Cow genome map

Conread name: ruio02_f11.y1

Conread position: 1-215
Cow position: chr6:33460829-33461035 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 149
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 118, 30

Conread position: 1-224
Cow position: chr6:10649277-10649065 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 168
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 39, 0

Conread position: 1-224
Cow position: chr6:46205759-46205974 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 172
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 111, 30

Conread position: 1-224
Cow position: chr6:50746718-50746946 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 30

Conread position: 1-231
Cow position: chr6:32210887-32210663 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 172
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 119, 36

Conread position: 1-231
Cow position: chr6:36928394-36928620 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 170
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 119, 28

Conread position: 1-231
Cow position: chr6:47540267-47540496 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 187
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 122, 39

Conread position: 1-233
Cow position: chr6:34075768-34075994 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 182
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 116, 21

Conread position: 1-302
Cow position: chr6:5958275-5957971 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 30

Conread position: 1-306
Cow position: chr6:16410937-16411252 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 234
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 119, 30

Conread position: 1-312
Cow position: chr6:38233725-38234026 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 216
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 206, 61

Conread position: 1-314
Cow position: chr6:24652439-24652125 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 243
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 84, 30

Conread position: 1-318
Cow position: chr6:50446018-50445695 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 249
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 119, 30

Conread position: 1-332
Cow position: chr6:17248473-17248806 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 239
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 71, 60

Conread position: 1-337
Cow position: chr6:11192711-11192372 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 228
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 119, 30

Conread position: 1-337
Cow position: chr6:25784054-25784404 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 239
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 120, 40

Conread position: 1-342
Cow position: chr6:62925252-62924899 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 40

Conread position: 1-349
Cow position: chr6:59597398-59597751 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 33

Conread position: 1-365
Cow position: chr6:34549150-34549521 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 252
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 115, 70

Conread position: 1-372
Cow position: chr6:31635946-31635557 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 45

Conread position: 1-390
Cow position: chr6:12551009-12551415 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 285
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 136, 41

Conread position: 1-395
Cow position: chr6:36470824-36470412 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 21

Conread position: 1-395
Cow position: chr6:57164168-57164575 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 33

Conread position: 1-397
Cow position: chr6:12500598-12501001 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 39

Conread position: 1-397
Cow position: chr6:16706751-16707164 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 26

Conread position: 1-397
Cow position: chr6:24004288-24004688 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 76

Conread position: 1-397
Cow position: chr6:67214483-67214901 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 294
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 121, 30

Conread position: 1-398
Cow position: chr6:35103583-35103175 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 21

Conread position: 1-419
Cow position: chr6:54867253-54867691 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 22

Conread position: 1-429
Cow position: chr6:25407665-25407208 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 281

Conread position: 1-438
Cow position: chr6:40031935-40032377 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 30

Conread position: 1-450
Cow position: chr6:6067947-6067502 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 24

Conread position: 1-450
Cow position: chr6:16352578-16352161 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 54

Conread position: 1-451
Cow position: chr6:7801624-7801192 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 30

Conread position: 1-457
Cow position: chr6:1770454-1769985 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 30

Conread position: 1-457
Cow position: chr6:5095813-5095330 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 40

Conread position: 1-457
Cow position: chr6:6060816-6060362 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 30

Conread position: 1-457
Cow position: chr6:21587680-21587225 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 30

Conread position: 1-458
Cow position: chr6:27851963-27851498 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 30

Conread position: 1-459
Cow position: chr6:10332365-10331887 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 252

Conread position: 1-459
Cow position: chr6:17557116-17557586 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 327
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 120, 30

Conread position: 1-459
Cow position: chr6:44078257-44078726 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 78

Conread position: 1-459
Cow position: chr6:46557799-46558265 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 30

Conread position: 1-459
Cow position: chr6:48567601-48567148 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 39

Conread position: 1-460
Cow position: chr6:16765651-16765186 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 30

Conread position: 1-460
Cow position: chr6:22332657-22332183 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 30

Conread position: 1-460
Cow position: chr6:28482756-28483229 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 40

Conread position: 1-461
Cow position: chr6:2607355-2607821 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 21

Conread position: 1-461
Cow position: chr6:18080773-18080303 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 30

Conread position: 1-461
Cow position: chr6:18447767-18447302 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 33

Conread position: 1-461
Cow position: chr6:24781822-24781338 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 335
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 92, 39

Conread position: 1-461
Cow position: chr6:35842402-35842873 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 30

Conread position: 1-461
Cow position: chr6:46465569-46466031 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 39

Conread position: 1-461
Cow position: chr6:51835141-51835611 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 30

Conread position: 1-461
Cow position: chr6:53178381-53178839 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 30

Conread position: 1-461
Cow position: chr6:54365582-54365116 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 30

Conread position: 1-461
Cow position: chr6:55688782-55689242 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 28

Conread position: 1-461
Cow position: chr6:61515456-61514985 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 30

Conread position: 2-244
Cow position: chr6:6596320-6596559 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 172
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 119, 35

Conread position: 2-347
Cow position: chr6:48169687-48170040 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 38

Conread position: 2-461
Cow position: chr6:9737370-9736912 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 295
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 119, 29

Conread position: 3-234
Cow position: chr6:58075971-58076198 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 177
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 119, 19

Conread position: 3-460
Cow position: chr6:12337728-12338202 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 39

Conread position: 3-461
Cow position: chr6:32125810-32126265 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 39

Conread position: 3-461
Cow position: chr6:47305071-47305555 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 370

Conread position: 5-204
Cow position: chr6:5329900-5330090 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 160
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 117, 26

Conread position: 5-218
Cow position: chr6:9733086-9732890 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 154
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 5-294
Cow position: chr6:60456576-60456878 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 229
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 113, 24

Conread position: 5-302
Cow position: chr6:19508686-19508408 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 222
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 115, 17

Conread position: 5-335
Cow position: chr6:607007-607353 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 26

Conread position: 5-349
Cow position: chr6:52248392-52248026 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 266
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 47, 29

Conread position: 5-384
Cow position: chr6:63272872-63272473 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 26

Conread position: 5-389
Cow position: chr6:4864793-4864403 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 37

Conread position: 5-397
Cow position: chr6:47339611-47339204 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 26

Conread position: 5-400
Cow position: chr6:42565431-42565842 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 37

Conread position: 5-420
Cow position: chr6:14839281-14838871 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 274
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 115, 34

Conread position: 5-440
Cow position: chr6:21590463-21590897 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 26

Conread position: 5-457
Cow position: chr6:8562461-8562927 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 35

Conread position: 5-458
Cow position: chr6:2546988-2547465 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 338
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 115, 26

Conread position: 5-459
Cow position: chr6:39358594-39358132 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 28

Conread position: 5-460
Cow position: chr6:55610490-55610016 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 316
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 116, 26

Conread position: 5-460
Cow position: chr6:60057920-60057426 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 53

Conread position: 5-461
Cow position: chr6:3952270-3952734 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 33

Conread position: 5-461
Cow position: chr6:13688066-13687603 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 22

Conread position: 5-461
Cow position: chr6:15938119-15937639 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 104

Conread position: 5-461
Cow position: chr6:21534804-21535253 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 26

Conread position: 5-461
Cow position: chr6:33302155-33302609 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 26

Conread position: 5-461
Cow position: chr6:48281740-48282208 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 26

Conread position: 5-461
Cow position: chr6:65870769-65871244 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 338
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 115, 35

Conread position: 6-395
Cow position: chr6:34196402-34195999 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 25

Conread position: 6-458
Cow position: chr6:53933094-53932635 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 28

Conread position: 6-460
Cow position: chr6:66363498-66363020 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 319
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 115, 25

