Cow genome map
| Conread name: | rtra32_o15.y1 |
| Conread position: | 1-203 |
| Cow position: | chr29:42650586-42650791 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 32, 143 |
| Conread position: | 1-238 |
| Cow position: | chr29:6266180-6265941 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 185 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 32, 128 |
| Conread position: | 1-303 |
| Cow position: | chr29:19653429-19653738 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 32, 70 |
| Conread position: | 1-331 |
| Cow position: | chr29:42802446-42802776 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 143 |
| Conread position: | 1-338 |
| Cow position: | chr29:7844645-7844982 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 150 |
| Conread position: | 1-352 |
| Cow position: | chr29:802605-802265 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 57 |
| Conread position: | 1-378 |
| Cow position: | chr29:32540131-32540501 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 74 |
| Conread position: | 1-378 |
| Cow position: | chr29:45587047-45586670 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 150 |
| Conread position: | 1-386 |
| Cow position: | chr29:19622927-19622543 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 150 |
| Conread position: | 1-420 |
| Cow position: | chr29:5982395-5981979 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 148 |
| Conread position: | 1-421 |
| Cow position: | chr29:10823648-10823239 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 153 |
| Conread position: | 1-422 |
| Cow position: | chr29:2841052-2840642 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 61 |
| Conread position: | 1-422 |
| Cow position: | chr29:21426709-21426289 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 145 |
| Conread position: | 1-422 |
| Cow position: | chr29:31181729-31182139 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 70 |
| Conread position: | 1-423 |
| Cow position: | chr29:669743-669322 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 150 |
| Conread position: | 1-423 |
| Cow position: | chr29:2100166-2100587 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 150 |
| Conread position: | 1-423 |
| Cow position: | chr29:2690221-2690643 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 152 |
| Conread position: | 1-423 |
| Cow position: | chr29:7430898-7430481 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 150 |
| Conread position: | 1-423 |
| Cow position: | chr29:10647930-10647514 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 150 |
| Conread position: | 1-423 |
| Cow position: | chr29:18856629-18856208 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 153 |
| Conread position: | 1-423 |
| Cow position: | chr29:19885384-19885803 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 95 |
| Conread position: | 1-423 |
| Cow position: | chr29:20251479-20251901 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 150 |
| Conread position: | 1-423 |
| Cow position: | chr29:25932222-25931801 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 153 |
| Conread position: | 1-423 |
| Cow position: | chr29:26164502-26164090 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 150 |
| Conread position: | 1-423 |
| Cow position: | chr29:27250028-27249607 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 13 |
| Conread position: | 1-423 |
| Cow position: | chr29:27980605-27980189 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 147 |
| Conread position: | 1-423 |
| Cow position: | chr29:34799489-34799068 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 150 |
| Conread position: | 1-423 |
| Cow position: | chr29:34925793-34926214 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 150 |
| Conread position: | 1-423 |
| Cow position: | chr29:38227300-38227715 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 154 |
| Conread position: | 1-423 |
| Cow position: | chr29:39079390-39078969 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 119 |
| Conread position: | 1-423 |
| Cow position: | chr29:40502663-40502241 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 150 |
| Conread position: | 1-423 |
| Cow position: | chr29:43322875-43323296 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 66 |
| Conread position: | 1-424 |
| Cow position: | chr29:35297183-35297590 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 151 |
| Conread position: | 2-423 |
| Cow position: | chr29:9643436-9643025 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 73 |
| Conread position: | 2-423 |
| Cow position: | chr29:45460038-45460458 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 16 |
| Conread position: | 5-423 |
| Cow position: | chr29:48148-47731 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 149 |
| Conread position: | 5-423 |
| Cow position: | chr29:16022855-16023275 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 147 |
| Conread position: | 8-423 |
| Cow position: | chr29:14085803-14085393 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 86 |
| Conread position: | 9-423 |
| Cow position: | chr29:14586244-14586659 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 142 |
| Conread position: | 10-279 |
| Cow position: | chr29:16110743-16111007 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 195 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 19, 54 |
| Conread position: | 13-423 |
| Cow position: | chr29:13582394-13582816 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 140 |
| Conread position: | 13-423 |
| Cow position: | chr29:15894524-15894114 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 138 |
| Conread position: | 13-423 |
| Cow position: | chr29:15968535-15968125 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 138 |
| Conread position: | 28-341 |
| Cow position: | chr29:410173-409868 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 223 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 292, 118 |
| Conread position: | 28-412 |
| Cow position: | chr29:610266-609890 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 292, 69 |
| Conread position: | 57-425 |
| Cow position: | chr29:251149-251511 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 89 |
| Conread position: | 113-423 |
| Cow position: | chr29:32559324-32559018 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 33 |
| Conread position: | 260-419 |
| Cow position: | chr29:8664098-8664256 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 291-423 |
| Cow position: | chr29:16110983-16111115 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.