Cow genome map

Conread name: ruio04_d15.y1

Conread position: 10-496
Cow position: chr1:53250065-53250559 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 323
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 85, 25

Conread position: 10-538
Cow position: chr1:86511259-86510728 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 339
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 20, 14

Conread position: 15-386
Cow position: chr1:29915899-29915515 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 250
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 90, 179

Conread position: 17-482
Cow position: chr1:81102592-81102140 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 310
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 144, 38

Conread position: 20-405
Cow position: chr1:40539516-40539911 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 264
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 65, 119

Conread position: 86-389
Cow position: chr1:62928126-62927812 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 205
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 78, 103

Conread position: 91-350
Cow position: chr1:25119638-25119895 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 167
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 118, 202

Conread position: 91-352
Cow position: chr1:72808231-72807959 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 180
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 70, 98

Conread position: 91-358
Cow position: chr1:38479263-38478985 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 180
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 91-358
Cow position: chr1:39889728-39889452 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 181
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 70, 95

Conread position: 91-375
Cow position: chr1:6196628-6196921 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 191
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 70, 97

Conread position: 91-375
Cow position: chr1:28876749-28876454 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 189
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 91-375
Cow position: chr1:52355022-52355315 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 189
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 61, 47

Conread position: 91-375
Cow position: chr1:54116890-54116602 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 189
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 110, 68

Conread position: 91-375
Cow position: chr1:79554147-79553850 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 193
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 70, 98

Conread position: 91-375
Cow position: chr1:97075851-97076144 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 192
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 70, 49

Conread position: 91-386
Cow position: chr1:3263638-3263334 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 199
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 70, 95

Conread position: 91-386
Cow position: chr1:25052937-25053240 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 197
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 71, 295

Conread position: 91-386
Cow position: chr1:25553454-25553151 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 195
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 67, 32

Conread position: 91-386
Cow position: chr1:29038191-29037887 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 196
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 70, 8

Conread position: 91-386
Cow position: chr1:39234855-39235156 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 196
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 70, 98

Conread position: 91-386
Cow position: chr1:54933579-54933275 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 199
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 70, 98

Conread position: 91-386
Cow position: chr1:58340566-58340261 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 198
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 61, 180

Conread position: 91-386
Cow position: chr1:61097152-61096847 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 199
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 70, 98

Conread position: 91-386
Cow position: chr1:68145319-68145624 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 198
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 61, 98

Conread position: 91-386
Cow position: chr1:70864895-70864592 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 193
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 70, 273

Conread position: 91-386
Cow position: chr1:77925133-77924828 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 197
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 70, 98

Conread position: 91-386
Cow position: chr1:93858174-93857869 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 202
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 70, 103

Conread position: 91-389
Cow position: chr1:2990135-2989826 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 200
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 70, 98

Conread position: 91-389
Cow position: chr1:3931988-3932297 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 201
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 70, 98

Conread position: 91-389
Cow position: chr1:12374652-12374961 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 200
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 70, 98

Conread position: 91-389
Cow position: chr1:15463502-15463196 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 199
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 65, 107

Conread position: 91-389
Cow position: chr1:19157805-19158114 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 199
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 70, 98

Conread position: 91-389
Cow position: chr1:20848879-20849188 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 199
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 70, 98

Conread position: 91-389
Cow position: chr1:23861057-23861366 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 200
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 70, 98

Conread position: 91-389
Cow position: chr1:26536534-26536843 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 198
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 70, 98

Conread position: 91-389
Cow position: chr1:26588602-26588293 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 201
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 70, 98

Conread position: 91-389
Cow position: chr1:34533893-34533584 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 199
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 70, 98

Conread position: 91-389
Cow position: chr1:52381096-52380787 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 200
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 70, 98

Conread position: 91-389
Cow position: chr1:56666752-56666443 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 199
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 70, 98

Conread position: 91-389
Cow position: chr1:57506443-57506134 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 200
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 61, 98

Conread position: 91-389
Cow position: chr1:63340820-63341129 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 198
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 70, 0

Conread position: 91-389
Cow position: chr1:66145352-66145043 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 199
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 70, 98

Conread position: 91-389
Cow position: chr1:66368741-66369050 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 199
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 70, 98

