Cow genome map

Conread name: rtra32_o15.y1

Conread position: 1-205
Cow position:
Alignm length: 209
Alignm identity: 157
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 23, 149

Conread position: 1-217
Cow position:
Alignm length: 222
Alignm identity: 161
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 32, 150

Conread position: 1-313
Cow position:
Alignm length: 318
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 52

Conread position: 1-365
Cow position:
Alignm length: 371
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 74

Conread position: 1-373
Cow position:
Alignm length: 378
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 101

Conread position: 1-378
Cow position:
Alignm length: 383
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-380
Cow position:
Alignm length: 394
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 151

Conread position: 1-408
Cow position:
Alignm length: 414
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 151

Conread position: 1-421
Cow position:
Alignm length: 426
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 153

Conread position: 1-421
Cow position:
Alignm length: 432
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 149

Conread position: 1-422
Cow position:
Alignm length: 427
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 67

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 96

Conread position: 1-423
Cow position:
Alignm length: 429
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 153

Conread position: 1-423
Cow position:
Alignm length: 429
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 429
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 151

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 437
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 429
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 95

Conread position: 1-423
Cow position:
Alignm length: 431
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 207

Conread position: 1-423
Cow position:
Alignm length: 427
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 70

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 153

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 153

Conread position: 1-423
Cow position:
Alignm length: 430
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 158

Conread position: 1-423
Cow position:
Alignm length: 424
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 34

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 79

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 83

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 153

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 429
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 143

Conread position: 1-423
Cow position:
Alignm length: 431
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 155

Conread position: 1-423
Cow position:
Alignm length: 430
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 56

Conread position: 1-423
Cow position:
Alignm length: 429
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 17

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 150

Conread position: 1-423
Cow position:
Alignm length: 433
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 157

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 153

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 153

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 150

Conread position: 1-425
Cow position:
Alignm length: 428
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 96

Conread position: 2-423
Cow position:
Alignm length: 427
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 10

Conread position: 3-421
Cow position:
Alignm length: 425
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 148

Conread position: 3-423
Cow position:
Alignm length: 433
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 148

Conread position: 3-423
Cow position:
Alignm length: 427
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 149

Conread position: 3-423
Cow position:
Alignm length: 426
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 151

Conread position: 5-341
Cow position:
Alignm length: 339
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 141

Conread position: 5-386
Cow position:
Alignm length: 388
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 10

Conread position: 5-423
Cow position:
Alignm length: 426
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 147

Conread position: 6-423
Cow position:
Alignm length: 423
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 144

Conread position: 6-423
Cow position:
Alignm length: 419
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 141

Conread position: 8-244
Cow position:
Alignm length: 238
Alignm identity: 174
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 21, 139

Conread position: 10-423
Cow position:
Alignm length: 420
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 133

Conread position: 10-423
Cow position:
Alignm length: 416
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 88

Conread position: 12-144
Cow position:
Alignm length: 138
Alignm identity: 105
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 13-212
Cow position:
Alignm length: 205
Alignm identity: 148
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 20, 138

Conread position: 13-238
Cow position:
Alignm length: 231
Alignm identity: 170
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 22, 138

Conread position: 13-422
Cow position:
Alignm length: 424
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 59

Conread position: 13-422
Cow position:
Alignm length: 411
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 406, 22

Conread position: 13-423
Cow position:
Alignm length: 416
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 75

Conread position: 13-423
Cow position:
Alignm length: 417
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 138

Conread position: 13-423
Cow position:
Alignm length: 417
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 138

Conread position: 13-423
Cow position:
Alignm length: 416
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 138

Conread position: 13-423
Cow position:
Alignm length: 417
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 138

Conread position: 13-423
Cow position:
Alignm length: 416
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 138

Conread position: 13-423
Cow position:
Alignm length: 416
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 138

Conread position: 13-423
Cow position:
Alignm length: 416
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 140

Conread position: 14-421
Cow position:
Alignm length: 413
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 82

Conread position: 14-423
Cow position:
Alignm length: 416
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 140

Conread position: 16-383
Cow position:
Alignm length: 368
Alignm identity: 234
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 27-423
Cow position:
Alignm length: 402
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 115

Conread position: 28-423
Cow position:
Alignm length: 396
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 0

Conread position: 32-280
Cow position:
Alignm length: 252
Alignm identity: 192
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 227, 39

Conread position: 32-423
Cow position:
Alignm length: 392
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 35-392
Cow position:
Alignm length: 361
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 111

Conread position: 82-423
Cow position:
Alignm length: 342
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 87-423
Cow position:
Alignm length: 339
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 12

Conread position: 247-425
Cow position:
Alignm length: 180
Alignm identity: 126
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 86, 11

Conread position: 258-422
Cow position:
Alignm length: 165
Alignm identity: 116
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.