Non-Coding RNA Search

Cow genome map


           Conread name:
           ruio02_f11.y1
        

               Conread position:
               1-190
               

               Cow position:
               chr24:38266864-38267051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               115, 157
               

               Conread position:
               1-202
               

               Cow position:
               chr24:16625824-16625625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               168
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               116, 30
               

               Conread position:
               1-210
               

               Cow position:
               chr24:37975393-37975190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               128, 37
               

               Conread position:
               1-218
               

               Cow position:
               chr24:28496911-28496694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               104, 39
               

               Conread position:
               1-224
               

               Cow position:
               chr24:34315036-34315249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               172
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               119, 30
               

               Conread position:
               1-231
               

               Cow position:
               chr24:18266495-18266264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               185
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               120, 30
               

               Conread position:
               1-231
               

               Cow position:
               chr24:36555151-36554934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               119, 30
               

               Conread position:
               1-317
               

               Cow position:
               chr24:18405627-18405302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               244
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               119, 37
               

               Conread position:
               1-328
               

               Cow position:
               chr24:37246541-37246204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               246
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               120, 41
               

               Conread position:
               1-395
               

               Cow position:
               chr24:24250401-24250808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 147
               

               Conread position:
               1-415
               

               Cow position:
               chr24:5754518-5754943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               302
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               172, 30
               

               Conread position:
               1-416
               

               Cow position:
               chr24:32205119-32204690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 50
               

               Conread position:
               1-420
               

               Cow position:
               chr24:201956-201523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 30
               

               Conread position:
               1-420
               

               Cow position:
               chr24:27290557-27290982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 21
               

               Conread position:
               1-420
               

               Cow position:
               chr24:39159867-39159439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 30
               

               Conread position:
               1-436
               

               Cow position:
               chr24:15508866-15508417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 78
               

               Conread position:
               1-450
               

               Cow position:
               chr24:19658224-19658676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               468
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 30
               

               Conread position:
               1-450
               

               Cow position:
               chr24:32054348-32054791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 30
               

               Conread position:
               1-457
               

               Cow position:
               chr24:5141611-5142086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               485
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 80
               

               Conread position:
               1-457
               

               Cow position:
               chr24:20225414-20225892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               489
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 30
               

               Conread position:
               1-457
               

               Cow position:
               chr24:26929272-26928796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               484
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 33
               

               Conread position:
               1-457
               

               Cow position:
               chr24:28553869-28553424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               474
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               179, 40
               

               Conread position:
               1-460
               

               Cow position:
               chr24:25320669-25321133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               478
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 21
               

               Conread position:
               1-460
               

               Cow position:
               chr24:33944070-33944554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               489
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 127
               

               Conread position:
               1-461
               

               Cow position:
               chr24:3493570-3494030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               478
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 41
               

               Conread position:
               1-461
               

               Cow position:
               chr24:7917692-7917230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               474
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 40
               

               Conread position:
               1-461
               

               Cow position:
               chr24:15692696-15693171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               486
               

               Alignm identity:
               317
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               78, 28
               

               Conread position:
               1-461
               

               Cow position:
               chr24:17407073-17407540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               484
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 21
               

               Conread position:
               1-461
               

               Cow position:
               chr24:18485323-18484844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               490
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 39
               

               Conread position:
               1-461
               

               Cow position:
               chr24:18734683-18734231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               475
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 30
               

               Conread position:
               1-461
               

               Cow position:
               chr24:27149084-27149531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               484
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 30
               

               Conread position:
               1-461
               

               Cow position:
               chr24:27267315-27267762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               480
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 21
               

               Conread position:
               1-461
               

               Cow position:
               chr24:27844843-27844384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               476
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 30
               

               Conread position:
               1-461
               

               Cow position:
               chr24:28303673-28303213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               473
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 36
               

               Conread position:
               1-461
               

               Cow position:
               chr24:30235555-30236021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               486
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 30
               

               Conread position:
               1-461
               

               Cow position:
               chr24:31811864-31812334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               488
               

               Alignm identity:
               327
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               119, 30
               

               Conread position:
               1-461
               

               Cow position:
               chr24:32609315-32609798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               491
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 30
               

               Conread position:
               1-461
               

               Cow position:
               chr24:33621809-33621329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               489
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 30
               

               Conread position:
               1-461
               

               Cow position:
               chr24:34272479-34272968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               499
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 30
               

               Conread position:
               1-461
               

               Cow position:
               chr24:36174106-36173630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               485
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 30
               

               Conread position:
               1-461
               

               Cow position:
               chr24:38347356-38347825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               478
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 30
               

               Conread position:
               1-461
               

               Cow position:
               chr24:44987697-44987223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               481
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 30
               

               Conread position:
               5-224
               

               Cow position:
               chr24:19466252-19466026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               117, 26
               

               Conread position:
               5-224
               

               Cow position:
               chr24:20970111-20969904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               115, 26
               

               Conread position:
               5-224
               

               Cow position:
               chr24:39219165-39218946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               117, 37
               

               Conread position:
               5-298
               

               Cow position:
               chr24:6340698-6340995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               223
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               115, 26
               

               Conread position:
               5-313
               

               Cow position:
               chr24:14279568-14279886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               233
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               66, 26
               

               Conread position:
               5-380
               

               Cow position:
               chr24:20024288-20024682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 26
               

               Conread position:
               5-391
               

               Cow position:
               chr24:28690375-28690766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 29
               

               Conread position:
               5-395
               

               Cow position:
               chr24:29679631-29679227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 26
               

               Conread position:
               5-459
               

               Cow position:
               chr24:29781843-29782311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               481
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 26
               

               Conread position:
               5-460
               

               Cow position:
               chr24:6071279-6071737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               470
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 17
               

               Conread position:
               5-460
               

               Cow position:
               chr24:29596130-29595652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               490
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 37
               

               Conread position:
               5-460
               

               Cow position:
               chr24:34532804-34533285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               490
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 27
               

               Conread position:
               5-460
               

               Cow position:
               chr24:43028651-43028180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               478
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 279
               

               Conread position:
               5-461
               

               Cow position:
               chr24:23556647-23556188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               477
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 9
               

               Conread position:
               5-461
               

               Cow position:
               chr24:27906109-27906587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               490
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 28
               

