Cow genome map
| Conread name: | rtra32_o15.y1 | 
| Conread position: | 1-190 | 
| Cow position: | chr3:24591080-24590898 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 67, 0 | 
| Conread position: | 1-215 | 
| Cow position: | chr3:74439535-74439750 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 32, 150 | 
| Conread position: | 1-239 | 
| Cow position: | chr3:77424043-77424284 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 32, 150 | 
| Conread position: | 1-254 | 
| Cow position: | chr3:66991329-66991573 (view UCSC Genome Browser custom track) | 
| Alignm length: | 259 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 32, 152 | 
| Conread position: | 1-257 | 
| Cow position: | chr3:36881682-36881424 (view UCSC Genome Browser custom track) | 
| Alignm length: | 264 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 32, 152 | 
| Conread position: | 1-294 | 
| Cow position: | chr3:594815-595108 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 150 | 
| Conread position: | 1-298 | 
| Cow position: | chr3:41303748-41304044 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 1e-20 | 
| Alignm gaps (pig, cow): | 34, 153 | 
| Conread position: | 1-313 | 
| Cow position: | chr3:5995463-5995154 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 148 | 
| Conread position: | 1-320 | 
| Cow position: | chr3:49272252-49271935 (view UCSC Genome Browser custom track) | 
| Alignm length: | 325 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 32, 95 | 
| Conread position: | 1-342 | 
| Cow position: | chr3:29331039-29330698 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 262 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 150 | 
| Conread position: | 1-367 | 
| Cow position: | chr3:18356265-18355903 (view UCSC Genome Browser custom track) | 
| Alignm length: | 373 | 
| Alignm identity: | 259 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 151 | 
| Conread position: | 1-371 | 
| Cow position: | chr3:49613745-49613379 (view UCSC Genome Browser custom track) | 
| Alignm length: | 377 | 
| Alignm identity: | 286 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 151 | 
| Conread position: | 1-378 | 
| Cow position: | chr3:18542169-18541796 (view UCSC Genome Browser custom track) | 
| Alignm length: | 383 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 138 | 
| Conread position: | 1-378 | 
| Cow position: | chr3:48230217-48229855 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 283 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 41, 34 | 
| Conread position: | 1-386 | 
| Cow position: | chr3:21259678-21259302 (view UCSC Genome Browser custom track) | 
| Alignm length: | 389 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 30, 22 | 
| Conread position: | 1-392 | 
| Cow position: | chr3:37625212-37625591 (view UCSC Genome Browser custom track) | 
| Alignm length: | 393 | 
| Alignm identity: | 274 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 103, 123 | 
| Conread position: | 1-408 | 
| Cow position: | chr3:34030660-34030256 (view UCSC Genome Browser custom track) | 
| Alignm length: | 413 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 150 | 
| Conread position: | 1-419 | 
| Cow position: | chr3:37969280-37969692 (view UCSC Genome Browser custom track) | 
| Alignm length: | 424 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 52 | 
| Conread position: | 1-421 | 
| Cow position: | chr3:18463328-18462918 (view UCSC Genome Browser custom track) | 
| Alignm length: | 422 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 258, 31 | 
| Conread position: | 1-421 | 
| Cow position: | chr3:59861604-59862024 (view UCSC Genome Browser custom track) | 
| Alignm length: | 426 | 
| Alignm identity: | 325 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 153 | 
| Conread position: | 1-422 | 
| Cow position: | chr3:10239892-10240311 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 323 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 150 | 
| Conread position: | 1-422 | 
| Cow position: | chr3:46502772-46503197 (view UCSC Genome Browser custom track) | 
| Alignm length: | 433 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 150 | 
| Conread position: | 1-422 | 
| Cow position: | chr3:49137300-49136888 (view UCSC Genome Browser custom track) | 
| Alignm length: | 427 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 95 | 
| Conread position: | 1-423 | 
| Cow position: | chr3:2917693-2918114 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 319 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 35, 56 | 
| Conread position: | 1-423 | 
| Cow position: | chr3:3523253-3523673 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 325 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 149 | 
| Conread position: | 1-423 | 
| Cow position: | chr3:5883777-5884195 (view UCSC Genome Browser custom track) | 
| Alignm length: | 427 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 149 | 
| Conread position: | 1-423 | 
| Cow position: | chr3:5953948-5953527 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 304 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 150 | 
| Conread position: | 1-423 | 
