Cow genome map

Conread name: rtra32_o15.y1

Conread position: 1-234
Cow position:
Alignm length: 239
Alignm identity: 176
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 32, 142

Conread position: 1-255
Cow position:
Alignm length: 262
Alignm identity: 176
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 30, 124

Conread position: 1-257
Cow position:
Alignm length: 262
Alignm identity: 196
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 32, 139

Conread position: 1-257
Cow position:
Alignm length: 262
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-271
Cow position:
Alignm length: 279
Alignm identity: 187
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 32, 150

Conread position: 1-286
Cow position:
Alignm length: 291
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 74

Conread position: 1-327
Cow position:
Alignm length: 332
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 66

Conread position: 1-342
Cow position:
Alignm length: 347
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-364
Cow position:
Alignm length: 370
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 114

Conread position: 1-382
Cow position:
Alignm length: 387
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-420
Cow position:
Alignm length: 425
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 153

Conread position: 1-421
Cow position:
Alignm length: 427
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 56

Conread position: 1-422
Cow position:
Alignm length: 427
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 152

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 153

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 94

Conread position: 1-423
Cow position:
Alignm length: 429
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 148

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 429
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 13

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 68

Conread position: 1-423
Cow position:
Alignm length: 432
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 157

Conread position: 1-423
Cow position:
Alignm length: 434
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 432
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 1-423
Cow position:
Alignm length: 429
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 95

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 155

Conread position: 1-423
Cow position:
Alignm length: 430
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 67

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 153

Conread position: 1-423
Cow position:
Alignm length: 429
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 154

Conread position: 1-423
Cow position:
Alignm length: 429
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 108

Conread position: 1-423
Cow position:
Alignm length: 448
Alignm identity: 311
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 22, 68

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 432
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 154

Conread position: 1-424
Cow position:
Alignm length: 429
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 153

Conread position: 1-425
Cow position:
Alignm length: 430
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 108

Conread position: 1-425
Cow position:
Alignm length: 430
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 3-423
Cow position:
Alignm length: 427
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 148

Conread position: 3-423
Cow position:
Alignm length: 426
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 99

Conread position: 5-348
Cow position:
Alignm length: 346
Alignm identity: 222
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 11, 155

Conread position: 5-423
Cow position:
Alignm length: 421
Alignm identity: 272
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 54, 13

Conread position: 6-423
Cow position:
Alignm length: 419
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 113

Conread position: 7-339
Cow position:
Alignm length: 338
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 144

Conread position: 10-401
Cow position:
Alignm length: 396
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 46

Conread position: 10-420
Cow position:
Alignm length: 415
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 82

Conread position: 13-192
Cow position:
Alignm length: 187
Alignm identity: 135
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 23, 139

Conread position: 13-244
Cow position:
Alignm length: 237
Alignm identity: 175
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 20, 138

Conread position: 13-250
Cow position:
Alignm length: 243
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 138

Conread position: 13-423
Cow position:
Alignm length: 416
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 138

Conread position: 13-423
Cow position:
Alignm length: 416
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 44

Conread position: 13-423
Cow position:
Alignm length: 418
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 142

Conread position: 21-425
Cow position:
Alignm length: 409
Alignm identity: 258
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 9, 92

Conread position: 23-207
Cow position:
Alignm length: 186
Alignm identity: 142
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 11, 86

Conread position: 32-384
Cow position:
Alignm length: 353
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 0

Conread position: 35-421
Cow position:
Alignm length: 387
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 47-208
Cow position:
Alignm length: 162
Alignm identity: 120
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 99, 0

Conread position: 82-395
Cow position:
Alignm length: 314
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 106-423
Cow position:
Alignm length: 319
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 40

Conread position: 150-423
Cow position:
Alignm length: 274
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 204-423
Cow position:
Alignm length: 220
Alignm identity: 156
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 13, 0

Conread position: 206-422
Cow position:
Alignm length: 220
Alignm identity: 160
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 6, 12

Conread position: 226-423
Cow position:
Alignm length: 199
Alignm identity: 147
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 85, 15

Conread position: 237-423
Cow position:
Alignm length: 188
Alignm identity: 143
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 19, 26

Conread position: 239-418
Cow position:
Alignm length: 180
Alignm identity: 133
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 18, 0

Show alignments to all cow chromosomes.