               Conread position:
               5-461
               

               Cow position:
               chr24:28721561-28722026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               484
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 93
               

               Conread position:
               6-461
               

               Cow position:
               chr24:27874284-27874722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               475
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 25
               

               Conread position:
               7-461
               

               Cow position:
               chr24:18741888-18741416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               481
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 35
               

               Conread position:
               13-243
               

               Cow position:
               chr24:45216430-45216199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               27, 66
               

               Conread position:
               13-399
               

               Cow position:
               chr24:43364044-43364448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 135
               

               Conread position:
               15-461
               

               Cow position:
               chr24:28062632-28063099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               480
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 27
               

               Conread position:
               19-401
               

               Cow position:
               chr24:31323979-31324376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               287
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               101, 12
               

               Conread position:
               22-436
               

               Cow position:
               chr24:34742439-34742880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 46
               

               Conread position:
               23-224
               

               Cow position:
               chr24:28600914-28600719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               15, 27
               

               Conread position:
               31-397
               

               Cow position:
               chr24:29388949-29389322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 34
               

               Conread position:
               32-241
               

               Cow position:
               chr24:34369304-34369096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               85, 48
               

               Conread position:
               33-329
               

               Cow position:
               chr24:591614-591921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               225
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               81, 13
               

               Conread position:
               35-456
               

               Cow position:
               chr24:28699762-28700192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 51
               

               Conread position:
               37-450
               

               Cow position:
               chr24:39440851-39440427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               42-424
               

               Cow position:
               chr24:14648623-14648244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 101
               

               Conread position:
               43-459
               

               Cow position:
               chr24:42862363-42862772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 78
               

               Conread position:
               46-219
               

               Cow position:
               chr24:20923313-20923477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               74, 30
               

               Conread position:
               46-224
               

               Cow position:
               chr24:37650386-37650565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               74, 149
               

               Conread position:
               46-231
               

               Cow position:
               chr24:40129841-40130028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               74, 31
               

               Conread position:
               46-306
               

               Cow position:
               chr24:14729125-14729400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               71, 30
               

               Conread position:
               46-307
               

               Cow position:
               chr24:42007462-42007738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               76, 30
               

               Conread position:
               46-353
               

               Cow position:
               chr24:34564844-34565163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               241
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               74, 31
               

               Conread position:
               46-389
               

               Cow position:
               chr24:27052776-27052418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 22
               

               Conread position:
               46-397
               

               Cow position:
               chr24:814549-814182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 306
               

               Conread position:
               46-415
               

               Cow position:
               chr24:8886632-8887014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 90
               

               Conread position:
               46-420
               

               Cow position:
               chr24:18331452-18331832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 75
               

               Conread position:
               46-421
               

               Cow position:
               chr24:18970776-18970395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 74
               

               Conread position:
               46-431
               

               Cow position:
               chr24:2108536-2108122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               279
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               77, 145
               

               Conread position:
               46-453
               

               Cow position:
               chr24:5652260-5651861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 30
               

               Conread position:
               46-457
               

               Cow position:
               chr24:17104851-17104424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 101
               

               Conread position:
               46-457
               

               Cow position:
               chr24:19535528-19535108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 43
               

               Conread position:
               46-457
               

               Cow position:
               chr24:31159344-31159775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 90
               

               Conread position:
               46-458
               

               Cow position:
               chr24:20942893-20943306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 40
               

               Conread position:
               46-461
               

               Cow position:
               chr24:2730854-2730478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               284
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               129, 74
               

               Conread position:
               46-461
               

               Cow position:
               chr24:6102549-6102976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 53
               

               Conread position:
               46-461
               

               Cow position:
               chr24:9222660-9222231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 154
               

               Conread position:
               46-461
               

               Cow position:
               chr24:13626005-13626435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 52
               

               Conread position:
               46-461
               

               Cow position:
               chr24:17309387-17308992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 58
               

               Conread position:
               46-461
               

               Cow position:
               chr24:38814687-38815123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 103
               

               Conread position:
               46-461
               

               Cow position:
               chr24:44041294-44040862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 101
               

               Conread position:
               47-224
               

               Cow position:
               chr24:27465855-27465682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               23, 90
               

               Conread position:
               47-365
               

               Cow position:
               chr24:3152859-3152522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               245
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               73, 29
               

               Conread position:
               47-372
               

               Cow position:
               chr24:43432519-43432853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               179, 29
               

               Conread position:
               47-400
               

               Cow position:
               chr24:16268386-16268038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 29
               

               Conread position:
               47-418
               

               Cow position:
               chr24:35150247-35150625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 32
               

               Conread position:
               47-418
               

               Cow position:
               chr24:43200557-43200167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 124
               

               Conread position:
               47-428
               

               Cow position:
               chr24:5683013-5683398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               260
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               29, 76
               

               Conread position:
               47-458
               

               Cow position:
               chr24:17860534-17860116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 94
               

               Conread position:
               47-458
               

               Cow position:
               chr24:20874393-20874826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 325
               

               Conread position:
               47-460
               

               Cow position:
               chr24:3165538-3165968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 214
               

               Conread position:
               47-461
               

               Cow position:
               chr24:25885441-25884999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               310
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               98, 75
               

               Conread position:
               47-461
               

               Cow position:
               chr24:27809898-27810298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 183
               

               Conread position:
               47-461
               

               Cow position:
               chr24:30229183-30229623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 118
               

               Conread position:
               47-461
               

               Cow position:
               chr24:30484226-30483795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 29
               

               Conread position:
               47-461
               

               Cow position:
               chr24:31816302-31816724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 379
               

               Conread position:
               47-461
               

               Cow position:
               chr24:40592438-40592862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               307
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               75, 34
               

               Conread position:
               48-224
               

               Cow position:
               chr24:38375003-38375180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               72, 33
               

               Conread position:
               48-233
               

               Cow position:
               chr24:27720034-27719852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               125, 28
               

               Conread position:
               48-316
               

               Cow position:
               chr24:40206794-40207057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               203
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               73, 158
               

               Conread position:
               48-372
               

               Cow position:
               chr24:25229339-25229001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               73, 28
               

               Conread position:
               48-453
               

               Cow position:
               chr24:17311491-17311083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 137
               

