Cow genome map

Conread name: ruio02_f11.y1

Conread position: 1-207
Cow position: chrX:11674786-11674994 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 152
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 90, 197

Conread position: 1-224
Cow position: chrX:10306401-10306621 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 120, 21

Conread position: 1-231
Cow position: chrX:12115769-12115998 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 178
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 69, 30

Conread position: 1-231
Cow position: chrX:14924728-14924953 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 30

Conread position: 1-231
Cow position: chrX:28111223-28111459 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 174
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 31, 190

Conread position: 1-231
Cow position: chrX:30162725-30162949 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 170
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 116, 30

Conread position: 1-231
Cow position: chrX:35681063-35681293 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 184
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 40, 138

Conread position: 1-231
Cow position: chrX:38439201-38439430 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 181
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 85, 41

Conread position: 1-264
Cow position: chrX:23061182-23061441 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 204
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 119, 30

Conread position: 1-301
Cow position: chrX:17497824-17498128 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 30

Conread position: 1-301
Cow position: chrX:40647706-40648029 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 36

Conread position: 1-308
Cow position: chrX:40452485-40452168 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 241
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 116, 30

Conread position: 1-310
Cow position: chrX:42874706-42875035 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 30

Conread position: 1-315
Cow position: chrX:42994342-42994670 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 39

Conread position: 1-367
Cow position: chrX:2467608-2467993 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 30

Conread position: 1-370
Cow position: chrX:26441052-26440676 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 30

Conread position: 1-373
Cow position: chrX:38936427-38936815 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 40

Conread position: 1-381
Cow position: chrX:47967328-47967728 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 288
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 119, 33

Conread position: 1-386
Cow position: chrX:35224030-35224424 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 281
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 119, 30

Conread position: 1-394
Cow position: chrX:11082885-11082486 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 30

Conread position: 1-395
Cow position: chrX:10412258-10411847 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 41

Conread position: 1-396
Cow position: chrX:11614449-11614831 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 30

Conread position: 1-396
Cow position: chrX:30543554-30543146 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 298
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 120, 36

Conread position: 1-397
Cow position: chrX:126519-126906 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 31

Conread position: 1-397
Cow position: chrX:7645986-7646395 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 30

Conread position: 1-415
Cow position: chrX:35388179-35387769 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 30

Conread position: 1-418
Cow position: chrX:8796978-8797407 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 25

Conread position: 1-418
Cow position: chrX:33639693-33640135 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 30

Conread position: 1-421
Cow position: chrX:11718052-11717618 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 30

Conread position: 1-433
Cow position: chrX:36311327-36311745 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 302
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 219, 38

Conread position: 1-439
Cow position: chrX:24288185-24287753 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 319
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 122, 26

Conread position: 1-448
Cow position: chrX:43114901-43115338 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 300
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 120, 30

Conread position: 1-452
Cow position: chrX:34754464-34753981 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 30

Conread position: 1-453
Cow position: chrX:5017678-5017217 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 321
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 120, 30

Conread position: 1-453
Cow position: chrX:42086590-42087022 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 40

Conread position: 1-453
Cow position: chrX:46032990-46032532 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 30

Conread position: 1-456
Cow position: chrX:7277658-7278108 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 21

Conread position: 1-456
Cow position: chrX:10866139-10865673 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 30

Conread position: 1-457
Cow position: chrX:161156-161601 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 30

Conread position: 1-457
Cow position: chrX:7351030-7351502 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 21

Conread position: 1-457
Cow position: chrX:13648056-13647586 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 30

Conread position: 1-457
Cow position: chrX:33466345-33466823 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 39

Conread position: 1-458
Cow position: chrX:34565028-34565484 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 17

Conread position: 1-460
Cow position: chrX:13868425-13868905 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 21

Conread position: 1-460
Cow position: chrX:15545625-15546082 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 30

Conread position: 1-460
Cow position: chrX:34554458-34554925 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 32

Conread position: 1-461
Cow position: chrX:1055660-1055179 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 332
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 119, 30

Conread position: 1-461
Cow position: chrX:1616323-1615856 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 40

Conread position: 1-461
Cow position: chrX:4633123-4632652 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 13

Conread position: 1-461
Cow position: chrX:4996339-4996791 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 318
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 172, 30

Conread position: 1-461
Cow position: chrX:8730807-8731296 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 30

Conread position: 1-461
Cow position: chrX:11655807-11656280 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 201

Conread position: 1-461
Cow position: chrX:11844510-11844038 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 21

Conread position: 1-461
Cow position: chrX:12290464-12290920 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 29

Conread position: 1-461
Cow position: chrX:12309660-12309183 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 22

Conread position: 1-461
Cow position: chrX:15485897-15485431 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 21

Conread position: 1-461
Cow position: chrX:22115554-22115112 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 45

Conread position: 1-461
Cow position: chrX:23564069-23563588 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 30

Conread position: 1-461
Cow position: chrX:26492730-26493209 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 38

Conread position: 1-461
Cow position: chrX:27442824-27442336 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 21

Conread position: 1-461
Cow position: chrX:27446419-27446885 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 21

Conread position: 1-461
Cow position: chrX:28632750-28632280 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 317
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 196, 30

Conread position: 1-461
Cow position: chrX:28847148-28846690 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 19

Conread position: 1-461
Cow position: chrX:31250119-31250592 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 31

Conread position: 1-461
Cow position: chrX:31729186-31729639 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 37

Conread position: 1-461
Cow position: chrX:31949203-31948732 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 30

Conread position: 1-461
Cow position: chrX:35268618-35269058 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 30

Conread position: 1-461
Cow position: chrX:38963840-38964299 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 26

Conread position: 1-461
Cow position: chrX:41790712-41790225 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 30

Conread position: 1-461
Cow position: chrX:47211122-47210634 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 325
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 76, 36

Conread position: 2-223
Cow position: chrX:44835087-44834864 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 165
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 118, 29

Conread position: 2-461
Cow position: chrX:27509292-27508822 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 30

Conread position: 3-209
Cow position: chrX:35409398-35409592 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 164
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 173, 28

Conread position: 3-231
Cow position: chrX:33855511-33855281 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 166
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 35, 223

Conread position: 3-415
Cow position: chrX:37836319-37836735 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 18

Conread position: 3-450
Cow position: chrX:30133594-30133129 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 34

Conread position: 3-460
Cow position: chrX:40183620-40183153 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 28

Conread position: 3-461
Cow position: chrX:21064016-21064484 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 28

Conread position: 3-461
Cow position: chrX:27705323-27705789 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 35

Conread position: 3-461
Cow position: chrX:47344024-47344501 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 28

Conread position: 5-224
Cow position: chrX:32978525-32978311 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 171
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 133, 24

Conread position: 5-224
Cow position: chrX:35609718-35609935 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 178
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 115, 26

Conread position: 5-231
Cow position: chrX:40557944-40557729 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 167
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 116, 26

Conread position: 5-231
Cow position: chrX:42462016-42461792 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 174
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 117, 26

Conread position: 5-256
Cow position: chrX:6543988-6544233 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 192
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 115, 26

Conread position: 5-292
Cow position: chrX:11581666-11581967 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 26

Conread position: 5-311
Cow position: chrX:48243720-48243413 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 212
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 112, 32

Conread position: 5-313
Cow position: chrX:28845576-28845888 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 237
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 151, 36

Conread position: 5-335
Cow position: chrX:42585336-42584997 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 248
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 172, 17

Conread position: 5-381
Cow position: chrX:48195309-48194913 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 281
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 115, 24

Conread position: 5-388
Cow position: chrX:8925438-8925828 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 17

Conread position: 5-397
Cow position: chrX:41122804-41123198 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 30

Conread position: 5-410
Cow position: chrX:29289308-29289730 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 26

Conread position: 5-420
Cow position: chrX:878636-878222 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 17