| Cow position: | chr3:6686046-6686461 (view UCSC Genome Browser custom track) | 
| Alignm length: | 430 | 
| Alignm identity: | 332 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 15, 70 | 
| Conread position: | 1-423 | 
| Cow position: | chr3:19756720-19756297 (view UCSC Genome Browser custom track) | 
| Alignm length: | 429 | 
| Alignm identity: | 325 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 154 | 
| Conread position: | 1-423 | 
| Cow position: | chr3:19878889-19879306 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 320 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 34, 150 | 
| Conread position: | 1-423 | 
| Cow position: | chr3:20380775-20381194 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 325 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 152 | 
| Conread position: | 1-423 | 
| Cow position: | chr3:23290104-23289682 (view UCSC Genome Browser custom track) | 
| Alignm length: | 430 | 
| Alignm identity: | 318 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 153 | 
| Conread position: | 1-423 | 
| Cow position: | chr3:24314699-24315120 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 322 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 150 | 
| Conread position: | 1-423 | 
| Cow position: | chr3:30314805-30315215 (view UCSC Genome Browser custom track) | 
| Alignm length: | 425 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 365, 35 | 
| Conread position: | 1-423 | 
| Cow position: | chr3:32841786-32841367 (view UCSC Genome Browser custom track) | 
| Alignm length: | 434 | 
| Alignm identity: | 282 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 24, 125 | 
| Conread position: | 1-423 | 
| Cow position: | chr3:36117894-36118315 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 325 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 152 | 
| Conread position: | 1-423 | 
| Cow position: | chr3:40339880-40339461 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 323 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 152 | 
| Conread position: | 1-423 | 
| Cow position: | chr3:40823625-40824043 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 326 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 150 | 
| Conread position: | 1-423 | 
| Cow position: | chr3:41211505-41211082 (view UCSC Genome Browser custom track) | 
| Alignm length: | 430 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 34, 152 | 
| Conread position: | 1-423 | 
| Cow position: | chr3:42432471-42432873 (view UCSC Genome Browser custom track) | 
| Alignm length: | 429 | 
| Alignm identity: | 304 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 95 | 
| Conread position: | 1-423 | 
| Cow position: | chr3:45895319-45894899 (view UCSC Genome Browser custom track) | 
| Alignm length: | 440 | 
| Alignm identity: | 319 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 66 | 
| Conread position: | 1-423 | 
| Cow position: | chr3:45974736-45975154 (view UCSC Genome Browser custom track) | 
| Alignm length: | 438 | 
| Alignm identity: | 318 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 66 | 
| Conread position: | 1-423 | 
| Cow position: | chr3:46861071-46860650 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 318 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 150 | 
| Conread position: | 1-423 | 
| Cow position: | chr3:49678030-49678454 (view UCSC Genome Browser custom track) | 
| Alignm length: | 432 | 
| Alignm identity: | 326 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 152 | 
| Conread position: | 1-423 | 
| Cow position: | chr3:53515851-53516266 (view UCSC Genome Browser custom track) | 
| Alignm length: | 424 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 414, 26 | 
| Conread position: | 1-423 | 
| Cow position: | chr3:57484491-57484074 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 324 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 108 | 
| Conread position: | 1-423 | 
| Cow position: | chr3:58947864-58948267 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 105 | 
| Conread position: | 1-423 | 
| Cow position: | chr3:64017128-64016709 (view UCSC Genome Browser custom track) | 
| Alignm length: | 426 | 
| Alignm identity: | 321 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 20, 118 | 
| Conread position: | 1-423 | 
| Cow position: | chr3:64027854-64027432 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 322 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 150 | 
| Conread position: | 1-423 | 
| Cow position: | chr3:64650858-64651280 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 320 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 150 | 
| Conread position: | 1-423 | 
| Cow position: | chr3:66890731-66890312 (view UCSC Genome Browser custom track) | 
| Alignm length: | 429 | 
| Alignm identity: | 317 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 150 | 
| Conread position: | 1-423 | 
| Cow position: | chr3:68873523-68873102 (view UCSC Genome Browser custom track) | 
| Alignm length: | 429 | 
| Alignm identity: | 313 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 151 | 
| Conread position: | 1-423 | 
