Cow genome map
| Conread name: | rtra32_o15.y1 |
| Conread position: | 1-205 |
| Cow position: | chr8:61034461-61034257 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 23, 149 |
| Conread position: | 1-217 |
| Cow position: | chr8:51667738-51667521 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 32, 150 |
| Conread position: | 1-313 |
| Cow position: | chr8:47885579-47885887 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 52 |
| Conread position: | 1-365 |
| Cow position: | chr8:58186658-58186297 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 74 |
| Conread position: | 1-373 |
| Cow position: | chr8:38390923-38391291 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 101 |
| Conread position: | 1-378 |
| Cow position: | chr8:44244017-44243640 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 150 |
| Conread position: | 1-380 |
| Cow position: | chr8:45160518-45160131 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 151 |
| Conread position: | 1-408 |
| Cow position: | chr8:24419650-24419263 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 151 |
| Conread position: | 1-421 |
| Cow position: | chr8:7161448-7161868 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 153 |
| Conread position: | 1-421 |
| Cow position: | chr8:25522956-25523378 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 149 |
| Conread position: | 1-422 |
| Cow position: | chr8:60060937-60061355 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 67 |
| Conread position: | 1-423 |
| Cow position: | chr8:2886301-2886721 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 96 |
| Conread position: | 1-423 |
| Cow position: | chr8:4686952-4687375 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 150 |
| Conread position: | 1-423 |
| Cow position: | chr8:5016738-5017152 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 153 |
| Conread position: | 1-423 |
| Cow position: | chr8:8518033-8517614 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 150 |
| Conread position: | 1-423 |
| Cow position: | chr8:8556598-8556175 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 151 |
| Conread position: | 1-423 |
| Cow position: | chr8:9735797-9736213 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 150 |
| Conread position: | 1-423 |
| Cow position: | chr8:10743074-10742643 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 150 |
| Conread position: | 1-423 |
| Cow position: | chr8:11802377-11802794 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 95 |
| Conread position: | 1-423 |
| Cow position: | chr8:11832254-11832682 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 207 |
| Conread position: | 1-423 |
| Cow position: | chr8:11969723-11969310 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 70 |
| Conread position: | 1-423 |
| Cow position: | chr8:17311576-17311996 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 150 |
| Conread position: | 1-423 |
| Cow position: | chr8:19051033-19051449 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 150 |
| Conread position: | 1-423 |
| Cow position: | chr8:19330292-19330714 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 150 |
| Conread position: | 1-423 |
| Cow position: | chr8:23771191-23771610 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 153 |
| Conread position: | 1-423 |
| Cow position: | chr8:24915785-24915363 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 153 |
| Conread position: | 1-423 |
| Cow position: | chr8:25776116-25775694 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 158 |
| Conread position: | 1-423 |
| Cow position: | chr8:27578952-27579369 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 34 |
| Conread position: | 1-423 |
| Cow position: | chr8:32318992-32318578 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 79 |
| Conread position: | 1-423 |
| Cow position: | chr8:32437530-32437112 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 83 |
| Conread position: | 1-423 |
| Cow position: | chr8:33588931-33589348 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 153 |
| Conread position: | 1-423 |
| Cow position: | chr8:37931641-37932063 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 150 |
| Conread position: | 1-423 |
| Cow position: | chr8:38606642-38606228 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 143 |
| Conread position: | 1-423 |
| Cow position: | chr8:39195660-39195235 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 155 |
| Conread position: | 1-423 |
| Cow position: | chr8:42160858-42160453 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 56 |
| Conread position: | 1-423 |
| Cow position: | chr8:42419879-42419464 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 17 |
| Conread position: | 1-423 |
| Cow position: | chr8:42484469-42484889 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 150 |
| Conread position: | 1-423 |
| Cow position: | chr8:46944362-46943935 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 157 |
| Conread position: | 1-423 |
| Cow position: | chr8:47661768-47661347 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 153 |
| Conread position: | 1-423 |
| Cow position: | chr8:50930574-50930157 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 153 |