Conread position: 5-421
Cow position: chrX:27516265-27516681 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 26

Conread position: 5-450
Cow position: chrX:41879199-41878742 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 37

Conread position: 5-453
Cow position: chrX:31443089-31442645 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 26

Conread position: 5-457
Cow position: chrX:41403693-41404145 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 231

Conread position: 5-457
Cow position: chrX:41410241-41410693 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 231

Conread position: 5-459
Cow position: chrX:4269335-4268870 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 10

Conread position: 5-459
Cow position: chrX:15007419-15006959 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 36

Conread position: 5-461
Cow position: chrX:151633-152107 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 37

Conread position: 5-461
Cow position: chrX:16762504-16762970 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 26

Conread position: 5-461
Cow position: chrX:30921917-30922374 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 13

Conread position: 5-461
Cow position: chrX:34238453-34238925 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 34

Conread position: 5-461
Cow position: chrX:34454401-34454861 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 35

Conread position: 5-461
Cow position: chrX:40827015-40826548 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 37

Conread position: 6-397
Cow position: chrX:38227357-38226971 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 25

Conread position: 7-453
Cow position: chrX:15147452-15147003 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 23

Conread position: 7-453
Cow position: chrX:20340157-20339699 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 38

Conread position: 7-460
Cow position: chrX:44192708-44192241 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 16

Conread position: 8-210
Cow position: chrX:12826482-12826683 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 145
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 113, 23

Conread position: 8-224
Cow position: chrX:36250127-36249915 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 162
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 113, 34

Conread position: 8-390
Cow position: chrX:47481533-47481928 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 287
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 44, 23

Conread position: 11-461
Cow position: chrX:15596776-15597230 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 20

Conread position: 12-386
Cow position: chrX:19689957-19690343 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 29

Conread position: 18-244
Cow position: chrX:41198842-41199072 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 178
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 29, 144

Conread position: 19-233
Cow position: chrX:3654347-3654562 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 165
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 98, 25

Conread position: 25-390
Cow position: chrX:37232155-37232539 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 22

Conread position: 26-315
Cow position: chrX:45566375-45566682 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 223
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 6, 212

Conread position: 31-418
Cow position: chrX:9416941-9416524 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 288

Conread position: 42-461
Cow position: chrX:30963109-30962673 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 110

Conread position: 43-245
Cow position: chrX:41743677-41743878 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 33

Conread position: 43-457
Cow position: chrX:9635417-9634991 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 224

Conread position: 44-351
Cow position: chrX:12405604-12405288 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 238
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 132, 42

Conread position: 45-461
Cow position: chrX:22821813-22822257 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 157

Conread position: 45-461
Cow position: chrX:23497897-23497495 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 30

Conread position: 45-461
Cow position: chrX:30338160-30337752 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 276
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 26, 109

Conread position: 45-461
Cow position: chrX:40035683-40035237 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 11

Conread position: 46-223
Cow position: chrX:25411607-25411786 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 146
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 74, 30

Conread position: 46-224
Cow position: chrX:35288427-35288602 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 139
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 107, 0

Conread position: 46-224
Cow position: chrX:42339169-42338996 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 145
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 74, 114

Conread position: 46-233
Cow position: chrX:9997566-9997381 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 151
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 74, 30

Conread position: 46-318
Cow position: chrX:41167197-41166902 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 30

Conread position: 46-325
Cow position: chrX:40116192-40116484 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 220
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 74, 35

Conread position: 46-397
Cow position: chrX:30421172-30420813 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 33

Conread position: 46-397
Cow position: chrX:37119366-37119731 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 75

Conread position: 46-414
Cow position: chrX:45113395-45113776 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 145

Conread position: 46-415
Cow position: chrX:20697841-20697454 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 233

Conread position: 46-418
Cow position: chrX:27772189-27771808 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 276
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 74, 30

Conread position: 46-421
Cow position: chrX:13382091-13382488 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 269
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 31, 155

Conread position: 46-440
Cow position: chrX:28866225-28865823 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 22

Conread position: 46-447
Cow position: chrX:7178676-7179079 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 30

Conread position: 46-452
Cow position: chrX:34663072-34662653 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 16

Conread position: 46-457
Cow position: chrX:20677132-20677565 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 14

Conread position: 46-457
Cow position: chrX:21593050-21593490 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 154

Conread position: 46-457
Cow position: chrX:27394247-27393817 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 217

Conread position: 46-457
Cow position: chrX:27432152-27431723 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 154

Conread position: 46-457
Cow position: chrX:37489497-37489927 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 100

Conread position: 46-457
Cow position: chrX:45501915-45502336 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 155

Conread position: 46-458
Cow position: chrX:21672318-21672761 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 231

Conread position: 46-460
Cow position: chrX:4768517-4768929 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 87

Conread position: 46-460
Cow position: chrX:34502687-34503130 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 31

Conread position: 46-461
Cow position: chrX:5118718-5118296 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 289
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 77, 64

Conread position: 46-461
Cow position: chrX:5872080-5872534 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 209

Conread position: 46-461
Cow position: chrX:17794752-17795182 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 149

Conread position: 46-461
Cow position: chrX:25816129-25815697 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 97

Conread position: 46-461
Cow position: chrX:27514635-27515061 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 202

Conread position: 46-461
Cow position: chrX:28878395-28877964 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 90

Conread position: 46-461
Cow position: chrX:32020355-32019931 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 208

Conread position: 46-461
Cow position: chrX:32419977-32420413 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 162

Conread position: 46-461
Cow position: chrX:34441683-34441251 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 30

Conread position: 46-461
Cow position: chrX:38218482-38218915 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 30

Conread position: 47-244
Cow position: chrX:2383257-2383454 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 74, 30

Conread position: 47-244
Cow position: chrX:10373075-10373280 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 160
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 25, 163

Conread position: 47-257
Cow position: chrX:31745279-31745063 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 163
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 73, 120

Conread position: 47-309
Cow position: chrX:23970157-23970432 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 29

Conread position: 47-325
Cow position: chrX:6639892-6640164 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 183

Conread position: 47-343
Cow position: chrX:42507879-42507563 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 231

Conread position: 47-367
Cow position: chrX:27680171-27680507 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 30

Conread position: 47-371
Cow position: chrX:21004452-21004797 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 23

Conread position: 47-385
Cow position: chrX:15814865-15815209 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 75

Conread position: 47-388
Cow position: chrX:39558580-39558218 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 120

Conread position: 47-398
Cow position: chrX:11073423-11073051 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 47-429
Cow position: chrX:28134114-28134509 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 29

Conread position: 47-441
Cow position: chrX:16416276-16416685 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 40

Conread position: 47-453
Cow position: chrX:6278738-6278298 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 47-455
Cow position: chrX:44961515-44961950 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 123

Conread position: 47-459
Cow position: chrX:38549216-38549646 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 228

Conread position: 47-460
Cow position: chrX:31436248-31436670 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 107

Conread position: 47-460
Cow position: chrX:36975717-36976153 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 267

Conread position: 47-460
Cow position: chrX:38935049-38935480 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 277

Conread position: 47-461
Cow position: chrX:2206776-2206388 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 279
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 73, 113

Conread position: 47-461
Cow position: chrX:9201315-9201745 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 30

Conread position: 47-461
Cow position: chrX:12249573-12250017 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 75

Conread position: 47-461
Cow position: chrX:17231502-17231939 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 114

Conread position: 47-461
Cow position: chrX:20151618-20152050 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 310
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 75, 299

Conread position: 47-461
Cow position: chrX:23514250-23513805 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 49

Conread position: 47-461
Cow position: chrX:34543555-34543988 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 0

Conread position: 47-461
Cow position: chrX:42492742-42492319 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 15

Conread position: 47-461
Cow position: chrX:44054569-44055005 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 0