               Conread position:
               48-461
               

               Cow position:
               chr24:7913716-7914158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 206
               

               Conread position:
               48-461
               

               Cow position:
               chr24:24491296-24490876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 156
               

               Conread position:
               48-461
               

               Cow position:
               chr24:35986001-35985584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 74
               

               Conread position:
               49-420
               

               Cow position:
               chr24:19769217-19769606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 74
               

               Conread position:
               50-392
               

               Cow position:
               chr24:40849884-40850234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               261
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               70, 30
               

               Conread position:
               51-231
               

               Cow position:
               chr24:24137130-24136955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               125, 70
               

               Conread position:
               51-231
               

               Cow position:
               chr24:33098767-33098588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               69, 89
               

               Conread position:
               51-316
               

               Cow position:
               chr24:35795019-35794728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 192
               

               Conread position:
               51-382
               

               Cow position:
               chr24:43635156-43635500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               250
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               65, 25
               

               Conread position:
               51-396
               

               Cow position:
               chr24:29170686-29171048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 302
               

               Conread position:
               51-397
               

               Cow position:
               chr24:29673240-29673609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 345
               

               Conread position:
               51-427
               

               Cow position:
               chr24:38811720-38811353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 38
               

               Conread position:
               51-434
               

               Cow position:
               chr24:12851454-12851834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               278
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               69, 26
               

               Conread position:
               51-441
               

               Cow position:
               chr24:25424784-25425156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               277
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               69, 110
               

               Conread position:
               51-460
               

               Cow position:
               chr24:34761617-34762044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               287
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               72, 11
               

               Conread position:
               52-224
               

               Cow position:
               chr24:6956898-6957073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               25, 76
               

               Conread position:
               52-383
               

               Cow position:
               chr24:28600132-28599786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 76
               

               Conread position:
               53-223
               

               Cow position:
               chr24:27967803-27967972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               69, 95
               

               Conread position:
               53-372
               

               Cow position:
               chr24:30545133-30544803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               68, 113
               

               Conread position:
               53-385
               

               Cow position:
               chr24:36404424-36404067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               255
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               57, 32
               

               Conread position:
               53-440
               

               Cow position:
               chr24:1269527-1269905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 102
               

               Conread position:
               53-461
               

               Cow position:
               chr24:15288580-15288976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 146
               

               Conread position:
               53-461
               

               Cow position:
               chr24:17294464-17294046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 268
               

               Conread position:
               54-218
               

               Cow position:
               chr24:18324339-18324511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               55-452
               

               Cow position:
               chr24:27096410-27096834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 92
               

               Conread position:
               55-458
               

               Cow position:
               chr24:15861876-15861445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               55-459
               

               Cow position:
               chr24:43370973-43371390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               286
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               65, 113
               

               Conread position:
               56-421
               

               Cow position:
               chr24:18390562-18390189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 25
               

               Conread position:
               57-228
               

               Cow position:
               chr24:21860493-21860324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               65, 19
               

               Conread position:
               57-400
               

               Cow position:
               chr24:17955720-17955354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 5
               

               Conread position:
               58-457
               

               Cow position:
               chr24:41980934-41980515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 19
               

               Conread position:
               59-206
               

               Cow position:
               chr24:39483202-39483354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               61, 142
               

               Conread position:
               59-388
               

               Cow position:
               chr24:24755184-24755527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 18
               

               Conread position:
               60-461
               

               Cow position:
               chr24:16994624-16995027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 25
               

               Conread position:
               63-361
               

               Cow position:
               chr24:35467447-35467161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               8, 99
               

               Conread position:
               64-274
               

               Cow position:
               chr24:40055988-40055765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               53, 135
               

               Conread position:
               65-461
               

               Cow position:
               chr24:20801597-20801196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 53
               

               Conread position:
               66-461
               

               Cow position:
               chr24:18374510-18374913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 133
               

               Conread position:
               70-461
               

               Cow position:
               chr24:27608358-27607962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               286
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               40, 297
               

               Conread position:
               71-461
               

               Cow position:
               chr24:6450255-6450658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               282
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               49, 75
               

               Conread position:
               75-385
               

               Cow position:
               chr24:19261605-19261301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               219
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               45, 14
               

               Conread position:
               75-419
               

               Cow position:
               chr24:41068013-41068369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 198
               

               Conread position:
               79-459
               

               Cow position:
               chr24:17943416-17943030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               258
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               42, 268
               

               Conread position:
               80-397
               

               Cow position:
               chr24:27824214-27824550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               235
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               40, 55
               

               Conread position:
               80-460
               

               Cow position:
               chr24:33372300-33372694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               287
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               40, 200
               

               Conread position:
               80-461
               

               Cow position:
               chr24:22114489-22114878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               259
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               82-392
               

               Cow position:
               chr24:2096137-2095799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               246
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               83-459
               

               Cow position:
               chr24:10498963-10499365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               273
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               37, 245
               

               Conread position:
               87-461
               

               Cow position:
               chr24:7744491-7744870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               270
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               84, 36
               

               Conread position:
               88-461
               

               Cow position:
               chr24:37299078-37298693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               263
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               57, 112
               

               Conread position:
               89-397
               

               Cow position:
               chr24:34410416-34410729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               32, 51
               

               Conread position:
               94-461
               

               Cow position:
               chr24:25194030-25194415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 73
               

               Conread position:
               95-298
               

               Cow position:
               chr24:31382673-31382890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               25, 57
               

               Conread position:
               103-457
               

               Cow position:
               chr24:24457474-24457094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 94
               

               Conread position:
               104-418
               

               Cow position:
               chr24:28327309-28326973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               247
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               18, 54
               

               Conread position:
               106-461
               

               Cow position:
               chr24:21519215-21519579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 27
               

               Conread position:
               110-397
               

               Cow position:
               chr24:34396394-34396091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               11, 166
               

               Conread position:
               114-442
               

               Cow position:
               chr24:15347385-15347721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 13
               

               Conread position:
               119-460
               

               Cow position:
               chr24:29540121-29539782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               242
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               30, 79
               

               Conread position:
               121-461
               

               Cow position:
               chr24:352813-352455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 144
               

               Conread position:
               124-461
               

               Cow position:
               chr24:28990360-28990711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               259
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               23, 50
               