| Conread position: | 1-423 |
| Cow position: | chr8:50994342-50994748 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 150 |
| Conread position: | 1-425 |
| Cow position: | chr8:14591345-14590927 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 96 |
| Conread position: | 2-423 |
| Cow position: | chr8:8911064-8911480 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 10 |
| Conread position: | 3-421 |
| Cow position: | chr8:12449506-12449924 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 148 |
| Conread position: | 3-423 |
| Cow position: | chr8:3856456-3856042 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 148 |
| Conread position: | 3-423 |
| Cow position: | chr8:25408282-25408703 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 149 |
| Conread position: | 3-423 |
| Cow position: | chr8:36635986-36635569 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 151 |
| Conread position: | 5-341 |
| Cow position: | chr8:41943986-41944320 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 141 |
| Conread position: | 5-386 |
| Cow position: | chr8:11821873-11822243 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 10 |
| Conread position: | 5-423 |
| Cow position: | chr8:2170818-2170400 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 147 |
| Conread position: | 6-423 |
| Cow position: | chr8:8401554-8401142 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 144 |
| Conread position: | 6-423 |
| Cow position: | chr8:14928319-14927906 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 141 |
| Conread position: | 8-244 |
| Cow position: | chr8:44694379-44694610 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 21, 139 |
| Conread position: | 10-423 |
| Cow position: | chr8:30487820-30487409 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 133 |
| Conread position: | 10-423 |
| Cow position: | chr8:30891752-30891343 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 88 |
| Conread position: | 12-144 |
| Cow position: | chr8:45692591-45692454 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 13-212 |
| Cow position: | chr8:8229212-8229013 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 20, 138 |
| Conread position: | 13-238 |
| Cow position: | chr8:45797753-45797527 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 22, 138 |
| Conread position: | 13-422 |
| Cow position: | chr8:10748926-10749336 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 59 |
| Conread position: | 13-422 |
| Cow position: | chr8:21158265-21157872 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 406, 22 |
| Conread position: | 13-423 |
| Cow position: | chr8:1153746-1153337 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 75 |
| Conread position: | 13-423 |
| Cow position: | chr8:1319606-1320015 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 138 |
| Conread position: | 13-423 |
| Cow position: | chr8:6065206-6064802 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 138 |
| Conread position: | 13-423 |
| Cow position: | chr8:6684009-6684419 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 138 |
| Conread position: | 13-423 |
| Cow position: | chr8:22571748-22571337 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 138 |
| Conread position: | 13-423 |
| Cow position: | chr8:32631465-32631055 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 138 |
| Conread position: | 13-423 |
| Cow position: | chr8:34348240-34348646 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 138 |
| Conread position: | 13-423 |
| Cow position: | chr8:47069244-47068834 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 140 |
| Conread position: | 14-421 |
| Cow position: | chr8:50288357-50287952 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 82 |
| Conread position: | 14-423 |
| Cow position: | chr8:49215004-49215414 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 140 |
| Conread position: | 16-383 |
| Cow position: | chr8:57019564-57019916 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 27-423 |
| Cow position: | chr8:8315868-8315488 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 115 |
| Conread position: | 28-423 |
| Cow position: | chr8:15711834-15711444 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 32-280 |
| Cow position: | chr8:41646133-41645891 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 192 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 227, 39 |
| Conread position: | 32-423 |
| Cow position: | chr8:11762531-11762912 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 35-392 |
| Cow position: | chr8:44074914-44074575 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 310, 111 |
| Conread position: | 82-423 |
| Cow position: | chr8:46050825-46051160 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 87-423 |
| Cow position: | chr8:25376404-25376733 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 311, 12 |
| Conread position: | 247-425 |
| Cow position: | chr8:9994172-9993997 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 86, 11 |
| Conread position: | 258-422 |
| Cow position: | chr8:49859954-49859790 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.