Conread position: 47-461
Cow position: chrX:45430249-45429828 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 149

Conread position: 47-461
Cow position: chrX:45598836-45598406 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 228

Conread position: 48-393
Cow position: chrX:42171530-42171162 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 28

Conread position: 49-440
Cow position: chrX:4044080-4043675 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 28

Conread position: 49-457
Cow position: chrX:41673873-41674298 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 153

Conread position: 51-224
Cow position: chrX:11806245-11806067 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 70, 148

Conread position: 51-308
Cow position: chrX:19015214-19015487 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 206
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 69, 82

Conread position: 51-313
Cow position: chrX:16790065-16789803 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 203
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 69, 25

Conread position: 51-343
Cow position: chrX:13265848-13265542 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 224
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 69, 115

Conread position: 51-381
Cow position: chrX:26625905-26625548 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 151

Conread position: 51-386
Cow position: chrX:42499257-42498923 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 147

Conread position: 51-397
Cow position: chrX:17662825-17662459 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 148

Conread position: 51-416
Cow position: chrX:17888634-17888265 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 81

Conread position: 51-450
Cow position: chrX:45967934-45968337 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 93

Conread position: 51-453
Cow position: chrX:20887872-20887451 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 25

Conread position: 51-453
Cow position: chrX:42381328-42380916 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 111

Conread position: 51-460
Cow position: chrX:31294770-31294368 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 19

Conread position: 51-461
Cow position: chrX:35542663-35543086 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 275

Conread position: 51-461
Cow position: chrX:42247412-42246979 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 110

Conread position: 52-229
Cow position: chrX:13245364-13245545 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 84, 148

Conread position: 52-379
Cow position: chrX:11856202-11856551 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 40

Conread position: 53-424
Cow position: chrX:6690474-6690096 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 93

Conread position: 53-457
Cow position: chrX:7721758-7722175 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 291

Conread position: 53-458
Cow position: chrX:22074574-22074995 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 142

Conread position: 53-461
Cow position: chrX:44396789-44397213 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 17

Conread position: 54-231
Cow position: chrX:29509669-29509489 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 146
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 66, 173

Conread position: 54-308
Cow position: chrX:15139770-15139497 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 203
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 20, 34

Conread position: 54-342
Cow position: chrX:20709846-20710158 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 231
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 67, 147

Conread position: 54-390
Cow position: chrX:7161847-7162188 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 236
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 66, 31

Conread position: 54-397
Cow position: chrX:46701044-46700710 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 241
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 67, 22

Conread position: 54-441
Cow position: chrX:4750523-4750154 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 274
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 119, 26

Conread position: 54-460
Cow position: chrX:1465962-1466364 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 103

Conread position: 54-461
Cow position: chrX:21642703-21642279 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 22

Conread position: 54-461
Cow position: chrX:21663084-21663497 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 38

Conread position: 54-461
Cow position: chrX:28013665-28013238 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 293
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 67, 215

Conread position: 55-224
Cow position: chrX:16324187-16324018 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 135
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 65, 13

Conread position: 55-317
Cow position: chrX:10437889-10437609 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 56-224
Cow position: chrX:6488363-6488523 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 132
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 64, 86

Conread position: 56-389
Cow position: chrX:1514624-1514288 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 101

Conread position: 56-456
Cow position: chrX:7336613-7337040 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 270
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 120, 57

Conread position: 56-457
Cow position: chrX:13177688-13177283 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 139

Conread position: 57-224
Cow position: chrX:19019334-19019160 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 145
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 20, 116

Conread position: 57-397
Cow position: chrX:1503117-1503466 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 259
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 64, 19

Conread position: 57-458
Cow position: chrX:46073044-46072631 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 114

Conread position: 58-256
Cow position: chrX:24200971-24201165 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 153
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 63, 19

Conread position: 58-461
Cow position: chrX:11633457-11633884 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 366

Conread position: 59-460
Cow position: chrX:36283125-36283541 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 334

Conread position: 59-461
Cow position: chrX:29602053-29601627 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 28

Conread position: 62-223
Cow position: chrX:25036918-25036750 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 9, 0

Conread position: 62-224
Cow position: chrX:14599312-14599479 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 136
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 59, 137

Conread position: 62-396
Cow position: chrX:29120841-29121185 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 15

Conread position: 67-460
Cow position: chrX:27174782-27175201 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 262

Conread position: 68-457
Cow position: chrX:841947-842356 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 84

Conread position: 68-461
Cow position: chrX:3579735-3580147 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 12

Conread position: 69-458
Cow position: chrX:14973945-14973558 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 202

Conread position: 70-329
Cow position: chrX:6234658-6234378 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 214
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 50, 82

Conread position: 70-449
Cow position: chrX:47046729-47046323 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 278

Conread position: 70-460
Cow position: chrX:9425951-9425561 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 132

Conread position: 70-461
Cow position: chrX:32329951-32330373 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 292
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 59, 34

Conread position: 71-460
Cow position: chrX:38852988-38853412 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 292
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 49, 278

Conread position: 72-244
Cow position: chrX:46315588-46315412 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 48, 127

Conread position: 72-458
Cow position: chrX:10831704-10831282 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 317

Conread position: 73-461
Cow position: chrX:46587611-46588022 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 357

Conread position: 76-293
Cow position: chrX:17908487-17908253 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 182
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 45, 99

Conread position: 76-450
Cow position: chrX:29545083-29544691 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 199

Conread position: 77-458
Cow position: chrX:36355921-36356303 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 8

Conread position: 77-461
Cow position: chrX:1176185-1175788 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 183

Conread position: 78-461
Cow position: chrX:1499468-1499856 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 68

Conread position: 79-397
Cow position: chrX:43780053-43779713 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 235
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 38, 123

Conread position: 80-293
Cow position: chrX:30833045-30832817 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 171
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 40, 81

Conread position: 81-343
Cow position: chrX:43973360-43973630 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 205
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 39, 130

Conread position: 82-231
Cow position: chrX:40809489-40809641 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 38, 145

Conread position: 82-318
Cow position: chrX:36961438-36961701 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 194
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 39, 198

Conread position: 82-461
Cow position: chrX:33000706-33001100 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 94

Conread position: 87-460
Cow position: chrX:8869601-8869203 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 355

Conread position: 88-421
Cow position: chrX:43730406-43730061 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 73

Conread position: 89-421
Cow position: chrX:23785463-23785809 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 185

Conread position: 91-420
Cow position: chrX:42235722-42235361 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 261
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 32, 0

Conread position: 94-461
Cow position: chrX:35383205-35382840 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 105

Conread position: 97-461
Cow position: chrX:32820847-32821242 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 11

Conread position: 103-436
Cow position: chrX:47186497-47186149 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 244
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 17, 141

Conread position: 104-457
Cow position: chrX:169701-169343 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 77

Conread position: 106-461
Cow position: chrX:35885903-35885530 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 325

Conread position: 107-450
Cow position: chrX:31252245-31252599 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 173

Conread position: 107-461
Cow position: chrX:6407376-6407746 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 63

Conread position: 110-457
Cow position: chrX:34792480-34792122 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 261
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 9, 59

Conread position: 110-461
Cow position: chrX:4398956-4399320 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 89

Conread position: 119-458
Cow position: chrX:14275895-14275549 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 241
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 28, 13

Conread position: 119-460
Cow position: chrX:27145464-27145800 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 75

Conread position: 121-461
Cow position: chrX:27227966-27228331 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 122-461
Cow position: chrX:23561721-23562075 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 14

Conread position: 124-396
Cow position: chrX:16532052-16532334 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 206
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 49, 108

Conread position: 129-421
Cow position: chrX:29680409-29680097 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 149

Conread position: 129-461
Cow position: chrX:21986441-21986099 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 239
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 51, 194

Conread position: 130-461
Cow position: chrX:4279259-4278917 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 142

