Cow genome map

Conread name: rtra32_o15.y1

Conread position: 1-204
Cow position:
Alignm length: 209
Alignm identity: 157
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 34, 150

Conread position: 1-249
Cow position:
Alignm length: 256
Alignm identity: 189
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 32, 152

Conread position: 1-311
Cow position:
Alignm length: 318
Alignm identity: 216
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 13, 151

Conread position: 1-334
Cow position:
Alignm length: 353
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 11

Conread position: 1-369
Cow position:
Alignm length: 374
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-373
Cow position:
Alignm length: 378
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-378
Cow position:
Alignm length: 384
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 151

Conread position: 1-391
Cow position:
Alignm length: 399
Alignm identity: 265
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 32, 155

Conread position: 1-419
Cow position:
Alignm length: 424
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 87

Conread position: 1-419
Cow position:
Alignm length: 424
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 119

Conread position: 1-422
Cow position:
Alignm length: 427
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 429
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 128

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 431
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 74

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 52

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 119

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 150

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 153

Conread position: 1-423
Cow position:
Alignm length: 423
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 2-357
Cow position:
Alignm length: 362
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 121

Conread position: 3-209
Cow position:
Alignm length: 212
Alignm identity: 159
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 30, 148

Conread position: 3-421
Cow position:
Alignm length: 425
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 148

Conread position: 3-423
Cow position:
Alignm length: 427
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 148

Conread position: 4-286
Cow position:
Alignm length: 289
Alignm identity: 199
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 29, 118

Conread position: 4-423
Cow position:
Alignm length: 420
Alignm identity: 279
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 31, 0

Conread position: 5-359
Cow position:
Alignm length: 361
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 146

Conread position: 12-423
Cow position:
Alignm length: 417
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 139

Conread position: 12-425
Cow position:
Alignm length: 419
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 142

Conread position: 13-174
Cow position:
Alignm length: 167
Alignm identity: 124
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 22, 138

Conread position: 13-379
Cow position:
Alignm length: 380
Alignm identity: 258
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 20, 145

Conread position: 13-423
Cow position:
Alignm length: 416
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 140

Conread position: 13-423
Cow position:
Alignm length: 420
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 138

Conread position: 13-423
Cow position:
Alignm length: 416
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 94

Conread position: 13-423
Cow position:
Alignm length: 416
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 138

Conread position: 13-423
Cow position:
Alignm length: 416
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 138

Conread position: 13-423
Cow position:
Alignm length: 416
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 138

Conread position: 14-423
Cow position:
Alignm length: 418
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 86

Conread position: 15-423
Cow position:
Alignm length: 414
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 138

Conread position: 20-424
Cow position:
Alignm length: 406
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 129

Conread position: 27-345
Cow position:
Alignm length: 325
Alignm identity: 212
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 146, 119

Conread position: 28-224
Cow position:
Alignm length: 197
Alignm identity: 156
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 65, 0

Conread position: 28-309
Cow position:
Alignm length: 286
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 122

Conread position: 28-313
Cow position:
Alignm length: 286
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 0

Conread position: 28-422
Cow position:
Alignm length: 395
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 0

Conread position: 28-423
Cow position:
Alignm length: 396
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 0

Conread position: 29-360
Cow position:
Alignm length: 333
Alignm identity: 212
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 271, 50

Conread position: 82-423
Cow position:
Alignm length: 342
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 106-423
Cow position:
Alignm length: 319
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 42

Conread position: 106-423
Cow position:
Alignm length: 318
Alignm identity: 223
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 27, 0

Conread position: 112-422
Cow position:
Alignm length: 315
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 36

Conread position: 157-423
Cow position:
Alignm length: 271
Alignm identity: 177
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 159, 43

Conread position: 237-422
Cow position:
Alignm length: 186
Alignm identity: 141
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 66, 0

Conread position: 250-423
Cow position:
Alignm length: 174
Alignm identity: 130
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 72, 0

Show alignments to all cow chromosomes.