Conread position: 7-207
Cow position: chr6:29077475-29077671 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 158
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 114, 16

Conread position: 7-373
Cow position: chr6:51071451-51071836 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 259
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 108, 64

Conread position: 7-403
Cow position: chr6:42961620-42961205 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 24

Conread position: 7-460
Cow position: chr6:35181506-35181042 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 24

Conread position: 11-460
Cow position: chr6:54132570-54133023 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 14

Conread position: 11-461
Cow position: chr6:15242587-15243052 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 20

Conread position: 12-224
Cow position: chr6:53710868-53711074 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 164
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 108, 29

Conread position: 12-458
Cow position: chr6:38771042-38771481 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 25

Conread position: 12-461
Cow position: chr6:31535820-31535360 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 321
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 108, 19

Conread position: 12-461
Cow position: chr6:65676009-65676457 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 19

Conread position: 13-216
Cow position: chr6:12845070-12845263 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 170
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 104, 18

Conread position: 13-461
Cow position: chr6:56849771-56850230 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 321
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 107, 18

Conread position: 33-231
Cow position: chr6:388938-389135 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 158
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 84, 74

Conread position: 36-461
Cow position: chr6:24468622-24468186 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 91

Conread position: 39-459
Cow position: chr6:397240-397690 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 303
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 10, 24

Conread position: 40-461
Cow position: chr6:6201219-6201646 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 26

Conread position: 41-231
Cow position: chr6:25008490-25008675 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 79, 43

Conread position: 43-373
Cow position: chr6:54369122-54368776 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 33

Conread position: 43-461
Cow position: chr6:7190342-7189916 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 255

Conread position: 45-461
Cow position: chr6:10176524-10176086 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 32

Conread position: 46-218
Cow position: chr6:21542100-21542273 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 134
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 74, 0

Conread position: 46-218
Cow position: chr6:59302046-59301867 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 149
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 8, 155

Conread position: 46-222
Cow position: chr6:55608026-55607855 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 146
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 74, 119

Conread position: 46-224
Cow position: chr6:1783992-1783818 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 148
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 71, 57

Conread position: 46-224
Cow position: chr6:6264424-6264602 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 140
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 69, 31

Conread position: 46-224
Cow position: chr6:49685365-49685543 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 74, 135

Conread position: 46-231
Cow position: chr6:130384-130196 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 154
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 74, 30

Conread position: 46-260
Cow position: chr6:7694573-7694349 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 175
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 93, 31

Conread position: 46-260
Cow position: chr6:30786368-30786140 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 169
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 71, 97

Conread position: 46-363
Cow position: chr6:19329977-19329649 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 236
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 72, 222

Conread position: 46-378
Cow position: chr6:49002944-49002607 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 246
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 74, 30

Conread position: 46-397
Cow position: chr6:19681740-19681373 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 20

Conread position: 46-397
Cow position: chr6:68049216-68049569 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 30

Conread position: 46-398
Cow position: chr6:21110749-21111105 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 115

Conread position: 46-421
Cow position: chr6:18049245-18048842 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 31

Conread position: 46-449
Cow position: chr6:61631839-61631404 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 241

Conread position: 46-454
Cow position: chr6:6063499-6063086 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 106

Conread position: 46-457
Cow position: chr6:29239723-29240141 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 307
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 32, 77

Conread position: 46-458
Cow position: chr6:13367075-13367492 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 76

Conread position: 46-458
Cow position: chr6:67950739-67951168 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 286

Conread position: 46-460
Cow position: chr6:27240201-27239792 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 95

Conread position: 46-460
Cow position: chr6:28148031-28148471 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 8

Conread position: 46-460
Cow position: chr6:32121691-32122107 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 154

Conread position: 46-460
Cow position: chr6:38853878-38853444 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 155

Conread position: 46-461
Cow position: chr6:4383273-4383687 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 38

Conread position: 46-461
Cow position: chr6:10612640-10613043 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 302
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 31, 98

Conread position: 46-461
Cow position: chr6:15305366-15305784 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 31

Conread position: 46-461
Cow position: chr6:16103422-16102979 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 91

Conread position: 46-461
Cow position: chr6:34251495-34251085 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 20

Conread position: 46-461
Cow position: chr6:34475763-34475345 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 31

Conread position: 46-461
Cow position: chr6:38207715-38207273 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 30

Conread position: 46-461
Cow position: chr6:41733407-41733848 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 102

Conread position: 46-461
Cow position: chr6:60859526-60859085 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 189

Conread position: 46-461
Cow position: chr6:61489125-61489533 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 275
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 24, 112

Conread position: 46-461
Cow position: chr6:64431719-64432146 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 376

Conread position: 46-461
Cow position: chr6:66087735-66088156 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 89

Conread position: 47-209
Cow position: chr6:21184737-21184902 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 134
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 70, 155

Conread position: 47-218
Cow position: chr6:61113531-61113710 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 146
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 70, 0

Conread position: 47-241
Cow position: chr6:40774567-40774376 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 74, 93

Conread position: 47-244
Cow position: chr6:20231044-20230848 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 160
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 73, 44

Conread position: 47-256
Cow position: chr6:10635958-10636166 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 129, 29

Conread position: 47-290
Cow position: chr6:5462267-5462013 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 196
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 126, 34

Conread position: 47-302
Cow position: chr6:45160510-45160241 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 209
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 74, 30

Conread position: 47-370
Cow position: chr6:28476963-28477293 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 228
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 74, 96

Conread position: 47-381
Cow position: chr6:38614605-38614949 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 96

Conread position: 47-397
Cow position: chr6:9008830-9008460 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 229

Conread position: 47-397
Cow position: chr6:28977250-28976888 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 47-397
Cow position: chr6:35435784-35436146 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 47-397
Cow position: chr6:45065225-45064865 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 74

Conread position: 47-397
Cow position: chr6:66874143-66874501 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 73

Conread position: 47-415
Cow position: chr6:14949700-14949309 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 151

Conread position: 47-421
Cow position: chr6:5302623-5302245 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 99

Conread position: 47-421
Cow position: chr6:66532020-66531648 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 29

Conread position: 47-451
Cow position: chr6:24902360-24901952 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 342

Conread position: 47-453
Cow position: chr6:37148978-37149390 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 35

Conread position: 47-457
Cow position: chr6:50983989-50984434 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 134

Conread position: 47-459
Cow position: chr6:19401643-19402056 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 93

Conread position: 47-461
Cow position: chr6:7103454-7103026 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 11

Conread position: 47-461
Cow position: chr6:15301036-15300627 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 101

Conread position: 47-461
Cow position: chr6:35990441-35990026 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 29

Conread position: 47-461
Cow position: chr6:60144396-60143986 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 88

Conread position: 47-461
Cow position: chr6:66433729-66434167 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 124

Conread position: 48-222
Cow position: chr6:3719226-3719046 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 149
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 24, 153

Conread position: 48-335
Cow position: chr6:242596-242891 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 87

Conread position: 48-395
Cow position: chr6:15923215-15922882 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 235
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 72, 29

Conread position: 48-458
Cow position: chr6:21737102-21736692 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 75

Conread position: 51-224
Cow position: chr6:6460327-6460502 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 142
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 66, 26

Conread position: 51-231
Cow position: chr6:48344113-48344297 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 144
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 66, 150

Conread position: 51-252
Cow position: chr6:53460786-53460589 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 161
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 69, 29

Conread position: 51-268
Cow position: chr6:3374784-3374564 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 161
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 68, 26

Conread position: 51-301
Cow position: chr6:25773596-25773329 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 202
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 70, 97

Conread position: 51-372
Cow position: chr6:899499-899166 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 234
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 122, 49