Conread position: 132-421
Cow position: chrX:9365820-9365513 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 19

Conread position: 133-461
Cow position: chrX:29723596-29723953 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 257
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 43, 143

Conread position: 134-461
Cow position: chrX:25207987-25207659 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 142

Conread position: 134-461
Cow position: chrX:47280076-47279734 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 240
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 35, 60

Conread position: 136-303
Cow position: chrX:37750392-37750209 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 137-461
Cow position: chrX:48183431-48183108 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 222
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 54, 22

Conread position: 139-457
Cow position: chrX:37955694-37956046 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 142-397
Cow position: chrX:42873256-42873524 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 209
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 31, 127

Conread position: 142-461
Cow position: chrX:41870937-41871259 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 234
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 38, 52

Conread position: 143-421
Cow position: chrX:616397-616097 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 210
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 30, 282

Conread position: 143-457
Cow position: chrX:18204598-18204265 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 317

Conread position: 143-460
Cow position: chrX:41027022-41027361 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 145-461
Cow position: chrX:30840423-30840743 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 48

Conread position: 153-291
Cow position: chrX:10524812-10524669 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 153-461
Cow position: chrX:47609681-47609992 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 223
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 20, 70

Conread position: 155-461
Cow position: chrX:18111267-18111581 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 109

Conread position: 156-460
Cow position: chrX:40320283-40320608 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 234
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 17, 73

Conread position: 157-461
Cow position: chrX:46022668-46022977 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 217
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 23, 6

Conread position: 159-461
Cow position: chrX:4403195-4403520 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 232
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 14, 36

Conread position: 162-381
Cow position: chrX:45065048-45064814 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 169
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 11, 99

Conread position: 163-461
Cow position: chrX:13923758-13924063 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 217
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 63, 33

Conread position: 169-396
Cow position: chrX:21665330-21665103 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 163
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 27, 92

Conread position: 172-374
Cow position: chrX:41263017-41262818 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 19, 49

Conread position: 174-461
Cow position: chrX:29229908-29230209 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 208
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 71, 18

Conread position: 177-390
Cow position: chrX:12082408-12082192 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 149
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 6, 147

Conread position: 180-421
Cow position: chrX:41271072-41270823 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 183
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 70, 39

Conread position: 180-457
Cow position: chrX:41238435-41238164 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 208
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 18, 78

Conread position: 180-460
Cow position: chrX:48236739-48237017 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 210
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 27, 77

Conread position: 180-461
Cow position: chrX:13121850-13122146 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 181-421
Cow position: chrX:23562552-23562796 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 182
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 17, 74

Conread position: 182-456
Cow position: chrX:35985742-35986017 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 197
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 37, 24

Conread position: 183-381
Cow position: chrX:41111644-41111836 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 151
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 23, 77

Conread position: 184-453
Cow position: chrX:15820521-15820801 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 210
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 18, 69

Conread position: 185-397
Cow position: chrX:25283107-25282899 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 58, 41

Conread position: 185-431
Cow position: chrX:33205043-33204796 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 191
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 13, 56

Conread position: 185-460
Cow position: chrX:4296912-4296623 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 202
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 41, 61

Conread position: 185-460
Cow position: chrX:20957176-20957440 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 200
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 34, 22

Conread position: 185-461
Cow position: chrX:4109116-4109387 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 74

Conread position: 185-461
Cow position: chrX:10516177-10516456 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 19

Conread position: 185-461
Cow position: chrX:13146907-13147182 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 199
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 37, 58

Conread position: 185-461
Cow position: chrX:16324081-16323813 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 199
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 38, 11

Conread position: 185-461
Cow position: chrX:43150344-43150633 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 212

Conread position: 185-461
Cow position: chrX:44040107-44040379 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 201
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 41, 77

Conread position: 186-437
Cow position: chrX:23113204-23113461 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 198
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 34, 21

Conread position: 186-440
Cow position: chrX:16575049-16575294 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 67

Conread position: 187-459
Cow position: chrX:45140005-45139731 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 186
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 54, 39

Conread position: 188-461
Cow position: chrX:48558678-48558948 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 190-453
Cow position: chrX:38094591-38094330 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 131

Conread position: 190-461
Cow position: chrX:10859386-10859111 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 192
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 48, 31

Conread position: 191-413
Cow position: chrX:29553222-29553441 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 171
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 65, 7

Conread position: 192-459
Cow position: chrX:2675025-2674757 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 189
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 15, 55

Conread position: 192-461
Cow position: chrX:40685396-40685127 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 195
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 27, 11

Conread position: 193-322
Cow position: chrX:17301376-17301242 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 14, 0

Conread position: 193-339
Cow position: chrX:19003233-19003374 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 120
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 15, 64

Conread position: 193-396
Cow position: chrX:5679632-5679434 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 157
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 14, 36

Conread position: 193-414
Cow position: chrX:38728671-38728890 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 173
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 14, 74

Conread position: 193-416
Cow position: chrX:29549614-29549394 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 168
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 14, 131

Conread position: 193-457
Cow position: chrX:20168491-20168756 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 193

Conread position: 193-461
Cow position: chrX:12095840-12095569 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 54

Conread position: 193-461
Cow position: chrX:29938023-29938293 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 176
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 29, 241

Conread position: 193-461
Cow position: chrX:31489453-31489723 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 41

Conread position: 193-461
Cow position: chrX:36393411-36393139 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 190
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 12, 111

Conread position: 193-461
Cow position: chrX:40680544-40680817 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 194-453
Cow position: chrX:31515101-31515365 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 198
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 12, 217

Conread position: 195-461
Cow position: chrX:25464179-25463910 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 179
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 30, 67

Conread position: 196-421
Cow position: chrX:37129203-37129432 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 196-457
Cow position: chrX:34837120-34836873 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 184
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 11, 24

Conread position: 197-460
Cow position: chrX:45976860-45977125 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 184
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 20, 202

Conread position: 199-422
Cow position: chrX:32978137-32977922 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 168
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 20, 53

Conread position: 199-461
Cow position: chrX:296335-296594 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 193
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 20, 119

Conread position: 199-461
Cow position: chrX:42432568-42432312 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 16

Conread position: 202-460
Cow position: chrX:45543262-45543536 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 194
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 24, 0

Conread position: 204-328
Cow position: chrX:20790866-20790983 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 15, 51

Conread position: 204-397
Cow position: chrX:2003931-2003737 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 136
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 15, 55

Conread position: 204-398
Cow position: chrX:36514949-36514752 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 151
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 16, 0

Conread position: 204-400
Cow position: chrX:5900414-5900604 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 153
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 18, 51

Conread position: 204-431
Cow position: chrX:48044568-48044343 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 15, 54

Conread position: 204-448
Cow position: chrX:31627036-31626790 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 186
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 15, 125

Conread position: 204-449
Cow position: chrX:4515629-4515878 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 195
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 15, 155

Conread position: 204-457
Cow position: chrX:9651080-9650829 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 172
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 60, 197

Conread position: 204-457
Cow position: chrX:22387297-22387042 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 192
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 15, 51

Conread position: 204-458
Cow position: chrX:7648456-7648214 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 189
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 16, 41

Conread position: 204-458
Cow position: chrX:27261133-27261390 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 213

Conread position: 204-458
Cow position: chrX:44339379-44339121 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 115

Conread position: 204-459
Cow position: chrX:1360031-1360282 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 195
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 16, 48

Conread position: 204-460
Cow position: chrX:14955819-14955567 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 189
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 15, 29

Conread position: 204-460
Cow position: chrX:39352725-39352973 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 190
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 15, 98

Conread position: 204-461
Cow position: chrX:9252217-9251961 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 188
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 15, 69

Conread position: 204-461
Cow position: chrX:17949542-17949290 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 184
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 21, 41

Conread position: 204-461
Cow position: chrX:25035434-25035179 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 41