Conread position: 91-389
Cow position: chr1:69503722-69504031 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 200
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 70, 98

Conread position: 91-389
Cow position: chr1:72589712-72590021 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 199
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 70, 98

Conread position: 91-389
Cow position: chr1:73564826-73565135 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 195
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 91-389
Cow position: chr1:74513491-74513800 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 199
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 70, 98

Conread position: 91-389
Cow position: chr1:75403546-75403237 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 198
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 70, 98

Conread position: 91-389
Cow position: chr1:80564425-80564734 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 202
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 70, 98

Conread position: 91-389
Cow position: chr1:83170094-83169785 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 196
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 91-389
Cow position: chr1:91673883-91673575 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 194
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 91-389
Cow position: chr1:99674684-99674993 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 200
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 70, 98

Conread position: 91-392
Cow position: chr1:89432055-89431743 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 204
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 70, 98

Conread position: 91-403
Cow position: chr1:46930302-46930625 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 208
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 70, 98

Conread position: 112-314
Cow position: chr1:56619315-56619528 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 40, 77

Conread position: 112-355
Cow position: chr1:87519135-87519383 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 171
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 97, 52

Conread position: 112-386
Cow position: chr1:61283050-61282770 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 183
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 49, 82

Conread position: 112-451
Cow position: chr1:86505722-86506072 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 229
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 40, 77

Conread position: 112-498
Cow position: chr1:64901296-64900913 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 250
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 49, 76

Conread position: 113-332
Cow position: chr1:75895740-75895964 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 160
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 84

Conread position: 113-340
Cow position: chr1:23160387-23160614 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 165
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 39, 74

Conread position: 113-354
Cow position: chr1:34858066-34858313 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 169
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 39, 76

Conread position: 113-356
Cow position: chr1:85295721-85295462 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 187
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 43, 77

Conread position: 113-373
Cow position: chr1:39140922-39141191 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 183
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 48, 237

Conread position: 113-393
Cow position: chr1:64945523-64945806 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 191
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 48, 76

Conread position: 113-542
Cow position: chr1:50939392-50939864 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 307
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 45, 76

Conread position: 114-358
Cow position: chr1:42740325-42740070 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 170
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 114-386
Cow position: chr1:13250917-13251198 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 186
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 47, 27

Conread position: 114-386
Cow position: chr1:30079569-30079288 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 186
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 47, 275

Conread position: 114-386
Cow position: chr1:79453134-79453413 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 190
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 47, 154

Conread position: 115-371
Cow position: chr1:74880740-74880995 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 175
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 118

Conread position: 116-317
Cow position: chr1:88110553-88110749 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 36, 49

Conread position: 116-375
Cow position: chr1:8845283-8845013 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 179
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 45, 73

Conread position: 116-386
Cow position: chr1:5505565-5505285 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 187
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 45, 272

Conread position: 116-389
Cow position: chr1:7406298-7406014 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 187
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 36, 73

Conread position: 116-389
Cow position: chr1:60250799-60251083 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 188
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 45, 73

Conread position: 116-389
Cow position: chr1:83060015-83060298 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 186
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 45, 73

Conread position: 116-394
Cow position: chr1:76748770-76749054 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 187
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 45, 0

Conread position: 117-386
Cow position: chr1:3930714-3930993 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 184
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 44, 72

Conread position: 117-386
Cow position: chr1:32562913-32563188 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 182
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 35, 77

Conread position: 117-386
Cow position: chr1:52371598-52371319 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 184
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 112

Conread position: 117-386
Cow position: chr1:66491203-66490928 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 178
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 44, 267

Conread position: 117-386
Cow position: chr1:99917065-99916786 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 182
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 35, 271

Conread position: 117-386
Cow position: chr1:100591147-100591426 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 182
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 271

Conread position: 117-394
Cow position: chr1:94663279-94662991 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 186
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 118-386
Cow position: chr1:12057629-12057902 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 184
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 43, 22

Conread position: 118-389
Cow position: chr1:17938128-17938411 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 186
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 118-389
Cow position: chr1:57362708-57362990 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 182
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 43, 0

Show alignments to all cow chromosomes.