Conread position: 51-403
Cow position: chr6:54991207-54990843 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 262
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 69, 25

Conread position: 51-450
Cow position: chr6:58304215-58304618 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 175

Conread position: 51-457
Cow position: chr6:611346-611752 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 192

Conread position: 51-457
Cow position: chr6:45690808-45690406 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 25

Conread position: 51-461
Cow position: chr6:17997530-17997104 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 220

Conread position: 51-461
Cow position: chr6:24110089-24110497 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 99

Conread position: 51-461
Cow position: chr6:50090425-50090858 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 150

Conread position: 52-461
Cow position: chr6:5609654-5609229 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 143

Conread position: 52-461
Cow position: chr6:59620455-59620869 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 188

Conread position: 52-461
Cow position: chr6:65702615-65702196 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 218

Conread position: 53-224
Cow position: chr6:62324777-62324952 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 24, 158

Conread position: 53-358
Cow position: chr6:54140601-54140910 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 23

Conread position: 53-397
Cow position: chr6:31564546-31564186 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 263
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 32, 11

Conread position: 53-461
Cow position: chr6:38440969-38441393 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 223

Conread position: 54-400
Cow position: chr6:59069840-59069465 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 54-461
Cow position: chr6:2896539-2896954 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 179

Conread position: 54-461
Cow position: chr6:53025010-53024598 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 111

Conread position: 54-461
Cow position: chr6:57405336-57404923 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 296
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 68, 37

Conread position: 55-461
Cow position: chr6:53139140-53138725 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 181

Conread position: 56-224
Cow position: chr6:46666894-46667071 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 141
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 76, 65

Conread position: 56-234
Cow position: chr6:44377056-44377237 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 63, 20

Conread position: 56-457
Cow position: chr6:57546443-57546017 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 308
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 10, 30

Conread position: 56-461
Cow position: chr6:58732524-58732087 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 299
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 67, 176

Conread position: 57-312
Cow position: chr6:47988981-47989239 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 209
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 63, 20

Conread position: 58-372
Cow position: chr6:28080105-28079787 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 223
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 63, 92

Conread position: 58-388
Cow position: chr6:7989621-7989272 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 33

Conread position: 58-461
Cow position: chr6:21231329-21231725 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 5

Conread position: 59-398
Cow position: chr6:14958556-14958187 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 0

Conread position: 59-433
Cow position: chr6:31260780-31261183 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 183

Conread position: 59-461
Cow position: chr6:19695600-19696022 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 17

Conread position: 60-461
Cow position: chr6:5114254-5113834 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 299
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 16, 34

Conread position: 60-461
Cow position: chr6:38641292-38641707 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 97

Conread position: 61-234
Cow position: chr6:445106-445289 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 145
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 59, 177

Conread position: 61-458
Cow position: chr6:20157120-20157545 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 288
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 54, 16

Conread position: 62-457
Cow position: chr6:67187487-67187890 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 64

Conread position: 63-224
Cow position: chr6:66131105-66131265 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 133
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 57, 72

Conread position: 64-224
Cow position: chr6:52025857-52025693 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 132
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 9, 0

Conread position: 64-331
Cow position: chr6:28148643-28148921 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 202
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 56, 13

Conread position: 64-397
Cow position: chr6:528478-528132 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 16

Conread position: 64-460
Cow position: chr6:10400097-10399696 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 155

Conread position: 65-321
Cow position: chr6:46245524-46245260 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 196
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 55, 165

Conread position: 67-231
Cow position: chr6:33276840-33277008 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 138
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 72, 55

Conread position: 67-317
Cow position: chr6:37603324-37603572 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 201
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 53, 135

Conread position: 67-395
Cow position: chr6:8788236-8787887 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 94

Conread position: 67-397
Cow position: chr6:63299222-63298879 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 20

Conread position: 67-460
Cow position: chr6:55546359-55545960 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 28

Conread position: 68-421
Cow position: chr6:46865791-46865412 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 268
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 52, 202

Conread position: 68-460
Cow position: chr6:48187779-48187365 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 281
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 53, 72

Conread position: 68-461
Cow position: chr6:12092182-12091773 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 71

Conread position: 69-400
Cow position: chr6:9751237-9750902 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 104

Conread position: 70-208
Cow position: chr6:33918047-33917904 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 70-218
Cow position: chr6:53731325-53731475 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 121
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 53, 126

Conread position: 70-458
Cow position: chr6:32269066-32268677 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 274
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 156, 33

Conread position: 70-460
Cow position: chr6:7128598-7128192 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 280
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 42, 331

Conread position: 71-458
Cow position: chr6:37467734-37467327 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 191

Conread position: 71-458
Cow position: chr6:63720004-63720402 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 276
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 105, 49

Conread position: 71-461
Cow position: chr6:46292533-46292142 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 285
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 46, 72

Conread position: 71-461
Cow position: chr6:52412659-52413075 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 290
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 49, 202

Conread position: 73-230
Cow position: chr6:57680629-57680467 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 8, 145

Conread position: 73-430
Cow position: chr6:53519816-53519432 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 204

Conread position: 75-458
Cow position: chr6:47355633-47356036 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 122

Conread position: 75-460
Cow position: chr6:63252114-63251709 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 199

Conread position: 78-231
Cow position: chr6:47799110-47799257 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 123
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 100, 45

Conread position: 78-398
Cow position: chr6:65259655-65259339 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 241
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 146, 60

Conread position: 80-362
Cow position: chr6:30973854-30974159 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 224
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 8, 206

Conread position: 80-457
Cow position: chr6:6226838-6227220 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 42

Conread position: 80-460
Cow position: chr6:37246616-37246227 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 156

Conread position: 82-461
Cow position: chr6:1703630-1704010 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 119

Conread position: 83-461
Cow position: chr6:12668921-12669311 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 66

Conread position: 85-366
Cow position: chr6:32518054-32517759 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 208
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 32, 162

Conread position: 86-416
Cow position: chr6:37783234-37783571 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 173

Conread position: 91-455
Cow position: chr6:59104433-59104805 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 168

Conread position: 91-455
Cow position: chr6:59798493-59798861 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 266
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 30, 66

Conread position: 91-461
Cow position: chr6:8125157-8125542 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 55

Conread position: 92-461
Cow position: chr6:60819341-60819728 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 175

Conread position: 93-322
Cow position: chr6:40760961-40761202 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 181
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 27, 98

Conread position: 95-461
Cow position: chr6:33451103-33450764 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 48

Conread position: 96-453
Cow position: chr6:15447378-15446988 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 97-461
Cow position: chr6:11246595-11246981 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 40

Conread position: 98-461
Cow position: chr6:19446092-19446466 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 41

Conread position: 99-421
Cow position: chr6:16764809-16764470 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 91

Conread position: 101-370
Cow position: chr6:12543098-12542805 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 214
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 19, 0

Conread position: 102-397
Cow position: chr6:26450153-26450465 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 236
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 18, 160

Conread position: 103-329
Cow position: chr6:44984163-44984417 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 190
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 14, 0

Conread position: 103-386
Cow position: chr6:47640600-47640291 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 214
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 17, 172

Conread position: 103-461
Cow position: chr6:60783707-60784084 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 258
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 18, 56

Conread position: 106-370
Cow position: chr6:55763694-55763978 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 204
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 14, 218

Conread position: 106-456
Cow position: chr6:27888188-27888555 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 64

Conread position: 106-461
Cow position: chr6:31847380-31847031 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 242
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 14, 115

Conread position: 109-433
Cow position: chr6:1371381-1371038 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 246
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 63, 17

Conread position: 109-461
Cow position: chr6:60739858-60740223 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 171

