Cow genome map

Conread name: rtra32_o15.y1

Conread position: 1-193
Cow position:
Alignm length: 198
Alignm identity: 144
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 32, 150

Conread position: 1-195
Cow position:
Alignm length: 200
Alignm identity: 150
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 32, 150

Conread position: 1-206
Cow position:
Alignm length: 214
Alignm identity: 152
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 10, 112

Conread position: 1-237
Cow position:
Alignm length: 240
Alignm identity: 175
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 20, 148

Conread position: 1-272
Cow position:
Alignm length: 277
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-352
Cow position:
Alignm length: 359
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 151

Conread position: 1-353
Cow position:
Alignm length: 358
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-357
Cow position:
Alignm length: 362
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-373
Cow position:
Alignm length: 377
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 149

Conread position: 1-376
Cow position:
Alignm length: 384
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 152

Conread position: 1-386
Cow position:
Alignm length: 391
Alignm identity: 260
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 32, 89

Conread position: 1-406
Cow position:
Alignm length: 411
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-419
Cow position:
Alignm length: 432
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 145

Conread position: 1-419
Cow position:
Alignm length: 421
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 24

Conread position: 1-420
Cow position:
Alignm length: 435
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 160

Conread position: 1-421
Cow position:
Alignm length: 434
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 150

Conread position: 1-422
Cow position:
Alignm length: 428
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 142

Conread position: 1-422
Cow position:
Alignm length: 428
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 151

Conread position: 1-422
Cow position:
Alignm length: 427
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 74

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 431
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 73

Conread position: 1-423
Cow position:
Alignm length: 448
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 439
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 11

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 101

Conread position: 1-423
Cow position:
Alignm length: 423
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 153

Conread position: 1-423
Cow position:
Alignm length: 430
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 95

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 150

Conread position: 1-423
Cow position:
Alignm length: 425
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 92

Conread position: 1-423
Cow position:
Alignm length: 426
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 118

Conread position: 1-423
Cow position:
Alignm length: 429
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 429
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 431
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 151

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 80

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 153

Conread position: 1-423
Cow position:
Alignm length: 436
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 160

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 1-423
Cow position:
Alignm length: 428
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 97

Conread position: 1-423
Cow position:
Alignm length: 429
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 66

Conread position: 1-423
Cow position:
Alignm length: 429
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 92

Conread position: 1-425
Cow position:
Alignm length: 430
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 151

Conread position: 2-385
Cow position:
Alignm length: 387
Alignm identity: 260
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 34, 147

Conread position: 2-423
Cow position:
Alignm length: 427
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 79

Conread position: 4-373
Cow position:
Alignm length: 375
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 147

Conread position: 5-268
Cow position:
Alignm length: 265
Alignm identity: 195
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 29, 12

Conread position: 5-371
Cow position:
Alignm length: 367
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 0

Conread position: 6-423
Cow position:
Alignm length: 423
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 148

Conread position: 6-423
Cow position:
Alignm length: 419
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 116

Conread position: 10-423
Cow position:
Alignm length: 416
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 137

Conread position: 10-423
Cow position:
Alignm length: 415
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 140

Conread position: 12-423
Cow position:
Alignm length: 413
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 52

Conread position: 13-221
Cow position:
Alignm length: 214
Alignm identity: 160
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 20, 138

Conread position: 13-230
Cow position:
Alignm length: 223
Alignm identity: 167
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 20, 138

Conread position: 13-419
Cow position:
Alignm length: 413
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 138

Conread position: 13-422
Cow position:
Alignm length: 417
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 141

Conread position: 13-423
Cow position:
Alignm length: 416
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 57

Conread position: 13-423
Cow position:
Alignm length: 416
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 138

Conread position: 13-423
Cow position:
Alignm length: 417
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 138

Conread position: 13-423
Cow position:
Alignm length: 416
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 138

Conread position: 13-423
Cow position:
Alignm length: 416
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 44

Conread position: 13-423
Cow position:
Alignm length: 416
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 138

Conread position: 13-423
Cow position:
Alignm length: 416
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 138

Conread position: 14-423
Cow position:
Alignm length: 415
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 137

Conread position: 28-174
Cow position:
Alignm length: 147
Alignm identity: 109
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 118, 0

Conread position: 28-421
Cow position:
Alignm length: 394
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 0

Conread position: 28-421
Cow position:
Alignm length: 395
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 36

Conread position: 28-425
Cow position:
Alignm length: 399
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 370, 88

Conread position: 29-372
Cow position:
Alignm length: 345
Alignm identity: 227
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 204, 56

Conread position: 30-357
Cow position:
Alignm length: 328
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 0

Conread position: 51-423
Cow position:
Alignm length: 378
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 26

Conread position: 55-423
Cow position:
Alignm length: 371
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 29

Conread position: 82-423
Cow position:
Alignm length: 342
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 91-364
Cow position:
Alignm length: 274
Alignm identity: 186
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 106-417
Cow position:
Alignm length: 313
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 40

Conread position: 106-423
Cow position:
Alignm length: 319
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 42

Conread position: 225-425
Cow position:
Alignm length: 201
Alignm identity: 147
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 16, 0

Show alignments to all cow chromosomes.