Cow genome map

Conread name: rtra32_o15.y1

Conread position: 1-172
Cow position:
Alignm length: 177
Alignm identity: 134
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 32, 150

Conread position: 1-192
Cow position:
Alignm length: 199
Alignm identity: 150
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 32, 62

Conread position: 1-222
Cow position:
Alignm length: 227
Alignm identity: 166
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 32, 150

Conread position: 1-245
Cow position:
Alignm length: 251
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 151

Conread position: 1-259
Cow position:
Alignm length: 271
Alignm identity: 186
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 32, 130

Conread position: 1-280
Cow position:
Alignm length: 285
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 106

Conread position: 1-283
Cow position:
Alignm length: 288
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 148

Conread position: 1-333
Cow position:
Alignm length: 338
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-357
Cow position:
Alignm length: 362
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 150

Conread position: 1-367
Cow position:
Alignm length: 372
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-412
Cow position:
Alignm length: 418
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 142

Conread position: 1-417
Cow position:
Alignm length: 418
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 131

Conread position: 1-422
Cow position:
Alignm length: 435
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 158

Conread position: 1-422
Cow position:
Alignm length: 427
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 70

Conread position: 1-423
Cow position:
Alignm length: 426
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 151

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 144

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 100

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 70

Conread position: 1-423
Cow position:
Alignm length: 437
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 138

Conread position: 1-423
Cow position:
Alignm length: 427
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 149

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 72

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 424
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 146

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 66

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 68

Conread position: 4-423
Cow position:
Alignm length: 425
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 51

Conread position: 5-249
Cow position:
Alignm length: 246
Alignm identity: 177
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 24, 141

Conread position: 5-378
Cow position:
Alignm length: 379
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 138

Conread position: 10-421
Cow position:
Alignm length: 415
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 137

Conread position: 13-302
Cow position:
Alignm length: 295
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 138

Conread position: 13-372
Cow position:
Alignm length: 365
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 138

Conread position: 13-423
Cow position:
Alignm length: 423
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 132

Conread position: 13-423
Cow position:
Alignm length: 416
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 138

Conread position: 14-297
Cow position:
Alignm length: 289
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 137

Conread position: 14-391
Cow position:
Alignm length: 388
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 61

Conread position: 15-422
Cow position:
Alignm length: 413
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 136

Conread position: 27-412
Cow position:
Alignm length: 393
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 68

Conread position: 28-353
Cow position:
Alignm length: 326
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 28-384
Cow position:
Alignm length: 357
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 0

Conread position: 28-423
Cow position:
Alignm length: 398
Alignm identity: 268
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 373, 95

Conread position: 55-421
Cow position:
Alignm length: 367
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 0

Conread position: 55-423
Cow position:
Alignm length: 369
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 0

Conread position: 55-423
Cow position:
Alignm length: 369
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 0

Conread position: 55-425
Cow position:
Alignm length: 371
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 0

Conread position: 59-423
Cow position:
Alignm length: 366
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 352, 87

Conread position: 159-425
Cow position:
Alignm length: 267
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 249-423
Cow position:
Alignm length: 175
Alignm identity: 126
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 272-425
Cow position:
Alignm length: 154
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.