Conread position: 111-450
Cow position: chr6:67323161-67323508 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 88

Conread position: 111-458
Cow position: chr6:19755232-19754868 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 262
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 6, 156

Conread position: 115-461
Cow position: chr6:38609819-38610187 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 9

Conread position: 116-461
Cow position: chr6:48988286-48988647 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 131

Conread position: 118-414
Cow position: chr6:16316159-16316485 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 241
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 21, 48

Conread position: 118-461
Cow position: chr6:67574260-67574603 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 57

Conread position: 119-453
Cow position: chr6:17817131-17816786 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 240
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 45, 110

Conread position: 119-457
Cow position: chr6:19264646-19264289 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 250
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 24, 150

Conread position: 119-461
Cow position: chr6:9219127-9219476 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 262
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 54, 165

Conread position: 119-461
Cow position: chr6:19292666-19293011 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 251
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 39, 19

Conread position: 119-461
Cow position: chr6:54036281-54035927 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 249
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 56, 75

Conread position: 120-420
Cow position: chr6:582412-582100 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 25

Conread position: 124-224
Cow position: chr6:50509537-50509638 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 49, 71

Conread position: 124-461
Cow position: chr6:19996479-19996828 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 36

Conread position: 125-378
Cow position: chr6:28156286-28156030 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 189
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 51, 38

Conread position: 127-434
Cow position: chr6:43135082-43134749 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 159

Conread position: 128-461
Cow position: chr6:45388193-45388534 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 245
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 98, 236

Conread position: 132-370
Cow position: chr6:377004-377250 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 181
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 94, 27

Conread position: 133-461
Cow position: chr6:55209427-55209773 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 239
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 47, 15

Conread position: 133-461
Cow position: chr6:62669742-62670084 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 32

Conread position: 134-302
Cow position: chr6:19563900-19563720 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 134-327
Cow position: chr6:14812483-14812290 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 46, 11

Conread position: 134-457
Cow position: chr6:15243125-15243471 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 250
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 39, 62

Conread position: 134-460
Cow position: chr6:53841630-53841291 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 239
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 46, 137

Conread position: 134-461
Cow position: chr6:17313603-17313951 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 119

Conread position: 134-461
Cow position: chr6:21399884-21399541 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 330

Conread position: 134-461
Cow position: chr6:47833245-47832899 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 239
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 39, 24

Conread position: 135-396
Cow position: chr6:60667291-60667561 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 211
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 42, 24

Conread position: 137-461
Cow position: chr6:62929368-62929711 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 234
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 40, 150

Conread position: 138-460
Cow position: chr6:31814864-31814534 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 223
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 35, 103

Conread position: 138-461
Cow position: chr6:22850372-22850039 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 7

Conread position: 142-418
Cow position: chr6:21234921-21235216 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 215
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 31, 0

Conread position: 142-461
Cow position: chr6:50467012-50467351 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 236
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 33, 0

Conread position: 143-457
Cow position: chr6:33206630-33206938 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 235
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 48, 27

Conread position: 143-458
Cow position: chr6:10225761-10225440 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 238
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 30, 56

Conread position: 143-460
Cow position: chr6:35725973-35726302 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 52

Conread position: 144-461
Cow position: chr6:16261665-16261994 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 226
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 47, 21

Conread position: 145-461
Cow position: chr6:4144549-4144855 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 225
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 31, 82

Conread position: 147-461
Cow position: chr6:61644954-61644643 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 226
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 9, 16

Conread position: 148-461
Cow position: chr6:54854132-54854463 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 234
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 32, 47

Conread position: 153-460
Cow position: chr6:10039609-10039938 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 153-461
Cow position: chr6:46173370-46173045 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 170

Conread position: 160-393
Cow position: chr6:36645283-36645533 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 189
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 13, 161

Conread position: 160-458
Cow position: chr6:61168670-61168975 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 201
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 66, 80

Conread position: 165-461
Cow position: chr6:50504367-50504669 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 211
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 31, 246

Conread position: 171-461
Cow position: chr6:19045532-19045841 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 172-452
Cow position: chr6:51539155-51538867 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 199
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 50, 21

Conread position: 172-461
Cow position: chr6:20371213-20371518 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 202
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 49, 29

Conread position: 180-457
Cow position: chr6:5330344-5330623 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 201

Conread position: 180-458
Cow position: chr6:60516757-60517048 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 202
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 39, 76

Conread position: 183-421
Cow position: chr6:46330859-46331096 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 173
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 72, 37

Conread position: 184-461
Cow position: chr6:2078882-2078603 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 198
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 35, 227

Conread position: 184-461
Cow position: chr6:23402053-23401782 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 76

Conread position: 184-461
Cow position: chr6:28559459-28559753 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 211
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 19, 236

Conread position: 185-457
Cow position: chr6:18139556-18139283 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 185
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 40, 163

Conread position: 186-342
Cow position: chr6:54365064-54364895 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 134
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 22, 0

Conread position: 186-378
Cow position: chr6:65846185-65845998 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 148
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 23, 16

Conread position: 186-449
Cow position: chr6:67281836-67282092 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 195
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 22, 57

Conread position: 186-450
Cow position: chr6:16288113-16287861 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 200
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 11, 67

Conread position: 187-453
Cow position: chr6:21467321-21467060 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 63

Conread position: 191-461
Cow position: chr6:22205084-22204811 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 178
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 35, 0

Conread position: 192-422
Cow position: chr6:3592346-3592574 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 179
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 30, 15

Conread position: 193-343
Cow position: chr6:59108891-59109043 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 9, 72

Conread position: 193-424
Cow position: chr6:2623728-2623951 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 168
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 15, 67

Conread position: 193-438
Cow position: chr6:4559358-4559124 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 180
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 14, 118

Conread position: 193-451
Cow position: chr6:36189644-36189903 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 124

Conread position: 193-453
Cow position: chr6:8599951-8600212 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 201
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 15, 53

Conread position: 193-457
Cow position: chr6:62371229-62370975 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 199
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 11, 61

Conread position: 193-459
Cow position: chr6:44867594-44867335 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 67

Conread position: 193-461
Cow position: chr6:4468714-4468979 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 92

Conread position: 193-461
Cow position: chr6:37395462-37395190 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 228

Conread position: 193-461
Cow position: chr6:54208191-54207919 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 179
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 14, 81

Conread position: 194-458
Cow position: chr6:54490790-54490536 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 205
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 8, 143

Conread position: 194-461
Cow position: chr6:9718973-9718704 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 204
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 14, 108

Conread position: 196-395
Cow position: chr6:37462969-37463172 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 159
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 23, 7

Conread position: 198-460
Cow position: chr6:67516588-67516846 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 173
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 28, 61

Conread position: 199-461
Cow position: chr6:51540959-51541226 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 173
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 204-312
Cow position: chr6:34075985-34076096 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 95
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 204-385
Cow position: chr6:66375372-66375192 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 42

Conread position: 204-390
Cow position: chr6:51969025-51969221 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 150
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 15, 58

Conread position: 204-391
Cow position: chr6:17549023-17548828 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 150
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 15, 0

Conread position: 204-396
Cow position: chr6:6673062-6673258 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 15, 52

Conread position: 204-405
Cow position: chr6:11830153-11830347 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 151
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 21, 31

Conread position: 204-438
Cow position: chr6:68652395-68652162 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 175
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 15, 192

Conread position: 204-449
Cow position: chr6:2153640-2153395 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 52

Conread position: 204-451
Cow position: chr6:52478456-52478208 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 176
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 15, 199

Conread position: 204-457
Cow position: chr6:22985900-22985653 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 180
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 15, 72

Conread position: 204-457
Cow position: chr6:67451414-67451159 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 184
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 40, 0

