Cow genome map

Conread name: rtra32_o15.y1

Conread position: 1-176
Cow position:
Alignm length: 181
Alignm identity: 130
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 32, 89

Conread position: 1-220
Cow position:
Alignm length: 227
Alignm identity: 174
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 32, 152

Conread position: 1-238
Cow position:
Alignm length: 243
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-255
Cow position:
Alignm length: 260
Alignm identity: 178
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 32, 18

Conread position: 1-257
Cow position:
Alignm length: 263
Alignm identity: 194
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 32, 127

Conread position: 1-286
Cow position:
Alignm length: 291
Alignm identity: 205
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 32, 138

Conread position: 1-319
Cow position:
Alignm length: 324
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-326
Cow position:
Alignm length: 331
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 95

Conread position: 1-332
Cow position:
Alignm length: 339
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 152

Conread position: 1-364
Cow position:
Alignm length: 369
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 117

Conread position: 1-378
Cow position:
Alignm length: 383
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 55

Conread position: 1-400
Cow position:
Alignm length: 406
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-421
Cow position:
Alignm length: 426
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 74

Conread position: 1-421
Cow position:
Alignm length: 422
Alignm identity: 280
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 348, 85

Conread position: 1-422
Cow position:
Alignm length: 427
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 149

Conread position: 1-422
Cow position:
Alignm length: 428
Alignm identity: 286
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 32, 142

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 139

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 429
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 153

Conread position: 1-423
Cow position:
Alignm length: 431
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 151

Conread position: 1-423
Cow position:
Alignm length: 429
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 434
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 68

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 427
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 158

Conread position: 1-423
Cow position:
Alignm length: 438
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 163

Conread position: 1-423
Cow position:
Alignm length: 427
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 63

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 153

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 440
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 153

Conread position: 1-423
Cow position:
Alignm length: 432
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 104

Conread position: 1-423
Cow position:
Alignm length: 431
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 149

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 69

Conread position: 1-425
Cow position:
Alignm length: 439
Alignm identity: 291
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 32, 20

Conread position: 1-425
Cow position:
Alignm length: 432
Alignm identity: 281
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 20, 75

Conread position: 2-309
Cow position:
Alignm length: 313
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 149

Conread position: 3-423
Cow position:
Alignm length: 433
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 146

Conread position: 3-423
Cow position:
Alignm length: 426
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 127

Conread position: 4-223
Cow position:
Alignm length: 227
Alignm identity: 161
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 12, 100

Conread position: 4-252
Cow position:
Alignm length: 258
Alignm identity: 194
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 32, 63

Conread position: 4-356
Cow position:
Alignm length: 364
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 70

Conread position: 4-423
Cow position:
Alignm length: 422
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 140

Conread position: 5-366
Cow position:
Alignm length: 369
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 62

Conread position: 5-384
Cow position:
Alignm length: 385
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 146

Conread position: 6-423
Cow position:
Alignm length: 419
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 144

Conread position: 7-423
Cow position:
Alignm length: 423
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 134

Conread position: 8-343
Cow position:
Alignm length: 338
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 56

Conread position: 9-414
Cow position:
Alignm length: 407
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 33

Conread position: 9-421
Cow position:
Alignm length: 416
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 63

Conread position: 10-234
Cow position:
Alignm length: 226
Alignm identity: 174
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 19, 136

Conread position: 10-423
Cow position:
Alignm length: 419
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 144

Conread position: 10-423
Cow position:
Alignm length: 416
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 137

Conread position: 13-167
Cow position:
Alignm length: 160
Alignm identity: 117
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 22, 137

Conread position: 13-367
Cow position:
Alignm length: 360
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 138

Conread position: 13-423
Cow position:
Alignm length: 416
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 140

Conread position: 13-423
Cow position:
Alignm length: 416
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 67

Conread position: 13-423
Cow position:
Alignm length: 417
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 138

Conread position: 13-423
Cow position:
Alignm length: 416
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 138

Conread position: 13-423
Cow position:
Alignm length: 416
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 138

Conread position: 13-423
Cow position:
Alignm length: 411
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 14-423
Cow position:
Alignm length: 416
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 140

Conread position: 28-313
Cow position:
Alignm length: 287
Alignm identity: 198
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 61, 68

Conread position: 28-343
Cow position:
Alignm length: 317
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 119

Conread position: 28-412
Cow position:
Alignm length: 386
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 100

Conread position: 28-423
Cow position:
Alignm length: 397
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 118

Conread position: 28-423
Cow position:
Alignm length: 397
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 69

Conread position: 39-423
Cow position:
Alignm length: 385
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 0

Conread position: 41-346
Cow position:
Alignm length: 313
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 112

Conread position: 67-392
Cow position:
Alignm length: 327
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 79

Conread position: 75-254
Cow position:
Alignm length: 180
Alignm identity: 140
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 71, 0

Conread position: 225-423
Cow position:
Alignm length: 199
Alignm identity: 151
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 16, 0

Conread position: 266-423
Cow position:
Alignm length: 158
Alignm identity: 117
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.