Conread position: 204-461
Cow position: chrX:26881623-26881360 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 193
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 15, 247

Conread position: 204-461
Cow position: chrX:27946111-27945851 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 173
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 18, 0

Conread position: 204-461
Cow position: chrX:35590812-35590556 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 168
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 18, 169

Conread position: 204-461
Cow position: chrX:36866116-36866375 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 164

Conread position: 204-461
Cow position: chrX:48003792-48004048 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 178
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 21, 42

Conread position: 204-461
Cow position: chrX:48071106-48071364 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 176
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 16, 41

Conread position: 206-403
Cow position: chrX:4153088-4152886 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 141
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 206-458
Cow position: chrX:38654485-38654233 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 198
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 13, 116

Conread position: 208-372
Cow position: chrX:29115660-29115819 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 11, 46

Conread position: 209-423
Cow position: chrX:6260198-6259985 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 162
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 10, 95

Conread position: 209-461
Cow position: chrX:33654887-33654641 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 37

Conread position: 210-393
Cow position: chrX:7806374-7806559 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 9, 139

Conread position: 211-461
Cow position: chrX:41941579-41941825 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 214-461
Cow position: chrX:24331735-24331979 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 215-452
Cow position: chrX:23188821-23188596 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 181
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 19, 41

Conread position: 215-461
Cow position: chrX:19469549-19469313 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 177
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 177, 0

Conread position: 218-312
Cow position: chrX:29488046-29487954 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 81
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 218-324
Cow position: chrX:48663919-48664025 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 90
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 218-360
Cow position: chrX:45993183-45993332 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 119
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 22, 40

Conread position: 218-396
Cow position: chrX:41992082-41991906 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 85, 14

Conread position: 218-397
Cow position: chrX:19943277-19943097 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 146
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 39, 122

Conread position: 218-397
Cow position: chrX:46429862-46429680 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 34, 0

Conread position: 218-421
Cow position: chrX:16348608-16348410 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 154
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 35, 101

Conread position: 218-451
Cow position: chrX:18964865-18964633 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 185
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 45, 87

Conread position: 218-453
Cow position: chrX:35822302-35822527 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 170
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 29, 120

Conread position: 218-457
Cow position: chrX:39220039-39220284 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 42

Conread position: 218-460
Cow position: chrX:34505091-34504852 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 175
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 29, 168

Conread position: 218-461
Cow position: chrX:8917357-8917597 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 181
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 37, 0

Conread position: 218-461
Cow position: chrX:9360848-9361086 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 176
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 36, 22

Conread position: 218-461
Cow position: chrX:10829393-10829637 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 164
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 172, 33

Conread position: 218-461
Cow position: chrX:24749047-24749289 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 176
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 38, 103

Conread position: 218-461
Cow position: chrX:25036947-25037194 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 0

Conread position: 218-461
Cow position: chrX:27511387-27511623 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 35

Conread position: 218-461
Cow position: chrX:45875353-45875592 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 181
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 40, 0

Conread position: 219-381
Cow position: chrX:45403866-45403703 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 128
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 33, 159

Conread position: 219-461
Cow position: chrX:38321426-38321181 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 183
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 32, 180

Conread position: 219-461
Cow position: chrX:44703111-44702863 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 45

Conread position: 219-461
Cow position: chrX:47873375-47873134 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 173
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 43, 26

Conread position: 221-337
Cow position: chrX:13136269-13136153 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 221-347
Cow position: chrX:1572174-1572050 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 109
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 30, 0

Conread position: 221-385
Cow position: chrX:20881976-20881818 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 137
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 94, 0

Conread position: 221-400
Cow position: chrX:43527473-43527650 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 30, 0

Conread position: 221-420
Cow position: chrX:11594040-11593833 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 72, 40

Conread position: 221-420
Cow position: chrX:46433455-46433652 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 221-437
Cow position: chrX:6541773-6541547 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 172
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 68, 190

Conread position: 221-440
Cow position: chrX:34315479-34315703 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 171
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 33, 0

Conread position: 221-453
Cow position: chrX:21327869-21328108 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 221-456
Cow position: chrX:27459819-27460063 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 175
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 42, 24

Conread position: 221-457
Cow position: chrX:30292-30532 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 171
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 42, 112

Conread position: 221-458
Cow position: chrX:11825677-11825444 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 161
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 26, 0

Conread position: 221-459
Cow position: chrX:40283089-40283323 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 34

Conread position: 221-461
Cow position: chrX:6559482-6559254 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 221-461
Cow position: chrX:11326137-11325906 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 173
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 34, 128

Conread position: 221-461
Cow position: chrX:19394515-19394757 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 176
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 34, 181

Conread position: 221-461
Cow position: chrX:19660500-19660252 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 174
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 29, 38

Conread position: 221-461
Cow position: chrX:24365862-24365620 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 134

Conread position: 221-461
Cow position: chrX:27380317-27380562 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 162
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 37, 21

Conread position: 221-461
Cow position: chrX:34222677-34222915 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 132

Conread position: 221-461
Cow position: chrX:36367979-36367732 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 184
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 45, 0

Conread position: 221-461
Cow position: chrX:42855416-42855665 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 221-461
Cow position: chrX:42893880-42894124 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 190

Conread position: 221-461
Cow position: chrX:45448862-45449112 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 168
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 221-461
Cow position: chrX:48010564-48010807 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 163
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 222-461
Cow position: chrX:4645948-4645712 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 222-461
Cow position: chrX:28940210-28940446 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 177
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 124, 12

Conread position: 222-461
Cow position: chrX:46532537-46532288 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 223-457
Cow position: chrX:32605112-32604870 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 171
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 35, 156

Conread position: 223-460
Cow position: chrX:5063217-5063439 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 176
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 35, 0

Conread position: 223-461
Cow position: chrX:17956660-17956891 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 224-374
Cow position: chrX:44860040-44859891 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 25, 0

Conread position: 224-374
Cow position: chrX:47750326-47750176 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 33, 16

Conread position: 224-381
Cow position: chrX:44660766-44660610 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 37, 16

Conread position: 224-381
Cow position: chrX:44660910-44660754 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 38, 21

Conread position: 224-381
Cow position: chrX:47300793-47300637 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 37, 16

Conread position: 224-381
Cow position: chrX:48111273-48111429 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 37, 18

Conread position: 224-381
Cow position: chrX:48398006-48397850 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 38, 21

Conread position: 224-381
Cow position: chrX:48652611-48652455 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 32, 16

Conread position: 224-400
Cow position: chrX:22915071-22914900 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 149
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 24, 0

Conread position: 224-414
Cow position: chrX:41192666-41192860 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 133
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 224-414
Cow position: chrX:47514669-47514479 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 174, 21

Conread position: 224-421
Cow position: chrX:40532078-40531880 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 139
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 28, 36

Conread position: 224-421
Cow position: chrX:45884008-45883808 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 37, 0

Conread position: 224-432
Cow position: chrX:47114140-47113934 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 141
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 21

Conread position: 224-451
Cow position: chrX:47300649-47300421 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 154
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 41, 0

Conread position: 224-451
Cow position: chrX:47302767-47302540 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 153
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 51, 21

Conread position: 224-451
Cow position: chrX:48652467-48652246 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 159
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 37, 16

Conread position: 224-452
Cow position: chrX:45064826-45064599 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 157
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 38, 21

Conread position: 224-453
Cow position: chrX:27301837-27302071 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 166
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 62, 34

Conread position: 224-457
Cow position: chrX:45124368-45124601 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 151
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 38, 21

Conread position: 224-457
Cow position: chrX:45488884-45489119 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 159
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 170, 0

Conread position: 224-459
Cow position: chrX:45391748-45391513 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 160
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 42, 21

Conread position: 224-459
Cow position: chrX:48473873-48474109 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 177
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 37, 16