Conread position: 204-458
Cow position: chr6:22215510-22215252 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 191
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 13, 45

Conread position: 204-460
Cow position: chr6:16700223-16700466 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 194
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 23, 51

Conread position: 204-460
Cow position: chr6:58370712-58370959 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 195
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 15, 131

Conread position: 204-461
Cow position: chr6:4692021-4691752 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 164

Conread position: 204-461
Cow position: chr6:14914283-14914021 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 95

Conread position: 204-461
Cow position: chr6:23353511-23353769 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 199
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 15, 52

Conread position: 204-461
Cow position: chr6:32287596-32287844 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 177
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 15, 149

Conread position: 204-461
Cow position: chr6:33509748-33510002 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 48

Conread position: 204-461
Cow position: chr6:59603253-59603002 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 186
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 15, 192

Conread position: 204-461
Cow position: chr6:62437372-62437630 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 32

Conread position: 204-461
Cow position: chr6:68816124-68816384 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 181
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 15, 82

Conread position: 206-461
Cow position: chr6:43345483-43345227 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 188
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 16, 198

Conread position: 208-458
Cow position: chr6:9557738-9557979 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 165
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 211-397
Cow position: chr6:41656078-41655890 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 44, 0

Conread position: 211-453
Cow position: chr6:46274164-46273925 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 185
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 9, 110

Conread position: 211-457
Cow position: chr6:40774380-40774125 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 193
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 8, 205

Conread position: 212-458
Cow position: chr6:8094325-8094075 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 178
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 7, 160

Conread position: 212-461
Cow position: chr6:61884194-61883960 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 191
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 7, 46

Conread position: 215-311
Cow position: chr6:5673217-5673313 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 81
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 215-421
Cow position: chr6:20605924-20606135 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 159
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 39, 175

Conread position: 215-451
Cow position: chr6:35319162-35318930 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 174
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 182, 19

Conread position: 217-446
Cow position: chr6:55502736-55502971 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 218-313
Cow position: chr6:30688642-30688547 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 83
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 218-389
Cow position: chr6:17527615-17527445 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 136
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 87, 0

Conread position: 218-390
Cow position: chr6:32853159-32853332 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 31, 104

Conread position: 218-420
Cow position: chr6:37199557-37199365 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 160
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 37, 100

Conread position: 218-421
Cow position: chr6:35896367-35896178 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 153
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 14, 0

Conread position: 218-450
Cow position: chr6:18144164-18144412 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 185
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 84, 0

Conread position: 218-457
Cow position: chr6:17068676-17068443 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 167
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 46, 182

Conread position: 218-457
Cow position: chr6:55205339-55205098 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 170
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 27, 188

Conread position: 218-458
Cow position: chr6:40050042-40050288 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 175
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 18, 41

Conread position: 218-460
Cow position: chr6:143398-143166 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 218-460
Cow position: chr6:17794788-17794543 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 186
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 186, 33

Conread position: 218-461
Cow position: chr6:7119647-7119417 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 187
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 34, 42

Conread position: 218-461
Cow position: chr6:23025140-23024885 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 186
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 28, 0

Conread position: 218-461
Cow position: chr6:36921002-36920762 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 171
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 38, 95

Conread position: 221-337
Cow position: chr6:22985604-22985486 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 221-358
Cow position: chr6:22502933-22502798 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 23, 0

Conread position: 221-380
Cow position: chr6:51399060-51399210 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 126
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 153, 26

Conread position: 221-421
Cow position: chr6:19131405-19131606 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 155
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 39, 0

Conread position: 221-421
Cow position: chr6:35993560-35993757 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 160
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 153, 0

Conread position: 221-421
Cow position: chr6:55535773-55535576 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 160
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 36, 30

Conread position: 221-421
Cow position: chr6:67456698-67456894 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 154
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 34, 0

Conread position: 221-448
Cow position: chr6:17334077-17333850 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 157
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 41, 24

Conread position: 221-451
Cow position: chr6:21514634-21514403 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 214

Conread position: 221-452
Cow position: chr6:28973059-28972829 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 160
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 179, 39

Conread position: 221-453
Cow position: chr6:12964828-12965062 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 0

Conread position: 221-453
Cow position: chr6:13510150-13510379 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 25, 38

Conread position: 221-453
Cow position: chr6:51530209-51529980 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 29

Conread position: 221-454
Cow position: chr6:61524231-61523998 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 29, 186

Conread position: 221-457
Cow position: chr6:38640207-38640443 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 168
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 32, 185

Conread position: 221-457
Cow position: chr6:48097626-48097391 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 173
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 45, 24

Conread position: 221-457
Cow position: chr6:56986669-56986439 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 221-458
Cow position: chr6:22525308-22525536 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 182
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 30, 0

Conread position: 221-460
Cow position: chr6:5845196-5844956 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 169
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 28, 0

Conread position: 221-460
Cow position: chr6:17954273-17954035 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 184
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 64, 11

Conread position: 221-460
Cow position: chr6:44566393-44566638 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 172
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 21, 174

Conread position: 221-460
Cow position: chr6:47540871-47540628 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 182
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 83, 11

Conread position: 221-461
Cow position: chr6:445297-445541 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 184
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 31, 0

Conread position: 221-461
Cow position: chr6:581768-581527 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 173
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 141, 24

Conread position: 221-461
Cow position: chr6:694175-693932 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 173
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 174, 133

Conread position: 221-461
Cow position: chr6:2584917-2585154 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 185

Conread position: 221-461
Cow position: chr6:3329963-3330209 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 175
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 41, 34

Conread position: 221-461
Cow position: chr6:8161716-8161472 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 179
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 41, 24

Conread position: 221-461
Cow position: chr6:18118076-18117838 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 168
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 40, 102

Conread position: 221-461
Cow position: chr6:18608839-18608597 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 39

Conread position: 221-461
Cow position: chr6:18904077-18903824 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 175
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 31, 81

Conread position: 221-461
Cow position: chr6:23453634-23453856 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 175
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 110, 34

Conread position: 221-461
Cow position: chr6:30123213-30122954 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 188
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 221-461
Cow position: chr6:41015001-41014761 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 24

Conread position: 221-461
Cow position: chr6:41375746-41375983 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 180
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 40, 101

Conread position: 221-461
Cow position: chr6:47520026-47520267 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 163
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 31, 181

Conread position: 221-461
Cow position: chr6:56393748-56393986 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 176
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 41, 131

Conread position: 221-461
Cow position: chr6:57089172-57089417 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 185

Conread position: 221-461
Cow position: chr6:60118126-60118355 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 183
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 36, 18

Conread position: 221-461
Cow position: chr6:63065800-63066050 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 175
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 16, 166

Conread position: 222-460
Cow position: chr6:21004649-21004892 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 10

Conread position: 223-424
Cow position: chr6:44623585-44623791 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 162
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 35, 0

Conread position: 223-460
Cow position: chr6:55417549-55417321 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 28

Conread position: 223-461
Cow position: chr6:24339261-24339502 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 187
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 35, 8

Conread position: 223-461
Cow position: chr6:48803658-48803427 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 176
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 33, 99

Conread position: 223-461
Cow position: chr6:53546013-53546242 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 168
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 37, 22

Conread position: 223-461
Cow position: chr6:60121622-60121383 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 171
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 53, 29

Conread position: 224-357
Cow position: chr6:33346897-33347029 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 224-454
Cow position: chr6:31078893-31078662 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 164
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 75, 26

Conread position: 224-461
Cow position: chr6:21293518-21293285 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 172
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 28, 125

Conread position: 225-451
Cow position: chr6:3464269-3464500 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 157
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 20, 122