               Conread position:
               126-461
               

               Cow position:
               chr24:27299967-27300310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               26, 128
               

               Conread position:
               127-461
               

               Cow position:
               chr24:24531999-24532320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               244
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               43, 26
               

               Conread position:
               128-440
               

               Cow position:
               chr24:31359125-31359446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               45, 142
               

               Conread position:
               131-461
               

               Cow position:
               chr24:24155703-24155361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               242
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               45, 96
               

               Conread position:
               132-461
               

               Cow position:
               chr24:25756483-25756149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               241
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               48, 15
               

               Conread position:
               134-457
               

               Cow position:
               chr24:42226106-42226412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               37, 51
               

               Conread position:
               134-461
               

               Cow position:
               chr24:22079265-22079612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 215
               

               Conread position:
               134-461
               

               Cow position:
               chr24:44762604-44762268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               135-448
               

               Cow position:
               chr24:17833008-17832684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               238
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               38, 145
               

               Conread position:
               135-457
               

               Cow position:
               chr24:16089042-16089377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 59
               

               Conread position:
               135-461
               

               Cow position:
               chr24:22647536-22647187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 222
               

               Conread position:
               139-461
               

               Cow position:
               chr24:21606851-21606527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 115
               

               Conread position:
               139-461
               

               Cow position:
               chr24:42877060-42876751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               232
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               62, 116
               

               Conread position:
               142-460
               

               Cow position:
               chr24:41423422-41423744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               31, 52
               

               Conread position:
               143-450
               

               Cow position:
               chr24:41405731-41406041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 50
               

               Conread position:
               149-441
               

               Cow position:
               chr24:6912531-6912226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               221
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               24, 45
               

               Conread position:
               151-460
               

               Cow position:
               chr24:35365862-35365559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               221
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               29, 59
               

               Conread position:
               153-459
               

               Cow position:
               chr24:25092354-25092671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               223
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               20, 118
               

               Conread position:
               157-412
               

               Cow position:
               chr24:24061974-24061702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               20, 54
               

               Conread position:
               161-461
               

               Cow position:
               chr24:9036028-9036337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               12, 266
               

               Conread position:
               164-452
               

               Cow position:
               chr24:39627701-39628018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               217
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               11, 307
               

               Conread position:
               174-461
               

               Cow position:
               chr24:19186808-19187081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               52, 19
               

               Conread position:
               182-450
               

               Cow position:
               chr24:16895258-16895009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               198
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               37, 70
               

               Conread position:
               183-368
               

               Cow position:
               chr24:6957377-6957555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               36, 24
               

               Conread position:
               184-450
               

               Cow position:
               chr24:3656493-3656225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               186
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               14, 62
               

               Conread position:
               184-461
               

               Cow position:
               chr24:10125741-10126029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               223
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               13, 240
               

               Conread position:
               185-448
               

               Cow position:
               chr24:10299957-10300216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 19
               

               Conread position:
               186-421
               

               Cow position:
               chr24:39791413-39791650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               9, 221
               

               Conread position:
               187-453
               

               Cow position:
               chr24:27201967-27202226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               195
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               19, 74
               

               Conread position:
               189-397
               

               Cow position:
               chr24:27900606-27900815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               9, 167
               

               Conread position:
               190-461
               

               Cow position:
               chr24:26880628-26880904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               200
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               48, 12
               

               Conread position:
               190-461
               

               Cow position:
               chr24:27039926-27040199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 93
               

               Conread position:
               191-408
               

               Cow position:
               chr24:18614882-18615099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               28, 8
               

               Conread position:
               193-453
               

               Cow position:
               chr24:19474782-19474521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               26, 14
               

               Conread position:
               193-461
               

               Cow position:
               chr24:19800729-19800988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 60
               

               Conread position:
               196-407
               

               Cow position:
               chr24:34496004-34496222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               198-342
               

               Cow position:
               chr24:25752302-25752150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               198-461
               

               Cow position:
               chr24:18137411-18137151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               106, 28
               

               Conread position:
               199-459
               

               Cow position:
               chr24:29260089-29260333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               54, 28
               

               Conread position:
               204-362
               

               Cow position:
               chr24:40837671-40837825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               15, 57
               

               Conread position:
               204-425
               

               Cow position:
               chr24:18017122-18017343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               16, 55
               

               Conread position:
               204-453
               

               Cow position:
               chr24:12200518-12200266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               188
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               18, 241
               

               Conread position:
               204-454
               

               Cow position:
               chr24:26554704-26554452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               183
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               204-458
               

               Cow position:
               chr24:39523553-39523304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 48
               

               Conread position:
               204-459
               

               Cow position:
               chr24:16509865-16510119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 55
               

               Conread position:
               204-460
               

               Cow position:
               chr24:16645429-16645170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 202
               

               Conread position:
               204-461
               

               Cow position:
               chr24:11840083-11840333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 50
               

               Conread position:
               204-461
               

               Cow position:
               chr24:20594432-20594697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               18, 196
               

               Conread position:
               204-461
               

               Cow position:
               chr24:35631881-35632130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 44
               

               Conread position:
               207-461
               

               Cow position:
               chr24:42984291-42984544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               186
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               184, 31
               

               Conread position:
               209-397
               

               Cow position:
               chr24:32194408-32194596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               11, 161
               

               Conread position:
               209-461
               

               Cow position:
               chr24:2992978-2992731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               211-390
               

               Cow position:
               chr24:7046846-7046669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               211-400
               

               Cow position:
               chr24:28289348-28289163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               8, 39
               

               Conread position:
               212-452
               

               Cow position:
               chr24:35576631-35576395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 44
               

               Conread position:
               212-461
               

               Cow position:
               chr24:7476450-7476201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 50
               

               Conread position:
               213-453
               

               Cow position:
               chr24:37395306-37395066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               181
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               6, 39
               

               Conread position:
               215-440
               

               Cow position:
               chr24:6151700-6151915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               215-461
               

               Cow position:
               chr24:11028780-11028538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 62
               

               Conread position:
               216-461
               

               Cow position:
               chr24:37267568-37267814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               45, 29
               

               Conread position:
               218-388
               

               Cow position:
               chr24:28045660-28045838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               218-440
               

               Cow position:
               chr24:13948030-13948252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               37, 110
               

