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 150 |
| Conread position: | 1-422 |
| Cow position: | chr20:8992857-8992439 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 17 |
| Conread position: | 1-423 |
| Cow position: | chr20:5535302-5535717 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 74 |
| Conread position: | 1-423 |
| Cow position: | chr20:13679678-13679264 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 151 |
| Conread position: | 1-423 |
| Cow position: | chr20:15097512-15097093 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 150 |
| Conread position: | 1-423 |
| Cow position: | chr20:15292372-15292787 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 49 |
| Conread position: | 1-423 |
| Cow position: | chr20:18314944-18314557 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 97 |
| Conread position: | 1-423 |
| Cow position: | chr20:21914692-21915102 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 150 |
| Conread position: | 1-423 |
| Cow position: | chr20:23469301-23468880 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 150 |
| Conread position: | 1-423 |
| Cow position: | chr20:28565232-28564807 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 156 |
| Conread position: | 1-423 |
| Cow position: | chr20:29948864-29949286 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 76 |
| Conread position: | 1-423 |
| Cow position: | chr20:35124860-35125278 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 150 |
| Conread position: | 1-423 |
| Cow position: | chr20:38351036-38351456 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 13 |
| Conread position: | 3-377 |
| Cow position: | chr20:16179449-16179077 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 148 |
| Conread position: | 3-423 |
| Cow position: | chr20:18324808-18324401 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 278 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 30, 148 |
| Conread position: | 4-237 |
| Cow position: | chr20:7115119-7114885 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 177 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 29, 145 |
| Conread position: | 4-239 |
| Cow position: | chr20:3271070-3271302 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 29, 140 |
| Conread position: | 5-423 |
| Cow position: | chr20:10840341-10839929 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 98 |
| Conread position: | 6-422 |
| Cow position: | chr20:8215888-8216298 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 145 |
| Conread position: | 6-423 |
| Cow position: | chr20:23799255-23799666 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 129 |
| Conread position: | 8-310 |
| Cow position: | chr20:22716955-22716659 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 221 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 21, 140 |
| Conread position: | 12-423 |
| Cow position: | chr20:13763280-13763691 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 138 |
| Conread position: | 12-425 |
| Cow position: | chr20:30684696-30685105 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 139 |
| Conread position: | 13-423 |
| Cow position: | chr20:823137-823542 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 133 |
| Conread position: | 32-383 |
| Cow position: | chr20:21393995-21394337 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 35-238 |
| Cow position: | chr20:38624411-38624605 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 82-423 |
| Cow position: | chr20:12568969-12569305 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 86-341 |
| Cow position: | chr20:15065722-15065968 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 186 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 106-422 |
| Cow position: | chr20:8974342-8974037 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 0 |
Show alignments to all cow chromosomes.