Conread position: 224-460
Cow position: chrX:44834686-44834453 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 170
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 38, 21

Conread position: 224-460
Cow position: chrX:44837230-44837466 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 159
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 38, 21

Conread position: 224-460
Cow position: chrX:47013437-47013200 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 163
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 37, 22

Conread position: 224-461
Cow position: chrX:12219118-12219348 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 158
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 51, 20

Conread position: 224-461
Cow position: chrX:22393020-22392786 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 169
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 28, 158

Conread position: 224-461
Cow position: chrX:27075081-27074849 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 11

Conread position: 224-461
Cow position: chrX:44090888-44091125 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 164
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 38, 21

Conread position: 224-461
Cow position: chrX:44591096-44590859 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 166
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 38, 21

Conread position: 224-461
Cow position: chrX:44660622-44660386 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 181
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 38, 20

Conread position: 224-461
Cow position: chrX:44736890-44736653 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 165
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 21

Conread position: 224-461
Cow position: chrX:44796348-44796586 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 168
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 38, 21

Conread position: 224-461
Cow position: chrX:44859897-44859660 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 161
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 38, 21

Conread position: 224-461
Cow position: chrX:46722624-46722387 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 160
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 38, 21

Conread position: 224-461
Cow position: chrX:46793780-46793548 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 178
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 38, 21

Conread position: 224-461
Cow position: chrX:47358273-47358516 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 165
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 31, 20

Conread position: 224-461
Cow position: chrX:48194925-48194689 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 157
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 38, 21

Conread position: 224-461
Cow position: chrX:48198681-48198446 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 163
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 33, 16

Conread position: 224-461
Cow position: chrX:48397862-48397624 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 162
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 38, 21

Conread position: 224-461
Cow position: chrX:48532280-48532516 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 164
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 38, 21

Conread position: 224-461
Cow position: chrX:48574612-48574849 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 162
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 28, 35

Conread position: 225-461
Cow position: chrX:34540646-34540885 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 163
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 30, 20

Conread position: 225-461
Cow position: chrX:35431277-35431039 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 179
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 79, 26

Conread position: 226-461
Cow position: chrX:36392220-36391986 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 178
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 78, 12

Conread position: 227-395
Cow position: chrX:10305379-10305214 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 138
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 32, 89

Conread position: 227-419
Cow position: chrX:23498709-23498519 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 151
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 36, 94

Conread position: 228-461
Cow position: chrX:1397596-1397827 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 171
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 45, 17

Conread position: 228-461
Cow position: chrX:43152187-43151953 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 163
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 34, 43

Conread position: 228-461
Cow position: chrX:47484295-47484060 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 169
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 27, 13

Conread position: 230-381
Cow position: chrX:12218980-12219130 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 146, 0

Conread position: 230-433
Cow position: chrX:47238209-47238411 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 142
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 31, 10

Conread position: 230-450
Cow position: chrX:48659674-48659455 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 148
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 32, 14

Conread position: 230-458
Cow position: chrX:48570872-48570644 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 152
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 32, 15

Conread position: 231-421
Cow position: chrX:20743575-20743768 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 231-452
Cow position: chrX:32318276-32318494 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 175
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 26, 171

Conread position: 232-461
Cow position: chrX:45403572-45403343 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 159
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 43, 13

Conread position: 234-338
Cow position: chrX:4390843-4390741 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 237-400
Cow position: chrX:25411886-25412047 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 141
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 139, 0

Conread position: 237-461
Cow position: chrX:47750175-47749953 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 153
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 18, 182

Conread position: 238-461
Cow position: chrX:35275965-35276188 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 52

Conread position: 238-461
Cow position: chrX:42836164-42836383 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 241-460
Cow position: chrX:47255429-47255650 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 152
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 14, 0

Conread position: 242-459
Cow position: chrX:6267658-6267870 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 158
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 133, 9

Conread position: 242-461
Cow position: chrX:42282560-42282779 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 162
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 16, 25

Conread position: 242-461
Cow position: chrX:42450032-42449811 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 243-396
Cow position: chrX:22628342-22628189 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 111
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 17, 84

Conread position: 243-461
Cow position: chrX:18873285-18873059 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 153
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 245-392
Cow position: chrX:19273720-19273573 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 245-458
Cow position: chrX:20678152-20677948 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 165
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 12, 59

Conread position: 245-461
Cow position: chrX:3806670-3806880 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 245-461
Cow position: chrX:19965411-19965193 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 16, 0

Conread position: 245-461
Cow position: chrX:40336900-40337113 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 245-461
Cow position: chrX:46770975-46770760 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 165
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 123, 13

Conread position: 246-450
Cow position: chrX:29733603-29733391 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 167
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 14, 5

Conread position: 246-461
Cow position: chrX:26843281-26843064 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 166
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 16, 9

Conread position: 248-460
Cow position: chrX:11859548-11859335 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 8, 101

Conread position: 249-461
Cow position: chrX:40574953-40574741 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 152
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 16, 66

Conread position: 250-386
Cow position: chrX:25328623-25328488 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 251-458
Cow position: chrX:38587851-38587643 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 157
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 10, 0

Conread position: 252-392
Cow position: chrX:16830218-16830354 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 116
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 51, 0

Conread position: 252-453
Cow position: chrX:5679927-5679736 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 11, 50

Conread position: 252-453
Cow position: chrX:26205454-26205260 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 0

Conread position: 252-458
Cow position: chrX:11763007-11762812 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 163
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 151, 0

Conread position: 252-461
Cow position: chrX:30672402-30672182 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 0

Conread position: 252-461
Cow position: chrX:32574312-32574518 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 253-397
Cow position: chrX:4466962-4467106 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 253-453
Cow position: chrX:32943081-32942881 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 140
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 253-458
Cow position: chrX:24633679-24633893 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 156
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 72, 174

Conread position: 253-461
Cow position: chrX:1088145-1087946 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 63, 0

Conread position: 253-461
Cow position: chrX:16541660-16541454 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 5, 0

Conread position: 253-461
Cow position: chrX:29451546-29451343 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 164
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 122, 5

Conread position: 254-397
Cow position: chrX:38722117-38722261 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 39, 0

Conread position: 254-461
Cow position: chrX:39290355-39290557 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 199, 134

Conread position: 255-405
Cow position: chrX:38725806-38725955 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 120
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 52, 0

Conread position: 255-412
Cow position: chrX:24343577-24343417 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 20, 0

Conread position: 255-414
Cow position: chrX:42506230-42506077 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 255-420
Cow position: chrX:18046398-18046558 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 60, 0

Conread position: 255-420
Cow position: chrX:45099125-45099290 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 118
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 255-457
Cow position: chrX:42331275-42331474 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 154
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 38, 149

Conread position: 255-461
Cow position: chrX:1552966-1553172 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 18, 14

Conread position: 255-461
Cow position: chrX:8493063-8493269 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 19, 15

Conread position: 255-461
Cow position: chrX:11653761-11653969 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 168
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 54, 155

Conread position: 255-461
Cow position: chrX:23335975-23335773 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 255-461
Cow position: chrX:24170732-24170523 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 99

Conread position: 255-461
Cow position: chrX:26979792-26979589 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 162
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 136, 86

Conread position: 255-461
Cow position: chrX:29478721-29478924 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 0

Conread position: 256-453
Cow position: chrX:39180235-39180039 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 0

Conread position: 256-461
Cow position: chrX:35390741-35390561 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 74, 0

Conread position: 257-460
Cow position: chrX:43008608-43008811 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 161
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 19, 13

Conread position: 258-424
Cow position: chrX:31829461-31829295 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 131
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 258-457
Cow position: chrX:35658800-35658995 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 149
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 16, 0

Conread position: 258-461
Cow position: chrX:16984641-16984837 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 125, 0

Conread position: 258-461
Cow position: chrX:34420734-34420938 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 161