Conread position: 225-461
Cow position: chr6:50862920-50863160 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 167
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 30, 20

Conread position: 226-461
Cow position: chr6:36809227-36808989 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 174
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 60, 105

Conread position: 226-461
Cow position: chr6:42567472-42567709 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 19

Conread position: 227-395
Cow position: chr6:20196315-20196153 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 137
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 18, 0

Conread position: 227-397
Cow position: chr6:28178967-28178803 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 33, 90

Conread position: 227-418
Cow position: chr6:59301806-59301617 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 68, 32

Conread position: 227-450
Cow position: chr6:35727823-35728055 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 170
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 6, 11

Conread position: 228-461
Cow position: chr6:64429214-64428981 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 160
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 36, 112

Conread position: 228-461
Cow position: chr6:67728353-67728591 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 171
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 21, 0

Conread position: 229-394
Cow position: chr6:13053778-13053946 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 133
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 33, 26

Conread position: 229-397
Cow position: chr6:2899589-2899414 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 27, 0

Conread position: 229-460
Cow position: chr6:32043830-32044062 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 155
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 230-455
Cow position: chr6:1103752-1103533 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 176
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 27, 0

Conread position: 231-421
Cow position: chr6:60451407-60451600 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 159
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 21, 177

Conread position: 232-440
Cow position: chr6:59631937-59631727 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 155
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 72, 26

Conread position: 232-452
Cow position: chr6:32453373-32453591 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 26

Conread position: 232-461
Cow position: chr6:27219165-27219379 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 180
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 25, 55

Conread position: 233-461
Cow position: chr6:48379628-48379398 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 233-461
Cow position: chr6:60150726-60150490 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 159
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 238-415
Cow position: chr6:10224194-10224361 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 17, 0

Conread position: 238-460
Cow position: chr6:54831472-54831690 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 17, 0

Conread position: 239-457
Cow position: chr6:12928141-12928349 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 161
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 161, 22

Conread position: 239-460
Cow position: chr6:61556821-61557044 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 151
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 86, 0

Conread position: 239-461
Cow position: chr6:51121081-51120853 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 159
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 65, 128

Conread position: 241-452
Cow position: chr6:21475719-21475931 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 146

Conread position: 241-461
Cow position: chr6:10466088-10466303 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 166
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 25, 127

Conread position: 242-392
Cow position: chr6:36011903-36012049 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 12, 0

Conread position: 242-441
Cow position: chr6:61824411-61824605 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 151
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 166, 22

Conread position: 242-460
Cow position: chr6:55297098-55296880 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 242-461
Cow position: chr6:66590078-66590285 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 169
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 22, 105

Conread position: 245-432
Cow position: chr6:61113767-61113954 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 131
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 17, 26

Conread position: 245-461
Cow position: chr6:17704830-17705047 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 154
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 17, 0

Conread position: 245-461
Cow position: chr6:31806930-31806712 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 151
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 30, 0

Conread position: 245-461
Cow position: chr6:46462382-46462168 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 17, 9

Conread position: 246-459
Cow position: chr6:47782859-47783078 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 8, 0

Conread position: 246-461
Cow position: chr6:42034773-42034983 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 149
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 72, 86

Conread position: 246-461
Cow position: chr6:54846278-54846063 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 247-441
Cow position: chr6:14063308-14063106 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 158
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 14, 0

Conread position: 247-460
Cow position: chr6:21470427-21470220 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 148
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 155, 0

Conread position: 247-461
Cow position: chr6:6227736-6227522 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 146
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 29, 23

Conread position: 251-394
Cow position: chr6:11137236-11137383 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 10, 99

Conread position: 251-397
Cow position: chr6:54573264-54573411 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 14, 0

Conread position: 251-400
Cow position: chr6:67806008-67805860 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 120
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 7, 0

Conread position: 251-459
Cow position: chr6:26638387-26638603 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 159
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 53, 0

Conread position: 251-460
Cow position: chr6:50810666-50810461 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 58, 86

Conread position: 252-439
Cow position: chr6:54430839-54431021 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 252-452
Cow position: chr6:12761288-12761485 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 17, 0

Conread position: 252-457
Cow position: chr6:67069808-67069603 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 96, 36

Conread position: 252-461
Cow position: chr6:6229708-6229899 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 158
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 69, 0

Conread position: 252-461
Cow position: chr6:14166699-14166479 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 155
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 48, 8

Conread position: 252-461
Cow position: chr6:37827946-37827734 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 52, 100

Conread position: 252-461
Cow position: chr6:57115080-57115297 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 12, 0

Conread position: 253-453
Cow position: chr6:9832214-9832407 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 153
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 127, 0

Conread position: 253-457
Cow position: chr6:10105971-10105771 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 155
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 163, 0

Conread position: 253-460
Cow position: chr6:41169528-41169321 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 142
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 254-453
Cow position: chr6:37692760-37692955 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 157
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 37, 0

Conread position: 254-453
Cow position: chr6:69153422-69153617 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 160
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 38, 0

Conread position: 255-423
Cow position: chr6:61575835-61575997 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 39, 0

Conread position: 255-453
Cow position: chr6:10488260-10488075 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 154
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 76, 0

Conread position: 255-459
Cow position: chr6:8369439-8369635 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 159
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 6, 0

Conread position: 255-460
Cow position: chr6:16380553-16380759 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 156
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 19, 0

Conread position: 255-460
Cow position: chr6:51542902-51543111 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 153
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 49, 102

Conread position: 255-461
Cow position: chr6:23110190-23109978 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 49, 0

Conread position: 255-461
Cow position: chr6:44961215-44961007 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 145
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 81, 163

Conread position: 255-461
Cow position: chr6:50269674-50269469 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 144
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 7, 58

Conread position: 255-461
Cow position: chr6:51666328-51666122 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 20, 63

Conread position: 255-461
Cow position: chr6:52657958-52658167 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 142
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 85, 0

Conread position: 255-461
Cow position: chr6:55404916-55405128 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 156
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 31, 0

Conread position: 255-461
Cow position: chr6:56799889-56799678 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 148
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 47, 154

Conread position: 255-461
Cow position: chr6:68643999-68644205 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 143
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 256-450
Cow position: chr6:12270524-12270320 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 47, 153

Conread position: 257-400
Cow position: chr6:63047604-63047747 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 257-432
Cow position: chr6:8731420-8731599 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 148
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 47, 109

Conread position: 257-452
Cow position: chr6:28851985-28852180 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 257-461
Cow position: chr6:42483427-42483628 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 156
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 58, 0

Conread position: 258-439
Cow position: chr6:35171618-35171798 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 111, 88

Conread position: 258-448
Cow position: chr6:48435848-48436032 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 153
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 12, 0

Conread position: 258-457
Cow position: chr6:19225361-19225180 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 156
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 29, 0

Conread position: 258-460
Cow position: chr6:48157387-48157179 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 31, 104

Conread position: 258-461
Cow position: chr6:1475358-1475550 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 141, 0

Conread position: 258-461
Cow position: chr6:24536519-24536313 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 159
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 126, 0

Conread position: 258-461
Cow position: chr6:30502111-30501912 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 152
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 57, 0

Conread position: 258-461
Cow position: chr6:57079436-57079639 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 258-461
Cow position: chr6:61681090-61681291 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 159
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 136, 0

Conread position: 258-461
Cow position: chr6:68272603-68272816 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 151
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 154

Conread position: 259-454
Cow position: chr6:31865112-31865301 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 155
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 33, 0

Conread position: 259-457
Cow position: chr6:30023899-30024089 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 140, 0

Conread position: 259-461
Cow position: chr6:54127799-54127608 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 160
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 86, 0