               Conread position:
               218-458
               

               Cow position:
               chr24:38006797-38006566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               188
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               198, 15
               

               Conread position:
               218-460
               

               Cow position:
               chr24:27713498-27713262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               34, 186
               

               Conread position:
               218-460
               

               Cow position:
               chr24:27958567-27958319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               218-460
               

               Cow position:
               chr24:37823437-37823672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               218-461
               

               Cow position:
               chr24:184699-184460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               82, 33
               

               Conread position:
               218-461
               

               Cow position:
               chr24:10031496-10031723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               46, 26
               

               Conread position:
               218-461
               

               Cow position:
               chr24:18755665-18755909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               87, 14
               

               Conread position:
               218-461
               

               Cow position:
               chr24:32739362-32739114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               36, 76
               

               Conread position:
               218-461
               

               Cow position:
               chr24:33098576-33098323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               40, 198
               

               Conread position:
               218-461
               

               Cow position:
               chr24:40537423-40537183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               74, 13
               

               Conread position:
               219-460
               

               Cow position:
               chr24:13808652-13808415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               106, 25
               

               Conread position:
               220-381
               

               Cow position:
               chr24:3160746-3160903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               220-461
               

               Cow position:
               chr24:27284731-27284973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               32, 82
               

               Conread position:
               221-374
               

               Cow position:
               chr24:21894964-21895114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               221-397
               

               Cow position:
               chr24:27418189-27418016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               34, 94
               

               Conread position:
               221-409
               

               Cow position:
               chr24:4724887-4725069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               175, 23
               

               Conread position:
               221-421
               

               Cow position:
               chr24:40389519-40389717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               36, 140
               

               Conread position:
               221-425
               

               Cow position:
               chr24:18368757-18368559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               179, 37
               

               Conread position:
               221-452
               

               Cow position:
               chr24:4599625-4599851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               40, 24
               

               Conread position:
               221-453
               

               Cow position:
               chr24:10242871-10242639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               172
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               24, 44
               

               Conread position:
               221-457
               

               Cow position:
               chr24:20588083-20588318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               79, 34
               

               Conread position:
               221-457
               

               Cow position:
               chr24:28600527-28600290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               187
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               38, 184
               

               Conread position:
               221-458
               

               Cow position:
               chr24:19466009-19465769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               181
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               23, 171
               

               Conread position:
               221-460
               

               Cow position:
               chr24:880541-880769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               31, 83
               

               Conread position:
               221-460
               

               Cow position:
               chr24:20733932-20734193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               40, 77
               

               Conread position:
               221-460
               

               Cow position:
               chr24:22689669-22689425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               83, 37
               

               Conread position:
               221-461
               

               Cow position:
               chr24:2359264-2359036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               110, 34
               

               Conread position:
               221-461
               

               Cow position:
               chr24:17285082-17284834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               221-461
               

               Cow position:
               chr24:18281722-18281486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               74, 109
               

               Conread position:
               221-461
               

               Cow position:
               chr24:19179527-19179287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               40, 24
               

               Conread position:
               221-461
               

               Cow position:
               chr24:22511468-22511710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               221-461
               

               Cow position:
               chr24:23575245-23575010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               54, 23
               

               Conread position:
               221-461
               

               Cow position:
               chr24:27630315-27630548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               221-461
               

               Cow position:
               chr24:29561664-29561430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               47, 184
               

               Conread position:
               221-461
               

               Cow position:
               chr24:39911125-39910882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 161
               

               Conread position:
               221-461
               

               Cow position:
               chr24:41001171-41001415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               78, 40
               

               Conread position:
               222-458
               

               Cow position:
               chr24:38478475-38478249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               57, 23
               

               Conread position:
               222-459
               

               Cow position:
               chr24:17752200-17751961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 44
               

               Conread position:
               222-461
               

               Cow position:
               chr24:19623771-19624014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               189
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               39, 22
               

               Conread position:
               222-461
               

               Cow position:
               chr24:19637497-19637735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               188
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               129, 38
               

               Conread position:
               223-458
               

               Cow position:
               chr24:7777705-7777488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               156, 28
               

               Conread position:
               223-460
               

               Cow position:
               chr24:18999963-19000191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 28
               

               Conread position:
               223-461
               

               Cow position:
               chr24:42103289-42103510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               193, 22
               

               Conread position:
               224-380
               

               Cow position:
               chr24:19291-19123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               224-458
               

               Cow position:
               chr24:29586906-29587146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 175
               

               Conread position:
               225-461
               

               Cow position:
               chr24:230192-230429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               27, 185
               

               Conread position:
               226-452
               

               Cow position:
               chr24:2694006-2693779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               226-461
               

               Cow position:
               chr24:3464538-3464298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               175
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               36, 29
               

               Conread position:
               226-461
               

               Cow position:
               chr24:37975066-37974834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               30, 158
               

               Conread position:
               227-358
               

               Cow position:
               chr24:40824004-40824131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               104
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               228-458
               

               Cow position:
               chr24:10536272-10536501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               24, 171
               

               Conread position:
               228-461
               

               Cow position:
               chr24:13587069-13586842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 23
               

               Conread position:
               228-461
               

               Cow position:
               chr24:18810762-18810983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               180
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               29, 66
               

               Conread position:
               228-461
               

               Cow position:
               chr24:28342271-28342510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               229-460
               

               Cow position:
               chr24:27220168-27219940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               101, 29
               

               Conread position:
               230-461
               

               Cow position:
               chr24:18474808-18474580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               25, 15
               

               Conread position:
               230-461
               

               Cow position:
               chr24:25263818-25263587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               32, 15
               

               Conread position:
               242-461
               

               Cow position:
               chr24:8676755-8676974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               166
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               16, 166
               

               Conread position:
               243-358
               

               Cow position:
               chr24:27511756-27511872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               98
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               50, 104
               

               Conread position:
               244-461
               

               Cow position:
               chr24:7846763-7846547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               31, 54
               

               Conread position:
               244-461
               

               Cow position:
               chr24:15585007-15584792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               164, 7
               

               Conread position:
               245-453
               

               Cow position:
               chr24:28470745-28470524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               245-461
               

               Cow position:
               chr24:153455-153232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               97, 13
               

               Conread position:
               247-461
               

               Cow position:
               chr24:42903746-42903960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               19, 100
               