| Cow position: | chr3:72630307-72630727 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 328 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 95 | 
| Conread position: | 1-423 | 
| Cow position: | chr3:75040931-75040509 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 325 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 153 | 
| Conread position: | 1-425 | 
| Cow position: | chr3:50915564-50915987 (view UCSC Genome Browser custom track) | 
| Alignm length: | 430 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 150 | 
| Conread position: | 2-422 | 
| Cow position: | chr3:47081176-47080761 (view UCSC Genome Browser custom track) | 
| Alignm length: | 426 | 
| Alignm identity: | 323 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 9 | 
| Conread position: | 3-159 | 
| Cow position: | chr3:64357603-64357439 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 1e-20 | 
| Alignm gaps (pig, cow): | 32, 0 | 
| Conread position: | 3-307 | 
| Cow position: | chr3:18575954-18575661 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 148, 9 | 
| Conread position: | 3-423 | 
| Cow position: | chr3:7480992-7480577 (view UCSC Genome Browser custom track) | 
| Alignm length: | 426 | 
| Alignm identity: | 318 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 108 | 
| Conread position: | 3-423 | 
| Cow position: | chr3:21182447-21182041 (view UCSC Genome Browser custom track) | 
| Alignm length: | 426 | 
| Alignm identity: | 317 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 140 | 
| Conread position: | 3-423 | 
| Cow position: | chr3:49544970-49544555 (view UCSC Genome Browser custom track) | 
| Alignm length: | 426 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 123 | 
| Conread position: | 4-351 | 
| Cow position: | chr3:15178943-15179281 (view UCSC Genome Browser custom track) | 
| Alignm length: | 351 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 20, 61 | 
| Conread position: | 4-386 | 
| Cow position: | chr3:4737738-4737359 (view UCSC Genome Browser custom track) | 
| Alignm length: | 393 | 
| Alignm identity: | 273 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 29, 152 | 
| Conread position: | 5-324 | 
| Cow position: | chr3:3981990-3982299 (view UCSC Genome Browser custom track) | 
| Alignm length: | 325 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 28, 115 | 
| Conread position: | 5-423 | 
| Cow position: | chr3:56340178-56339765 (view UCSC Genome Browser custom track) | 
| Alignm length: | 422 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 318, 23 | 
| Conread position: | 9-324 | 
| Cow position: | chr3:48842410-48842722 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 5, 143 | 
| Conread position: | 9-423 | 
| Cow position: | chr3:2907523-2907118 (view UCSC Genome Browser custom track) | 
| Alignm length: | 421 | 
| Alignm identity: | 311 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 23, 92 | 
| Conread position: | 9-423 | 
| Cow position: | chr3:52863887-52863478 (view UCSC Genome Browser custom track) | 
| Alignm length: | 418 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 12, 57 | 
| Conread position: | 10-423 | 
| Cow position: | chr3:68699728-68699312 (view UCSC Genome Browser custom track) | 
| Alignm length: | 421 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 138 | 
| Conread position: | 11-423 | 
| Cow position: | chr3:45774164-45773750 (view UCSC Genome Browser custom track) | 
| Alignm length: | 425 | 
| Alignm identity: | 281 | 
| Alignm E-value: | 8.99998e-41 | 
| Alignm gaps (pig, cow): | 22, 155 | 
| Conread position: | 11-425 | 
| Cow position: | chr3:77443607-77444003 (view UCSC Genome Browser custom track) | 
| Alignm length: | 420 | 
| Alignm identity: | 271 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 20, 136 | 
| Conread position: | 12-423 | 
| Cow position: | chr3:18811749-18812160 (view UCSC Genome Browser custom track) | 
| Alignm length: | 418 | 
| Alignm identity: | 319 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 21, 130 | 
| Conread position: | 13-222 | 
| Cow position: | chr3:7169036-7169247 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 20, 139 | 
| Conread position: | 13-352 | 
| Cow position: | chr3:1516399-1516738 (view UCSC Genome Browser custom track) | 
| Alignm length: | 345 | 
| Alignm identity: | 260 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 138 | 
| Conread position: | 13-423 | 
| Cow position: | chr3:6782628-6783024 (view UCSC Genome Browser custom track) | 
| Alignm length: | 416 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 20, 138 | 
| Conread position: | 13-423 | 
| Cow position: | chr3:18859658-18860064 (view UCSC Genome Browser custom track) | 
| Alignm length: | 417 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 20, 55 | 
| Conread position: | 13-423 | 
| Cow position: | chr3:19736824-19737234 (view UCSC Genome Browser custom track) | 
| Alignm length: | 416 | 
| Alignm identity: | 313 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 138 | 
| Conread position: | 13-423 | 
| Cow position: | chr3:32622793-32622391 (view UCSC Genome Browser custom track) | 