Conread position: 259-461
Cow position: chr6:65535157-65534955 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 153
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 260-460
Cow position: chr6:55376163-55375962 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 147, 32

Conread position: 261-461
Cow position: chr6:66947802-66947610 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 161
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 42, 0

Conread position: 262-457
Cow position: chr6:60777778-60777981 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 150
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 31, 165

Conread position: 262-460
Cow position: chr6:21715065-21715262 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 139
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 42, 141

Conread position: 262-461
Cow position: chr6:45094583-45094791 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 154
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 50, 0

Conread position: 262-461
Cow position: chr6:66259747-66259950 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 163
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 117, 8

Conread position: 264-460
Cow position: chr6:28089029-28088835 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 152
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 114, 0

Conread position: 264-461
Cow position: chr6:50771340-50771147 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 158
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 44, 0

Conread position: 265-457
Cow position: chr6:33150272-33150084 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 158
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 178, 102

Conread position: 267-421
Cow position: chr6:21066862-21066707 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 124
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 37, 0

Conread position: 267-421
Cow position: chr6:61128935-61128781 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 267-460
Cow position: chr6:8365833-8366026 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 267-461
Cow position: chr6:56022535-56022339 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 134
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 268-418
Cow position: chr6:52044916-52044769 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 106, 62

Conread position: 268-460
Cow position: chr6:69374810-69374622 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 92, 0

Conread position: 269-461
Cow position: chr6:54840480-54840287 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 150
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 159, 29

Conread position: 271-461
Cow position: chr6:55054062-55054252 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 272-386
Cow position: chr6:44540576-44540689 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 272-398
Cow position: chr6:54284672-54284798 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 96
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 272-453
Cow position: chr6:62078949-62079125 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 144
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 130, 0

Conread position: 272-458
Cow position: chr6:41441722-41441536 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 272-461
Cow position: chr6:1090607-1090796 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 132
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 272-461
Cow position: chr6:22158188-22158000 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 131
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 130, 0

Conread position: 272-461
Cow position: chr6:42728672-42728859 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 148
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 106, 0

Conread position: 272-461
Cow position: chr6:47648209-47648021 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 97, 0

Conread position: 272-461
Cow position: chr6:50883651-50883465 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 146
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 38, 133

Conread position: 272-461
Cow position: chr6:54848955-54849144 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 272-461
Cow position: chr6:55548507-55548321 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 149
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 141, 0

Conread position: 272-461
Cow position: chr6:62811577-62811763 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 125, 0

Conread position: 272-461
Cow position: chr6:67462929-67462740 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 272-461
Cow position: chr6:67538303-67538116 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 132
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 272-461
Cow position: chr6:68628864-68628666 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 129, 10

Conread position: 273-458
Cow position: chr6:22253935-22253752 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 75, 0

Conread position: 274-461
Cow position: chr6:39414848-39415038 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 145
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 30, 133

Conread position: 276-461
Cow position: chr6:16090934-16091110 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 116, 0

Conread position: 276-461
Cow position: chr6:57295760-57295945 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 277-453
Cow position: chr6:54647472-54647293 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 111, 0

Conread position: 278-459
Cow position: chr6:34569440-34569627 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 136, 105

Conread position: 278-461
Cow position: chr6:21184190-21184010 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 150
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 77, 0

Conread position: 278-461
Cow position: chr6:22876898-22876715 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 148
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 278-461
Cow position: chr6:62707694-62707510 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 129
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 130, 0

Conread position: 279-460
Cow position: chr6:15587561-15587380 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 142
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 279-461
Cow position: chr6:3936818-3937000 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 138, 33

Conread position: 280-461
Cow position: chr6:16065810-16065631 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 125
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 281-414
Cow position: chr6:5461740-5461610 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 110
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 39, 0

Conread position: 282-421
Cow position: chr6:29853028-29852890 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 33, 0

Conread position: 282-461
Cow position: chr6:44706695-44706875 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 116, 121

Conread position: 282-461
Cow position: chr6:56582024-56581841 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 13, 23

Conread position: 283-461
Cow position: chr6:36537323-36537150 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 119, 0

Conread position: 283-461
Cow position: chr6:45921176-45921007 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 119, 0

Conread position: 284-422
Cow position: chr6:37603603-37603742 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 42

Conread position: 284-460
Cow position: chr6:15058415-15058587 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 149
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 136, 0

Conread position: 284-461
Cow position: chr6:24514507-24514321 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 285-457
Cow position: chr6:30895953-30895781 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 142
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 27, 11

Conread position: 285-459
Cow position: chr6:24491068-24491245 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 144
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 51, 132

Conread position: 285-460
Cow position: chr6:53711442-53711615 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 109, 0

Conread position: 285-461
Cow position: chr6:18677658-18677495 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 286-457
Cow position: chr6:14471404-14471574 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 19, 0

Conread position: 286-461
Cow position: chr6:8315423-8315598 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 122
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 108, 117

Conread position: 286-461
Cow position: chr6:19809976-19810151 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 123
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 286-461
Cow position: chr6:23058252-23058427 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 286-461
Cow position: chr6:34380774-34380603 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 123, 65

Conread position: 286-461
Cow position: chr6:56061701-56061876 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 286-461
Cow position: chr6:62724596-62724771 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 287-418
Cow position: chr6:19508146-19508015 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 107
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 287-457
Cow position: chr6:24776180-24776348 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 107, 0

Conread position: 287-457
Cow position: chr6:55044600-55044431 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 133
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 91, 0

Conread position: 287-461
Cow position: chr6:20075835-20076010 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 61, 0

Conread position: 287-461
Cow position: chr6:67633518-67633347 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 125
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 288-420
Cow position: chr6:62478827-62478695 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 111
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 288-441
Cow position: chr6:58076436-58076589 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 131
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 288-457
Cow position: chr6:46206340-46206503 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 112, 43

Conread position: 288-459
Cow position: chr6:5445709-5445879 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 136
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 20, 13

Conread position: 288-460
Cow position: chr6:36225151-36225322 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 143
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 112, 0

Conread position: 288-460
Cow position: chr6:60852601-60852421 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 110, 48

Conread position: 288-461
Cow position: chr6:11867237-11867064 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 121
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 288-461
Cow position: chr6:13742031-13742200 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 142
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 58, 0

Conread position: 288-461
Cow position: chr6:19563441-19563266 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 146
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 112, 0

Conread position: 288-461
Cow position: chr6:24903547-24903362 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 143
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 33, 0

Conread position: 288-461
Cow position: chr6:47150861-47151031 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 11, 118

Conread position: 289-460
Cow position: chr6:26408461-26408290 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 137
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 290-420
Cow position: chr6:16738405-16738534 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 107
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 104, 0

Conread position: 290-420
Cow position: chr6:21559179-21559049 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 104, 11

Conread position: 290-461
Cow position: chr6:6996853-6996686 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 91, 6

Conread position: 291-459
Cow position: chr6:47022606-47022770 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 133
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 108, 0

Conread position: 291-459
Cow position: chr6:49173512-49173344 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 117
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 291-461
Cow position: chr6:8187144-8186974 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 136
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 291-461
Cow position: chr6:10324845-10324675 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 121
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 292-459
Cow position: chr6:44540855-44541015 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 135
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 7, 0

Conread position: 292-461
Cow position: chr6:44544101-44543934 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 145
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 293-458
Cow position: chr6:1173909-1173737 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 108, 0

Conread position: 293-461
Cow position: chr6:27636362-27636530 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 293-461
Cow position: chr6:39356159-39356327 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 17, 152

Conread position: 293-461
Cow position: chr6:47450874-47450706 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 120
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 293-461
Cow position: chr6:55517923-55518090 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 118, 0