               Conread position:
               251-421
               

               Cow position:
               chr24:7390391-7390225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               135
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               252-390
               

               Cow position:
               chr24:23667175-23667041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               106
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               252-415
               

               Cow position:
               chr24:20969720-20969559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               12, 63
               

               Conread position:
               252-453
               

               Cow position:
               chr24:26001330-26001530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               161
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               252-461
               

               Cow position:
               chr24:5360660-5360860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               17, 70
               

               Conread position:
               252-461
               

               Cow position:
               chr24:6742163-6742374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               165
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               252-461
               

               Cow position:
               chr24:18344006-18344215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               252-461
               

               Cow position:
               chr24:28233988-28234190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               201, 62
               

               Conread position:
               252-461
               

               Cow position:
               chr24:30314083-30313880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               128, 112
               

               Conread position:
               252-461
               

               Cow position:
               chr24:36036111-36035902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               143, 69
               

               Conread position:
               254-453
               

               Cow position:
               chr24:37651670-37651861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               254-459
               

               Cow position:
               chr24:41916198-41916404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               52, 154
               

               Conread position:
               254-460
               

               Cow position:
               chr24:2703666-2703462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               255-453
               

               Cow position:
               chr24:40404862-40404654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               149, 64
               

               Conread position:
               255-455
               

               Cow position:
               chr24:30038817-30039017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               255-458
               

               Cow position:
               chr24:14989146-14989348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               255-459
               

               Cow position:
               chr24:34896752-34896554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               255-460
               

               Cow position:
               chr24:24757194-24757398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               20, 91
               

               Conread position:
               255-460
               

               Cow position:
               chr24:42364181-42364384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               255-461
               

               Cow position:
               chr24:6008231-6008021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               31, 112
               

               Conread position:
               255-461
               

               Cow position:
               chr24:15353388-15353593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               255-461
               

               Cow position:
               chr24:23863683-23863477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               9, 16
               

               Conread position:
               256-457
               

               Cow position:
               chr24:43220125-43219931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               256-461
               

               Cow position:
               chr24:19730725-19730931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               257-460
               

               Cow position:
               chr24:32191007-32191206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               258-457
               

               Cow position:
               chr24:390053-390245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               159
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               258-461
               

               Cow position:
               chr24:18750653-18750859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 29
               

               Conread position:
               258-461
               

               Cow position:
               chr24:25122293-25122486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               259-386
               

               Cow position:
               chr24:29538561-29538429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               259-461
               

               Cow position:
               chr24:11036885-11036689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               260-461
               

               Cow position:
               chr24:28510748-28510940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               114, 91
               

               Conread position:
               261-461
               

               Cow position:
               chr24:6159689-6159494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               36, 18
               

               Conread position:
               263-453
               

               Cow position:
               chr24:42726404-42726601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               264-461
               

               Cow position:
               chr24:18021320-18021120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               265-461
               

               Cow position:
               chr24:34465550-34465344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               266-452
               

               Cow position:
               chr24:19966119-19965935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               266-461
               

               Cow position:
               chr24:2261624-2261819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               266-461
               

               Cow position:
               chr24:22194371-22194563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               55, 115
               

               Conread position:
               270-457
               

               Cow position:
               chr24:18668539-18668728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               153, 64
               

               Conread position:
               271-459
               

               Cow position:
               chr24:35310683-35310873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               33, 123
               

               Conread position:
               272-400
               

               Cow position:
               chr24:131335-131209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               103
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               8, 68
               

               Conread position:
               272-452
               

               Cow position:
               chr24:5447305-5447125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               127
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               272-452
               

               Cow position:
               chr24:15052759-15052579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               126, 131
               

               Conread position:
               272-458
               

               Cow position:
               chr24:8392829-8393015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               272-459
               

               Cow position:
               chr24:39143575-39143759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               272-461
               

               Cow position:
               chr24:7288137-7288324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               272-461
               

               Cow position:
               chr24:10294427-10294239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               176, 0
               

               Conread position:
               272-461
               

               Cow position:
               chr24:18730307-18730496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               272-461
               

               Cow position:
               chr24:34079376-34079189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               273-429
               

               Cow position:
               chr24:5143996-5143836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               273-458
               

               Cow position:
               chr24:32891080-32890901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               150
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               275-452
               

               Cow position:
               chr24:19598871-19599048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               275-460
               

               Cow position:
               chr24:22567069-22567254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               65, 53
               

               Conread position:
               276-461
               

               Cow position:
               chr24:263248-263433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               37, 128
               

               Conread position:
               276-461
               

               Cow position:
               chr24:3176695-3176511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               276-461
               

               Cow position:
               chr24:7757739-7757918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               276-461
               

               Cow position:
               chr24:32230541-32230355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               33, 151
               

               Conread position:
               277-457
               

               Cow position:
               chr24:17689643-17689463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               146
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               126, 101
               

               Conread position:
               277-461
               

               Cow position:
               chr24:8603020-8602839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               278-460
               

               Cow position:
               chr24:41566126-41565952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               278-461
               

               Cow position:
               chr24:6901111-6901293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               278-461
               

               Cow position:
               chr24:36286538-36286717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               279-461
               

               Cow position:
               chr24:5152493-5152675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               153
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               279-461
               

               Cow position:
               chr24:6740198-6740026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               279-461
               

               Cow position:
               chr24:11836434-11836252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               280-450
               

               Cow position:
               chr24:32979197-32979033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               280-461
               

               Cow position:
               chr24:27066201-27066379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               147
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               282-461
               

               Cow position:
               chr24:14256757-14256572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               282-461
               

               Cow position:
               chr24:18874848-18874671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               149
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               282-461
               

               Cow position:
               chr24:43499630-43499809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               10, 133
               

               Conread position:
               284-461
               

               Cow position:
               chr24:12120871-12121048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               284-461
               

               Cow position:
               chr24:18401341-18401168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               285-456
               

               Cow position:
               chr24:29677940-29677766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               143
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               285-458
               

               Cow position:
               chr24:20674952-20674778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               285-459
               

               Cow position:
               chr24:34302060-34301889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               285-461
               

               Cow position:
               chr24:26695972-26695796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               286-457
               

               Cow position:
               chr24:22419937-22420108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               286-459
               

