Cow genome map
| Conread name: | rtra32_o15.y1 |
| Conread position: | 1-174 |
| Cow position: | chr24:16084265-16084090 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 32, 150 |
| Conread position: | 1-202 |
| Cow position: | chr24:8030541-8030744 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 34, 151 |
| Conread position: | 1-209 |
| Cow position: | chr24:6434628-6434839 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 32, 151 |
| Conread position: | 1-216 |
| Cow position: | chr24:7090775-7090556 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 32, 153 |
| Conread position: | 1-312 |
| Cow position: | chr24:16472291-16472602 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 71 |
| Conread position: | 1-360 |
| Cow position: | chr24:36559365-36559008 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 150 |
| Conread position: | 1-365 |
| Cow position: | chr24:12130577-12130220 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 153 |
| Conread position: | 1-381 |
| Cow position: | chr24:22793562-22793946 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 154 |
| Conread position: | 1-419 |
| Cow position: | chr24:5992839-5992418 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 154 |
| Conread position: | 1-419 |
| Cow position: | chr24:6669752-6669335 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 95 |
| Conread position: | 1-422 |
| Cow position: | chr24:19833782-19834200 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 153 |
| Conread position: | 1-423 |
| Cow position: | chr24:148222-147799 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 152 |
| Conread position: | 1-423 |
| Cow position: | chr24:1449650-1450055 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 288 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 32, 101 |
| Conread position: | 1-423 |
| Cow position: | chr24:4415133-4414721 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 153 |
| Conread position: | 1-423 |
| Cow position: | chr24:12086596-12087017 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 149 |
| Conread position: | 1-423 |
| Cow position: | chr24:12237627-12238054 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 159 |
| Conread position: | 1-423 |
| Cow position: | chr24:12335379-12334948 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 150 |
| Conread position: | 1-423 |
| Cow position: | chr24:12484928-12484507 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 148 |
| Conread position: | 1-423 |
| Cow position: | chr24:17696581-17696161 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 152 |
| Conread position: | 1-423 |
| Cow position: | chr24:22971487-22971903 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 146 |
| Conread position: | 1-423 |
| Cow position: | chr24:29187680-29188101 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 153 |
| Conread position: | 1-423 |
| Cow position: | chr24:29305933-29305510 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 150 |
| Conread position: | 3-423 |
| Cow position: | chr24:6084463-6084879 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 148 |
| Conread position: | 4-323 |
| Cow position: | chr24:12796815-12796511 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 139 |
| Conread position: | 4-423 |
| Cow position: | chr24:33933766-33934185 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 147 |
| Conread position: | 5-273 |
| Cow position: | chr24:6336250-6336506 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 28, 152 |
| Conread position: | 5-423 |
| Cow position: | chr24:14390159-14389724 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 62 |
| Conread position: | 12-423 |
| Cow position: | chr24:6660094-6659681 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 139 |
| Conread position: | 13-309 |
| Cow position: | chr24:7061796-7062092 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 138 |
| Conread position: | 13-423 |
| Cow position: | chr24:6024701-6024293 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 47 |
| Conread position: | 13-423 |
| Cow position: | chr24:6646102-6646512 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 133 |
| Conread position: | 13-423 |
| Cow position: | chr24:9188329-9187923 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 138 |
| Conread position: | 13-423 |
| Cow position: | chr24:13188575-13188982 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 138 |
| Conread position: | 13-423 |
| Cow position: | chr24:43814166-43814575 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 89 |
| Conread position: | 13-423 |
| Cow position: | chr24:44017935-44018344 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 138 |
| Conread position: | 28-423 |
| Cow position: | chr24:14754578-14754187 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 373, 118 |
| Conread position: | 28-423 |
| Cow position: | chr24:23505440-23505054 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 104-423 |
| Cow position: | chr24:9544561-9544875 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 113-423 |
| Cow position: | chr24:12700312-12700006 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 33 |
| Conread position: | 179-423 |
| Cow position: | chr24:6435045-6435289 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 22 |
| Conread position: | 270-419 |
| Cow position: | chr24:13232910-13233061 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 72, 0 |
Show alignments to all cow chromosomes.