Cow genome map
| Conread name: | rtra32_o15.y1 |
| Conread position: | 1-318 |
| Cow position: | chr25:18274629-18274309 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 225 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 32, 150 |
| Conread position: | 1-332 |
| Cow position: | chr25:8675268-8675599 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 150 |
| Conread position: | 1-333 |
| Cow position: | chr25:18889662-18889333 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 150 |
| Conread position: | 1-341 |
| Cow position: | chr25:19917430-19917770 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 150 |
| Conread position: | 1-342 |
| Cow position: | chr25:11932749-11932412 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 150 |
| Conread position: | 1-378 |
| Cow position: | chr25:18194752-18194377 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 150 |
| Conread position: | 1-388 |
| Cow position: | chr25:18422380-18422754 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 270 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 32, 153 |
| Conread position: | 1-392 |
| Cow position: | chr25:24659606-24659986 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 95 |
| Conread position: | 1-423 |
| Cow position: | chr25:13781383-13781805 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 153 |
| Conread position: | 1-423 |
| Cow position: | chr25:26279608-26280015 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-423 |
| Cow position: | chr25:26879545-26879963 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 152 |
| Conread position: | 1-423 |
| Cow position: | chr25:32580311-32580726 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 66 |
| Conread position: | 1-423 |
| Cow position: | chr25:34346664-34346243 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 87 |
| Conread position: | 1-425 |
| Cow position: | chr25:12942347-12941913 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 153 |
| Conread position: | 2-423 |
| Cow position: | chr25:17589207-17588785 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 150 |
| Conread position: | 3-356 |
| Cow position: | chr25:18254623-18254280 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 239 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 30, 16 |
| Conread position: | 3-372 |
| Cow position: | chr25:33244618-33244965 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 268 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 30, 103 |
| Conread position: | 5-423 |
| Cow position: | chr25:18303762-18304165 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 144 |
| Conread position: | 6-124 |
| Cow position: | chr25:25507031-25507149 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 92 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-383 |
| Cow position: | chr25:34014127-34013748 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 144 |
| Conread position: | 10-253 |
| Cow position: | chr25:17560271-17560033 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 178 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 24, 126 |
| Conread position: | 13-423 |
| Cow position: | chr25:6172261-6172671 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 138 |
| Conread position: | 13-423 |
| Cow position: | chr25:27022205-27021813 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 129 |
| Conread position: | 17-422 |
| Cow position: | chr25:22147907-22148310 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 92 |
| Conread position: | 19-308 |
| Cow position: | chr25:14958475-14958185 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 36, 124 |
| Conread position: | 28-256 |
| Cow position: | chr25:9544447-9544667 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 201, 43 |
| Conread position: | 28-354 |
| Cow position: | chr25:20775542-20775235 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 28-423 |
| Cow position: | chr25:13550652-13550262 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 29-355 |
| Cow position: | chr25:24217045-24216728 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 167, 63 |
| Conread position: | 36-423 |
| Cow position: | chr25:18175670-18176046 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 371, 50 |
| Conread position: | 54-423 |
| Cow position: | chr25:20630041-20630401 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 132-423 |
| Cow position: | chr25:25507189-25507475 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
Show alignments to all cow chromosomes.