               Cow position:
               chr24:5632444-5632269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               126, 50
               

               Conread position:
               286-460
               

               Cow position:
               chr24:19793408-19793233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               287-461
               

               Cow position:
               chr24:6515454-6515282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               287-461
               

               Cow position:
               chr24:16640887-16641062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               287-461
               

               Cow position:
               chr24:39304943-39304762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               287-461
               

               Cow position:
               chr24:44896017-44896190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               288-449
               

               Cow position:
               chr24:31383099-31383249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               288-460
               

               Cow position:
               chr24:34508797-34508968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               288-461
               

               Cow position:
               chr24:18405300-18405130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               288-461
               

               Cow position:
               chr24:33238286-33238105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               289-461
               

               Cow position:
               chr24:161983-162155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               144
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               289-461
               

               Cow position:
               chr24:27270906-27271078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               289-461
               

               Cow position:
               chr24:39904024-39903859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               290-433
               

               Cow position:
               chr24:28024260-28024399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               290-453
               

               Cow position:
               chr24:35405392-35405225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               123
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               290-457
               

               Cow position:
               chr24:40055530-40055364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               290-461
               

               Cow position:
               chr24:42194759-42194596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               291-421
               

               Cow position:
               chr24:22235449-22235579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               291-449
               

               Cow position:
               chr24:40025396-40025239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               9, 77
               

               Conread position:
               291-457
               

               Cow position:
               chr24:43373046-43373207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               291-461
               

               Cow position:
               chr24:11692485-11692654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               291-461
               

               Cow position:
               chr24:21715369-21715200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               292-461
               

               Cow position:
               chr24:9300611-9300779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               108, 15
               

               Conread position:
               292-461
               

               Cow position:
               chr24:41604646-41604477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               293-418
               

               Cow position:
               chr24:3631661-3631786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               293-461
               

               Cow position:
               chr24:7113206-7113382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               294-398
               

               Cow position:
               chr24:32818315-32818214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               87
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               294-461
               

               Cow position:
               chr24:3542284-3542451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               295-414
               

               Cow position:
               chr24:29013952-29014071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               99
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               295-461
               

               Cow position:
               chr24:15668405-15668571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               295-461
               

               Cow position:
               chr24:18695865-18696031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               106, 25
               

               Conread position:
               295-461
               

               Cow position:
               chr24:22888032-22887865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               111, 55
               

               Conread position:
               295-461
               

               Cow position:
               chr24:44776191-44776025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               296-435
               

               Cow position:
               chr24:35250125-35249986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               296-461
               

               Cow position:
               chr24:4635181-4635016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               296-461
               

               Cow position:
               chr24:34595742-34595577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               296-461
               

               Cow position:
               chr24:42008009-42008168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               297-461
               

               Cow position:
               chr24:13849152-13849313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               297-461
               

               Cow position:
               chr24:19768853-19769020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               298-456
               

               Cow position:
               chr24:10437811-10437969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               100, 80
               

               Conread position:
               298-461
               

               Cow position:
               chr24:10289345-10289185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               20, 123
               

               Conread position:
               298-461
               

               Cow position:
               chr24:29648279-29648113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               299-418
               

               Cow position:
               chr24:256016-256135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               299-461
               

               Cow position:
               chr24:20323512-20323349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               299-461
               

               Cow position:
               chr24:26569447-26569608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               78, 103
               

               Conread position:
               300-461
               

               Cow position:
               chr24:15557351-15557195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               300-461
               

               Cow position:
               chr24:24165532-24165694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               94, 104
               

               Conread position:
               300-461
               

               Cow position:
               chr24:25971083-25970935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               303-441
               

               Cow position:
               chr24:45147452-45147314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               101
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               303-450
               

               Cow position:
               chr24:39218558-39218405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               303-461
               

               Cow position:
               chr24:11736078-11735921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               8, 92
               

               Conread position:
               303-461
               

               Cow position:
               chr24:15448457-15448614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               303-461
               

               Cow position:
               chr24:18702391-18702549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               9, 78
               

               Conread position:
               303-461
               

               Cow position:
               chr24:23046904-23046746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               303-461
               

               Cow position:
               chr24:25142603-25142766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               303-461
               

               Cow position:
               chr24:36010414-36010575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               120, 52
               

               Conread position:
               303-461
               

               Cow position:
               chr24:36554704-36554552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               303-461
               

               Cow position:
               chr24:37252151-37252306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               73, 103
               

               Conread position:
               303-461
               

               Cow position:
               chr24:39760017-39760176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               304-458
               

               Cow position:
               chr24:20017433-20017279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               305-453
               

               Cow position:
               chr24:26612088-26611942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               305-461
               

               Cow position:
               chr24:11921915-11921759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               306-453
               

               Cow position:
               chr24:41301667-41301523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               306-461
               

               Cow position:
               chr24:18541453-18541308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               307-461
               

               Cow position:
               chr24:11155668-11155514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               308-460
               

               Cow position:
               chr24:22221376-22221528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               113
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               308-461
               

               Cow position:
               chr24:250539-250386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               308-461
               

               Cow position:
               chr24:20791876-20791723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               309-461
               

               Cow position:
               chr24:6265348-6265196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               310-461
               

               Cow position:
               chr24:885441-885296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               310-461
               

               Cow position:
               chr24:17060212-17060069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               311-460
               

               Cow position:
               chr24:26808592-26808739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               11, 84
               

               Conread position:
               312-458
               

               Cow position:
               chr24:34006206-34006061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               313-461
               

               Cow position:
               chr24:18268728-18268876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               313-461
               

               Cow position:
               chr24:25947858-25947710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               314-461
               

               Cow position:
               chr24:24091335-24091185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               315-450
               

               Cow position:
               chr24:15340449-15340318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               316-457
               

               Cow position:
               chr24:43027220-43027076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               319-450
               

               Cow position:
               chr24:34768558-34768429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               100
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               320-421
               

               Cow position:
               chr24:10840909-10840808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               84
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               320-459
               

               Cow position:
               chr24:26588231-26588365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               321-450
               

               Cow position:
               chr24:10309652-10309782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               98
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               321-454
               

               Cow position:
               chr24:3148224-3148092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               48, 109
               

               Conread position:
               321-461
               

               Cow position:
               chr24:14373570-14373429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               91, 73
               