Conread position: 294-421
Cow position: chr6:32184999-32184871 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 100, 0

Conread position: 294-458
Cow position: chr6:59546111-59546275 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 294-459
Cow position: chr6:57248564-57248728 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 119
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 84, 0

Conread position: 294-460
Cow position: chr6:17172873-17173040 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 15, 56

Conread position: 294-460
Cow position: chr6:54820880-54821046 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 130
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 294-461
Cow position: chr6:633204-633030 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 103, 0

Conread position: 294-461
Cow position: chr6:48893883-48893716 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 117
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 295-421
Cow position: chr6:35702295-35702168 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 120, 0

Conread position: 295-457
Cow position: chr6:45160008-45159846 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 136
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 295-461
Cow position: chr6:19052666-19052832 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 119
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 295-461
Cow position: chr6:26054855-26054687 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 136
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 99, 0

Conread position: 295-461
Cow position: chr6:34722055-34721898 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 131
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 159, 56

Conread position: 296-458
Cow position: chr6:35985086-35984924 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 130
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 296-461
Cow position: chr6:50451893-50452059 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 103, 22

Conread position: 296-461
Cow position: chr6:63168713-63168550 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 113, 22

Conread position: 297-457
Cow position: chr6:48448876-48449027 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 297-457
Cow position: chr6:58363660-58363500 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 297-461
Cow position: chr6:48792829-48792993 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 297-461
Cow position: chr6:62805694-62805858 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 298-461
Cow position: chr6:18776303-18776459 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 53, 0

Conread position: 298-461
Cow position: chr6:31471127-31471292 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 118
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 298-461
Cow position: chr6:45980134-45979970 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 144, 149

Conread position: 298-461
Cow position: chr6:46161154-46160990 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 119
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 157, 0

Conread position: 298-461
Cow position: chr6:53765838-53765680 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 299-458
Cow position: chr6:57299811-57299980 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 135
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 5, 48

Conread position: 299-459
Cow position: chr6:19722660-19722819 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 113
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 79, 0

Conread position: 299-461
Cow position: chr6:57467650-57467812 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 134
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 300-450
Cow position: chr6:6850376-6850526 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 41, 106

Conread position: 300-458
Cow position: chr6:68246779-68246621 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 300-461
Cow position: chr6:59297107-59297258 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 81, 0

Conread position: 301-460
Cow position: chr6:19936514-19936356 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 129
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 77, 0

Conread position: 303-450
Cow position: chr6:66293542-66293689 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 303-453
Cow position: chr6:40833951-40833813 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 119
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 303-453
Cow position: chr6:55014936-55015089 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 125
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 91, 0

Conread position: 303-457
Cow position: chr6:18440420-18440266 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 128
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 303-457
Cow position: chr6:66329645-66329491 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 109
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 303-460
Cow position: chr6:13097342-13097186 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 102, 21

Conread position: 303-461
Cow position: chr6:14263833-14263676 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 130
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 31, 54

Conread position: 303-461
Cow position: chr6:21052392-21052233 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 132
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 97, 0

Conread position: 303-461
Cow position: chr6:28562111-28561955 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 128
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 73, 0

Conread position: 303-461
Cow position: chr6:32006397-32006243 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 107, 0

Conread position: 303-461
Cow position: chr6:32336088-32336252 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 127
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 17, 0

Conread position: 303-461
Cow position: chr6:34076219-34076376 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 128
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 51, 104

Conread position: 303-461
Cow position: chr6:36938925-36939087 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 131
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 95, 0

Conread position: 303-461
Cow position: chr6:49685876-49686033 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 130
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 18, 0

Conread position: 303-461
Cow position: chr6:50682240-50682086 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 127
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 36, 0

Conread position: 303-461
Cow position: chr6:58697574-58697416 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 125
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 304-456
Cow position: chr6:34224137-34224287 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 87, 63

Conread position: 304-461
Cow position: chr6:17404619-17404779 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 130
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 108, 42

Conread position: 304-461
Cow position: chr6:31520928-31521084 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 305-461
Cow position: chr6:60347568-60347412 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 306-453
Cow position: chr6:53811643-53811791 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 104, 0

Conread position: 306-460
Cow position: chr6:54889660-54889816 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 108, 0

Conread position: 306-460
Cow position: chr6:63012389-63012542 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 77, 0

Conread position: 306-461
Cow position: chr6:55919874-55919719 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 89, 98

Conread position: 307-461
Cow position: chr6:24651919-24651767 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 8, 0

Conread position: 307-461
Cow position: chr6:43906622-43906468 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 126
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 308-450
Cow position: chr6:55449996-55450136 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 99, 0

Conread position: 309-418
Cow position: chr6:38961744-38961635 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 309-457
Cow position: chr6:33290032-33290180 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 310-452
Cow position: chr6:29266068-29265916 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 5, 0

Conread position: 312-450
Cow position: chr6:14150313-14150175 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 313-457
Cow position: chr6:62224489-62224633 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 120
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 82, 121

Conread position: 316-461
Cow position: chr6:12099616-12099477 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 317-450
Cow position: chr6:19455329-19455460 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 100
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 87, 0

Conread position: 317-450
Cow position: chr6:36891723-36891857 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 92, 0

Conread position: 317-450
Cow position: chr6:67963984-67963853 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 88, 0

Conread position: 317-460
Cow position: chr6:53732053-53732197 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 118
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 94, 0

Conread position: 317-461
Cow position: chr6:34463516-34463378 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 116
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 90, 0

Conread position: 320-460
Cow position: chr6:4760066-4760205 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 101, 79

Conread position: 320-461
Cow position: chr6:7291390-7291524 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 54, 64

Conread position: 320-461
Cow position: chr6:8726752-8726890 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 105
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 74, 0

Conread position: 321-460
Cow position: chr6:55060938-55061082 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 117
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 89, 0

Conread position: 321-461
Cow position: chr6:16137695-16137554 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 121
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 68, 0

Conread position: 324-456
Cow position: chr6:14152812-14152681 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 111
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 82, 120

Conread position: 324-459
Cow position: chr6:10163744-10163885 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 96, 0

Conread position: 324-460
Cow position: chr6:21175416-21175546 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 90, 0

Conread position: 324-461
Cow position: chr6:16627813-16627942 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 83, 0

Conread position: 324-461
Cow position: chr6:29851447-29851581 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 73, 0

Conread position: 325-461
Cow position: chr6:47790720-47790585 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 67, 0

Conread position: 325-461
Cow position: chr6:59687733-59687597 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 327-461
Cow position: chr6:4049071-4048937 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 330-460
Cow position: chr6:31928721-31928851 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 110
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 331-453
Cow position: chr6:59101236-59101114 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 331-457
Cow position: chr6:67211839-67211714 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 81, 0

Conread position: 332-453
Cow position: chr6:29496079-29496200 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 333-460
Cow position: chr6:49825008-49824880 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 13, 57

Conread position: 333-461
Cow position: chr6:26764740-26764609 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 108
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 73, 0

Conread position: 333-461
Cow position: chr6:50445030-50444902 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 333-461
Cow position: chr6:55945876-55945743 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 74, 0

Conread position: 334-453
Cow position: chr6:57935484-57935369 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 334-461
Cow position: chr6:54828234-54828107 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 335-461
Cow position: chr6:16016123-16016248 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 104
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 53, 0

Conread position: 337-458
Cow position: chr6:15111750-15111625 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 340-461
Cow position: chr6:23381574-23381453 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 102
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 342-439
Cow position: chr6:34911403-34911305 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 344-461
Cow position: chr6:30688414-30688296 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 348-461
Cow position: chr6:57143594-57143481 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 356-455
Cow position: chr6:31778821-31778920 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.