Conread position: 258-461
Cow position: chrX:47079627-47079830 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 259-460
Cow position: chrX:4328182-4327982 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 161
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 259-461
Cow position: chrX:32910105-32910299 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 160
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 92, 0

Conread position: 259-461
Cow position: chrX:47985214-47985415 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 126, 45

Conread position: 260-461
Cow position: chrX:5512614-5512414 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 136
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 118, 0

Conread position: 261-461
Cow position: chrX:17524381-17524181 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 261-461
Cow position: chrX:24336074-24335874 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 261-461
Cow position: chrX:25049279-25049079 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 261-461
Cow position: chrX:38967891-38968097 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 162
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 29, 76

Conread position: 262-460
Cow position: chrX:37856356-37856562 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 144
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 262-461
Cow position: chrX:4559743-4559936 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 157
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 43, 0

Conread position: 263-461
Cow position: chrX:1122538-1122344 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 264-387
Cow position: chrX:37665697-37665820 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 104
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 264-453
Cow position: chrX:1719121-1719302 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 147
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 143, 0

Conread position: 264-458
Cow position: chrX:19018825-19018629 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 156
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 150, 0

Conread position: 264-461
Cow position: chrX:38301815-38302016 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 157
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 154, 0

Conread position: 264-461
Cow position: chrX:41810161-41809973 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 158
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 11, 0

Conread position: 265-457
Cow position: chrX:19717529-19717712 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 150
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 17, 0

Conread position: 266-426
Cow position: chrX:25459726-25459564 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 132
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 93, 60

Conread position: 266-461
Cow position: chrX:35285181-35285376 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 162
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 267-453
Cow position: chrX:28836903-28837080 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 147
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 64, 0

Conread position: 267-461
Cow position: chrX:28067860-28068053 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 150
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 9, 0

Conread position: 268-397
Cow position: chrX:23266425-23266554 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 108
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 270-450
Cow position: chrX:23098192-23098018 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 101, 49

Conread position: 270-461
Cow position: chrX:19356481-19356666 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 162
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 65

Conread position: 271-418
Cow position: chrX:47342129-47342273 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 121
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 42, 0

Conread position: 271-421
Cow position: chrX:753165-753319 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 55, 0

Conread position: 271-461
Cow position: chrX:8759637-8759825 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 153
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 39, 22

Conread position: 271-461
Cow position: chrX:35620717-35620907 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 135
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 272-418
Cow position: chrX:36313992-36313846 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 120
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 272-452
Cow position: chrX:17704403-17704581 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 122, 0

Conread position: 272-453
Cow position: chrX:35392280-35392109 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 148
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 49, 0

Conread position: 272-461
Cow position: chrX:3494808-3494619 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 272-461
Cow position: chrX:30824001-30824187 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 143
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 15, 132

Conread position: 273-461
Cow position: chrX:907961-908143 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 98, 61

Conread position: 273-461
Cow position: chrX:24104854-24105042 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 274-421
Cow position: chrX:15166082-15166229 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 120, 43

Conread position: 274-457
Cow position: chrX:20583682-20583861 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 136, 0

Conread position: 274-460
Cow position: chrX:3651066-3651245 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 131
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 274-461
Cow position: chrX:31479987-31480168 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 119, 57

Conread position: 275-461
Cow position: chrX:19761771-19761951 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 149
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 132, 0

Conread position: 275-461
Cow position: chrX:20345470-20345653 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 148
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 26, 0

Conread position: 277-396
Cow position: chrX:18637508-18637630 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 277-400
Cow position: chrX:10075992-10076113 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 20, 0

Conread position: 277-457
Cow position: chrX:32877356-32877178 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 148
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 135, 125

Conread position: 277-461
Cow position: chrX:3507580-3507766 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 19, 75

Conread position: 277-461
Cow position: chrX:5026275-5026453 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 131
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 178, 122

Conread position: 278-457
Cow position: chrX:32747748-32747923 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 25, 125

Conread position: 278-461
Cow position: chrX:24425982-24425799 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 278-461
Cow position: chrX:41454934-41454751 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 280-415
Cow position: chrX:27296506-27296363 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 59, 51

Conread position: 281-460
Cow position: chrX:35681589-35681768 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 150
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 19, 119

Conread position: 282-424
Cow position: chrX:41082066-41081924 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 105
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 282-461
Cow position: chrX:51872-51700 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 144
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 30, 0

Conread position: 282-461
Cow position: chrX:8642070-8642247 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 150
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 282-461
Cow position: chrX:16763903-16763728 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 144
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 28, 127

Conread position: 282-461
Cow position: chrX:32866899-32867072 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 122, 0

Conread position: 284-461
Cow position: chrX:7911046-7910870 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 106, 72

Conread position: 284-461
Cow position: chrX:23359085-23358915 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 36, 0

Conread position: 284-461
Cow position: chrX:32191147-32190970 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 124
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 285-458
Cow position: chrX:1960398-1960226 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 139
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 133, 0

Conread position: 285-461
Cow position: chrX:11454213-11454376 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 138
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 61, 0

Conread position: 286-453
Cow position: chrX:46909843-46910004 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 136
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 118, 0

Conread position: 286-460
Cow position: chrX:48118704-48118535 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 109, 13

Conread position: 286-461
Cow position: chrX:34398756-34398581 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 286-461
Cow position: chrX:44995526-44995702 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 146
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 52, 0

Conread position: 287-400
Cow position: chrX:29563053-29562944 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 287-458
Cow position: chrX:28850758-28850917 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 137
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 12, 0

Conread position: 287-459
Cow position: chrX:11781282-11781447 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 136
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 109, 84

Conread position: 287-461
Cow position: chrX:2314590-2314416 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 145
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 287-461
Cow position: chrX:34270592-34270763 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 11, 0

Conread position: 288-396
Cow position: chrX:2551121-2551230 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 93
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 46, 0

Conread position: 288-407
Cow position: chrX:11582253-11582370 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 288-420
Cow position: chrX:23860964-23860831 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 110, 0

Conread position: 288-438
Cow position: chrX:23185516-23185370 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 7, 77

Conread position: 288-453
Cow position: chrX:4091954-4092119 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 144
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 288-457
Cow position: chrX:30958756-30958929 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 52, 0

Conread position: 288-457
Cow position: chrX:37749953-37749791 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 134
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 36, 0

Conread position: 288-460
Cow position: chrX:47601293-47601122 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 120
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 288-461
Cow position: chrX:9063155-9063328 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 122
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 288-461
Cow position: chrX:25930667-25930842 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 97, 162

Conread position: 288-461
Cow position: chrX:27416122-27416297 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 12, 49

Conread position: 288-461
Cow position: chrX:40648926-40649104 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 37, 15

Conread position: 289-460
Cow position: chrX:39427268-39427097 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 121
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 289-461
Cow position: chrX:18439027-18439199 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 122
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 289-461
Cow position: chrX:19795472-19795307 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 50, 5

Conread position: 290-421
Cow position: chrX:27667457-27667587 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 110
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 129, 114

Conread position: 290-459
Cow position: chrX:48822310-48822142 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 135
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 109, 0

Conread position: 290-460
Cow position: chrX:8326936-8327106 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 290-461
Cow position: chrX:14925308-14925475 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 140
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 30, 0

Conread position: 290-461
Cow position: chrX:31986542-31986370 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 139
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 51, 106

Conread position: 291-449
Cow position: chrX:45950855-45950703 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 291-451
Cow position: chrX:46533272-46533112 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 125
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 291-458
Cow position: chrX:42050237-42050070 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 291-461
Cow position: chrX:17498355-17498525 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 140
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 291-461
Cow position: chrX:33020470-33020640 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 165, 160

Conread position: 291-461
Cow position: chrX:36424245-36424075 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 117
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 292-461
Cow position: chrX:45412203-45412041 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 107, 7

