Cow genome map
| Conread name: | ruio04_d15.y1 |
| Conread position: | 10-386 |
| Cow position: | chr10:8459983-8459595 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 42, 56 |
| Conread position: | 15-371 |
| Cow position: | chr10:58671772-58672144 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 256 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 68, 28 |
| Conread position: | 19-334 |
| Cow position: | chr10:40388586-40388243 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 230 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 23-364 |
| Cow position: | chr10:39299639-39299283 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 82, 32 |
| Conread position: | 91-317 |
| Cow position: | chr10:3998282-3998052 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 129, 36 |
| Conread position: | 91-326 |
| Cow position: | chr10:44866551-44866305 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 91-352 |
| Cow position: | chr10:62202724-62202996 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-358 |
| Cow position: | chr10:39037377-39037652 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 70, 160 |
| Conread position: | 91-375 |
| Cow position: | chr10:15490504-15490209 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-375 |
| Cow position: | chr10:58810100-58810388 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 70, 91 |
| Conread position: | 91-386 |
| Cow position: | chr10:6539454-6539154 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 70, 107 |
| Conread position: | 91-386 |
| Cow position: | chr10:32700627-32700322 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-386 |
| Cow position: | chr10:36878779-36879084 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 61, 98 |
| Conread position: | 91-389 |
| Cow position: | chr10:1376818-1377126 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr10:6221922-6221613 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr10:8682301-8681992 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr10:12653880-12653571 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr10:14422565-14422256 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 61, 98 |
| Conread position: | 91-389 |
| Cow position: | chr10:14971645-14971336 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr10:17123763-17124072 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr10:21466092-21466401 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr10:34334338-34334647 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr10:37138627-37138936 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr10:40591892-40591583 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 70, 92 |
| Conread position: | 91-389 |
| Cow position: | chr10:44113623-44113932 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr10:47910292-47909983 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 198 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 91-389 |
| Cow position: | chr10:48240880-48241189 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr10:49504610-49504301 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr10:53964113-53963804 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-393 |
| Cow position: | chr10:65347097-65347410 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 61, 98 |
| Conread position: | 91-396 |
| Cow position: | chr10:7497458-7497774 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 205 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-396 |
| Cow position: | chr10:28930427-28930743 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 112-354 |
| Cow position: | chr10:4995246-4995491 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 84, 54 |
| Conread position: | 112-368 |
| Cow position: | chr10:28933090-28932823 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 49, 82 |
| Conread position: | 112-373 |
| Cow position: | chr10:44083932-44083665 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 184 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 49, 80 |
| Conread position: | 112-394 |
| Cow position: | chr10:32395038-32394744 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 49, 77 |
| Conread position: | 113-392 |
| Cow position: | chr10:17450876-17450596 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 48, 126 |
| Conread position: | 115-354 |
| Cow position: | chr10:39265284-39265040 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 46, 73 |
| Conread position: | 115-418 |
| Cow position: | chr10:59519425-59519126 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 38, 72 |
| Conread position: | 116-386 |
| Cow position: | chr10:9517271-9516990 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 116-386 |
| Cow position: | chr10:26922637-26922917 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 45, 272 |
| Conread position: | 116-389 |
| Cow position: | chr10:53081895-53081611 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 45, 73 |
| Conread position: | 116-389 |
| Cow position: | chr10:57553489-57553773 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 45, 73 |
| Conread position: | 117-354 |
| Cow position: | chr10:31182530-31182773 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 44, 72 |
| Conread position: | 117-386 |
| Cow position: | chr10:14332190-14332469 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 44, 271 |
| Conread position: | 117-386 |
| Cow position: | chr10:19140971-19141238 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 44, 24 |
| Conread position: | 117-389 |
| Cow position: | chr10:53828233-53827949 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 118-314 |
| Cow position: | chr10:8518291-8518484 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 49, 94 |
| Conread position: | 118-358 |
| Cow position: | chr10:37041645-37041394 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 118-375 |
| Cow position: | chr10:51559050-51558782 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 118-386 |
| Cow position: | chr10:64304387-64304659 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 43, 235 |
| Conread position: | 118-390 |
| Cow position: | chr10:24099499-24099779 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 43, 71 |
Show alignments to all cow chromosomes.