| Alignm length: | 416 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 140 | 
| Conread position: | 13-423 | 
| Cow position: | chr3:45032984-45033399 (view UCSC Genome Browser custom track) | 
| Alignm length: | 421 | 
| Alignm identity: | 317 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 20, 138 | 
| Conread position: | 13-423 | 
| Cow position: | chr3:46679675-46680081 (view UCSC Genome Browser custom track) | 
| Alignm length: | 416 | 
| Alignm identity: | 304 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 138 | 
| Conread position: | 13-423 | 
| Cow position: | chr3:66620423-66620835 (view UCSC Genome Browser custom track) | 
| Alignm length: | 418 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 20, 143 | 
| Conread position: | 14-422 | 
| Cow position: | chr3:14439516-14439113 (view UCSC Genome Browser custom track) | 
| Alignm length: | 415 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 137 | 
| Conread position: | 14-423 | 
| Cow position: | chr3:19939124-19939544 (view UCSC Genome Browser custom track) | 
| Alignm length: | 427 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 137 | 
| Conread position: | 14-423 | 
| Cow position: | chr3:22336133-22336542 (view UCSC Genome Browser custom track) | 
| Alignm length: | 415 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 137 | 
| Conread position: | 18-299 | 
| Cow position: | chr3:3054936-3055199 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 68, 0 | 
| Conread position: | 28-250 | 
| Cow position: | chr3:70097495-70097709 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 135, 29 | 
| Conread position: | 28-421 | 
| Cow position: | chr3:83232966-83232590 (view UCSC Genome Browser custom track) | 
| Alignm length: | 394 | 
| Alignm identity: | 267 | 
| Alignm E-value: | 4.06377e-44 | 
| Alignm gaps (pig, cow): | 71, 0 | 
| Conread position: | 28-423 | 
| Cow position: | chr3:7158452-7158073 (view UCSC Genome Browser custom track) | 
| Alignm length: | 396 | 
| Alignm identity: | 300 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 118, 0 | 
| Conread position: | 28-423 | 
| Cow position: | chr3:23213806-23213425 (view UCSC Genome Browser custom track) | 
| Alignm length: | 396 | 
| Alignm identity: | 293 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 34, 0 | 
| Conread position: | 28-423 | 
| Cow position: | chr3:29578897-29579277 (view UCSC Genome Browser custom track) | 
| Alignm length: | 396 | 
| Alignm identity: | 291 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 120, 0 | 
| Conread position: | 28-425 | 
| Cow position: | chr3:52654599-52654225 (view UCSC Genome Browser custom track) | 
| Alignm length: | 398 | 
| Alignm identity: | 263 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 57, 0 | 
| Conread position: | 30-423 | 
| Cow position: | chr3:63003272-63002894 (view UCSC Genome Browser custom track) | 
| Alignm length: | 395 | 
| Alignm identity: | 294 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 389, 5 | 
| Conread position: | 32-419 | 
| Cow position: | chr3:27918703-27919084 (view UCSC Genome Browser custom track) | 
| Alignm length: | 388 | 
| Alignm identity: | 291 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 114, 0 | 
| Conread position: | 52-423 | 
| Cow position: | chr3:51242660-51243023 (view UCSC Genome Browser custom track) | 
| Alignm length: | 372 | 
| Alignm identity: | 283 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 94, 0 | 
| Conread position: | 75-423 | 
| Cow position: | chr3:47177965-47177620 (view UCSC Genome Browser custom track) | 
| Alignm length: | 351 | 
| Alignm identity: | 262 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 260, 71 | 
| Conread position: | 76-385 | 
| Cow position: | chr3:37953662-37953364 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 1e-20 | 
| Alignm gaps (pig, cow): | 149, 70 | 
| Conread position: | 82-421 | 
| Cow position: | chr3:50127334-50126983 (view UCSC Genome Browser custom track) | 
| Alignm length: | 356 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 8, 131 | 
| Conread position: | 87-383 | 
| Cow position: | chr3:4286121-4286412 (view UCSC Genome Browser custom track) | 
| Alignm length: | 298 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 173, 59 | 
| Conread position: | 111-423 | 
| Cow position: | chr3:2710518-2710217 (view UCSC Genome Browser custom track) | 
| Alignm length: | 313 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 157-423 | 
| Cow position: | chr3:19890208-19889946 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 8.99998e-41 | 
| Alignm gaps (pig, cow): | 245, 43 | 
| Conread position: | 183-423 | 
| Cow position: | chr3:19800762-19800524 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 221, 17 | 
| Conread position: | 221-423 | 
| Cow position: | chr3:7247133-7247328 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 20, 0 | 
| Conread position: | 234-421 | 
| Cow position: | chr3:42447570-42447757 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 247-423 | 
| Cow position: | chr3:4028365-4028538 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 47, 34 | 
Show alignments to all cow chromosomes.