Conread position: 293-457
Cow position: chrX:10278899-10279074 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 27, 0

Conread position: 293-461
Cow position: chrX:27270410-27270571 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 139
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 62, 115

Conread position: 293-461
Cow position: chrX:34991399-34991563 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 119
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 121, 0

Conread position: 294-421
Cow position: chrX:33151947-33151825 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 294-457
Cow position: chrX:876806-876649 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 131
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 41, 0

Conread position: 295-461
Cow position: chrX:16556180-16556021 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 130
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 81, 65

Conread position: 295-461
Cow position: chrX:42760289-42760455 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 133
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 296-456
Cow position: chrX:41435511-41435345 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 122, 0

Conread position: 296-460
Cow position: chrX:44123293-44123450 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 130
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 110, 0

Conread position: 296-461
Cow position: chrX:37752068-37751909 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 133
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 102, 0

Conread position: 298-458
Cow position: chrX:41858842-41858685 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 84, 115

Conread position: 298-460
Cow position: chrX:15139455-15139295 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 96, 14

Conread position: 298-461
Cow position: chrX:11813116-11813276 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 22, 0

Conread position: 298-461
Cow position: chrX:14951313-14951151 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 103, 0

Conread position: 298-461
Cow position: chrX:19203306-19203143 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 298-461
Cow position: chrX:35409792-35409954 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 135
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 62, 0

Conread position: 299-461
Cow position: chrX:11517939-11517776 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 107, 0

Conread position: 300-458
Cow position: chrX:10237870-10237714 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 130
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 7, 0

Conread position: 300-460
Cow position: chrX:46068717-46068562 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 129
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 98, 0

Conread position: 301-461
Cow position: chrX:19000169-19000329 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 302-453
Cow position: chrX:41010942-41011086 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 90, 0

Conread position: 303-443
Cow position: chrX:43143729-43143872 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 88, 0

Conread position: 303-450
Cow position: chrX:755969-756115 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 303-451
Cow position: chrX:31250850-31250702 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 106
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 303-456
Cow position: chrX:11781496-11781646 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 36, 103

Conread position: 303-458
Cow position: chrX:23471821-23471669 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 97, 0

Conread position: 303-460
Cow position: chrX:44225686-44225529 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 303-461
Cow position: chrX:1101602-1101752 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 87, 0

Conread position: 303-461
Cow position: chrX:5097754-5097591 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 39, 0

Conread position: 303-461
Cow position: chrX:13347318-13347471 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 48, 0

Conread position: 303-461
Cow position: chrX:18030372-18030214 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 303-461
Cow position: chrX:36468323-36468166 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 303-461
Cow position: chrX:39887169-39887010 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 23, 10

Conread position: 303-461
Cow position: chrX:41991089-41990921 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 99, 0

Conread position: 303-461
Cow position: chrX:42875257-42875411 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 131
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 96, 0

Conread position: 304-458
Cow position: chrX:37867477-37867632 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 125
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 13, 0

Conread position: 304-461
Cow position: chrX:10415207-10415050 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 304-461
Cow position: chrX:42461572-42461425 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 58, 0

Conread position: 305-441
Cow position: chrX:38346969-38347104 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 305-460
Cow position: chrX:6634391-6634546 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 305-460
Cow position: chrX:27202617-27202770 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 112
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 100, 0

Conread position: 305-461
Cow position: chrX:597427-597276 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 129
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 41, 0

Conread position: 305-461
Cow position: chrX:11674161-11674314 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 87, 18

Conread position: 305-461
Cow position: chrX:16007711-16007555 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 113
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 305-461
Cow position: chrX:31983538-31983376 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 100, 0

Conread position: 306-421
Cow position: chrX:2742293-2742180 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 78, 0

Conread position: 306-458
Cow position: chrX:36351706-36351858 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 103, 94

Conread position: 306-458
Cow position: chrX:37867301-37867453 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 123
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 306-460
Cow position: chrX:47100549-47100393 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 125
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 107, 88

Conread position: 306-461
Cow position: chrX:4602890-4602736 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 113
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 306-461
Cow position: chrX:25049051-25048900 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 7, 0

Conread position: 306-461
Cow position: chrX:36569008-36568855 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 32, 100

Conread position: 306-461
Cow position: chrX:41166777-41166627 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 77, 0

Conread position: 307-457
Cow position: chrX:25925593-25925457 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 120
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 99, 0

Conread position: 307-461
Cow position: chrX:1938063-1938215 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 92, 0

Conread position: 308-429
Cow position: chrX:24547451-24547330 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 308-461
Cow position: chrX:1121317-1121164 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 308-461
Cow position: chrX:41363809-41363648 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 115, 0

Conread position: 309-461
Cow position: chrX:1396167-1396319 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 110
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 309-461
Cow position: chrX:16770115-16770267 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 310-453
Cow position: chrX:4169979-4169840 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 118
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 138, 78

Conread position: 311-452
Cow position: chrX:24633469-24633330 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 313-421
Cow position: chrX:39418784-39418676 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 313-457
Cow position: chrX:26720629-26720489 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 15, 96

Conread position: 313-460
Cow position: chrX:41199279-41199423 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 41, 100

Conread position: 313-461
Cow position: chrX:6480541-6480393 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 313-461
Cow position: chrX:20977454-20977311 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 64, 130

Conread position: 313-461
Cow position: chrX:28106902-28107048 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 120
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 103, 0

Conread position: 314-460
Cow position: chrX:5915244-5915392 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 42, 0

Conread position: 317-421
Cow position: chrX:16481511-16481407 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 84
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 317-450
Cow position: chrX:21288549-21288414 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 61, 91

Conread position: 317-457
Cow position: chrX:11602424-11602286 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 317-461
Cow position: chrX:26882021-26881877 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 117
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 318-461
Cow position: chrX:41215382-41215525 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 320-450
Cow position: chrX:30042029-30041901 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 84, 0

Conread position: 320-453
Cow position: chrX:22552917-22552784 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 109
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 320-461
Cow position: chrX:11589305-11589165 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 114
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 104, 0

Conread position: 321-461
Cow position: chrX:16801200-16801065 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 30, 0

Conread position: 322-461
Cow position: chrX:3494981-3494848 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 322-461
Cow position: chrX:9451409-9451543 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 91, 45

Conread position: 324-461
Cow position: chrX:34194015-34193878 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 324-461
Cow position: chrX:48574291-48574152 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 79, 0

Conread position: 325-460
Cow position: chrX:45044519-45044655 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 69, 0

Conread position: 328-457
Cow position: chrX:39094252-39094132 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 328-458
Cow position: chrX:33678403-33678271 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 112
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 54, 0

Conread position: 328-460
Cow position: chrX:37717794-37717923 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 114
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 8, 0

Conread position: 328-461
Cow position: chrX:30789461-30789327 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 100
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 332-461
Cow position: chrX:42506875-42506744 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 109
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 62, 0

Conread position: 333-460
Cow position: chrX:3542931-3543066 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 334-461
Cow position: chrX:11670762-11670889 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 334-461
Cow position: chrX:34108282-34108156 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 111, 0

Conread position: 336-460
Cow position: chrX:28167057-28167180 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 68, 0

Conread position: 338-458
Cow position: chrX:35509599-35509481 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 71, 0

Conread position: 338-461
Cow position: chrX:17929081-17929200 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 339-461
Cow position: chrX:37844076-37844201 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 339-461
Cow position: chrX:42314811-42314689 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 340-461
Cow position: chrX:43028314-43028431 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 346-461
Cow position: chrX:1996364-1996249 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 97
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 351-461
Cow position: chrX:10479842-10479952 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 354-461
Cow position: chrX:42159037-42159144 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 92
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 355-461
Cow position: chrX:41194002-41194106 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 375-460
Cow position: chrX:32590289-32590204 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 75
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.