               Conread position:
               321-461
               

               Cow position:
               chr24:15473537-15473678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               20, 81
               

               Conread position:
               321-461
               

               Cow position:
               chr24:39488356-39488497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               17, 9
               

               Conread position:
               322-461
               

               Cow position:
               chr24:11035493-11035364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               324-450
               

               Cow position:
               chr24:40578193-40578319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               98
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               326-461
               

               Cow position:
               chr24:27719510-27719381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               328-452
               

               Cow position:
               chr24:43445995-43445873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               331-461
               

               Cow position:
               chr24:38428091-38427961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               332-461
               

               Cow position:
               chr24:17178626-17178755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               332-461
               

               Cow position:
               chr24:22641112-22641241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               332-461
               

               Cow position:
               chr24:38693856-38693728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               333-460
               

               Cow position:
               chr24:3193249-3193123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               334-450
               

               Cow position:
               chr24:27791710-27791600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               339-457
               

               Cow position:
               chr24:18817416-18817534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               343-461
               

               Cow position:
               chr24:124593-124711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               348-461
               

               Cow position:
               chr24:35660167-35660280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               352-457
               

               Cow position:
               chr24:11874991-11875095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               86
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               353-461
               

               Cow position:
               chr24:35210098-35210207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               91
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               355-458
               

               Cow position:
               chr24:21196703-21196600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               84
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.
Conread position:	1-190
Cow position:	chr24:38266864-38267051 (view UCSC Genome Browser custom track)
Alignm length:	191
Alignm identity:	130
Alignm E-value:	6e-21
Alignm gaps (pig, cow):	115, 157
Conread position:	1-202
Cow position:	chr24:16625824-16625625 (view UCSC Genome Browser custom track)
Alignm length:	206
Alignm identity:	168
Alignm E-value:	8.40779e-45
Alignm gaps (pig, cow):	116, 30
Conread position:	1-210
Cow position:	chr24:37975393-37975190 (view UCSC Genome Browser custom track)
Alignm length:	213
Alignm identity:	157
Alignm E-value:	5e-30
Alignm gaps (pig, cow):	128, 37
Conread position:	1-218
Cow position:	chr24:28496911-28496694 (view UCSC Genome Browser custom track)
Alignm length:	227
Alignm identity:	165
Alignm E-value:	1e-27
Alignm gaps (pig, cow):	104, 39
Conread position:	1-224
Cow position:	chr24:34315036-34315249 (view UCSC Genome Browser custom track)
Alignm length:	227
Alignm identity:	172
Alignm E-value:	9e-36
Alignm gaps (pig, cow):	119, 30
Conread position:	1-231
Cow position:	chr24:18266495-18266264 (view UCSC Genome Browser custom track)
Alignm length:	239
Alignm identity:	185
Alignm E-value:	6.00036e-42
Alignm gaps (pig, cow):	120, 30
Conread position:	1-317
Cow position:	chr24:18405627-18405302 (view UCSC Genome Browser custom track)
Alignm length:	338
Alignm identity:	244
Alignm E-value:	4e-39
Alignm gaps (pig, cow):	119, 37
Conread position:	1-328
Cow position:	chr24:37246541-37246204 (view UCSC Genome Browser custom track)
Alignm length:	346
Alignm identity:	246
Alignm E-value:	5.99756e-43
Alignm gaps (pig, cow):	120, 41
Conread position:	1-395
Cow position:	chr24:24250401-24250808 (view UCSC Genome Browser custom track)
Alignm length:	415
Alignm identity:	287
Alignm E-value:	0
Alignm gaps (pig, cow):	51, 147
Conread position:	1-415
Cow position:	chr24:5754518-5754943 (view UCSC Genome Browser custom track)
Alignm length:	437
Alignm identity:	302
Alignm E-value:	1.96182e-44
Alignm gaps (pig, cow):	172, 30
Conread position:	1-416
Cow position:	chr24:32205119-32204690 (view UCSC Genome Browser custom track)
Alignm length:	438
Alignm identity:	315
Alignm E-value:	0
Alignm gaps (pig, cow):	39, 50
Conread position:	1-420
Cow position:	chr24:201956-201523 (view UCSC Genome Browser custom track)
Alignm length:	446
Alignm identity:	311
Alignm E-value:	0
Alignm gaps (pig, cow):	119, 30
Conread position:	1-436
Cow position:	chr24:15508866-15508417 (view UCSC Genome Browser custom track)
Alignm length:	464
Alignm identity:	332
Alignm E-value:	0
Alignm gaps (pig, cow):	43, 78
Conread position:	1-450
Cow position:	chr24:19658224-19658676 (view UCSC Genome Browser custom track)
Alignm length:	468
Alignm identity:	338
Alignm E-value:	0
Alignm gaps (pig, cow):	60, 30
Conread position:	1-457
Cow position:	chr24:5141611-5142086 (view UCSC Genome Browser custom track)
Alignm length:	485
Alignm identity:	331
Alignm E-value:	0
Alignm gaps (pig, cow):	43, 80
Conread position:	1-460
Cow position:	chr24:25320669-25321133 (view UCSC Genome Browser custom track)
Alignm length:	478
Alignm identity:	341
Alignm E-value:	0
Alignm gaps (pig, cow):	120, 21
Conread position:	1-461
Cow position:	chr24:3493570-3494030 (view UCSC Genome Browser custom track)
Alignm length:	478
Alignm identity:	362
Alignm E-value:	0
Alignm gaps (pig, cow):	119, 41
Conread position:	5-224
Cow position:	chr24:19466252-19466026 (view UCSC Genome Browser custom track)
Alignm length:	234
Alignm identity:	180
Alignm E-value:	1e-36
Alignm gaps (pig, cow):	117, 26
Conread position:	5-298
Cow position:	chr24:6340698-6340995 (view UCSC Genome Browser custom track)
Alignm length:	308
Alignm identity:	223
Alignm E-value:	4e-38
Alignm gaps (pig, cow):	115, 26
Conread position:	5-313
Cow position:	chr24:14279568-14279886 (view UCSC Genome Browser custom track)
Alignm length:	325
Alignm identity:	233
Alignm E-value:	1.99993e-41
Alignm gaps (pig, cow):	66, 26