Cow genome map
| Conread name: | ruio04_d15.y1 |
| Conread position: | 23-397 |
| Cow position: | chr13:34094457-34094839 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 259 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 70, 144 |
| Conread position: | 91-374 |
| Cow position: | chr13:30306804-30306511 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 70, 97 |
| Conread position: | 91-377 |
| Cow position: | chr13:14590123-14590420 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-386 |
| Cow position: | chr13:838017-838322 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-386 |
| Cow position: | chr13:2800274-2799969 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 70, 297 |
| Conread position: | 91-386 |
| Cow position: | chr13:4944780-4944475 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 70, 297 |
| Conread position: | 91-386 |
| Cow position: | chr13:9537627-9537326 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 70, 293 |
| Conread position: | 91-386 |
| Cow position: | chr13:14302597-14302901 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 70, 296 |
| Conread position: | 91-386 |
| Cow position: | chr13:14399685-14399991 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 70, 298 |
| Conread position: | 91-386 |
| Cow position: | chr13:32793952-32794258 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 61, 100 |
| Conread position: | 91-386 |
| Cow position: | chr13:47023309-47023614 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr13:7870174-7870481 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 71, 96 |
| Conread position: | 91-389 |
| Cow position: | chr13:26204069-26204378 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr13:28130636-28130942 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 70, 95 |
| Conread position: | 91-389 |
| Cow position: | chr13:28131893-28131587 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 201 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 70, 95 |
| Conread position: | 91-389 |
| Cow position: | chr13:29055038-29055347 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr13:35540791-35540485 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr13:43892211-43891902 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr13:51298098-51298407 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 67, 98 |
| Conread position: | 91-389 |
| Cow position: | chr13:53052226-53051917 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr13:56692660-56692351 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-398 |
| Cow position: | chr13:55573869-55574187 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 93-389 |
| Cow position: | chr13:3786772-3786465 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 68, 96 |
| Conread position: | 109-389 |
| Cow position: | chr13:4487225-4486934 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 112-317 |
| Cow position: | chr13:46597774-46597988 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 49, 77 |
| Conread position: | 112-332 |
| Cow position: | chr13:49195317-49195085 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 49, 77 |
| Conread position: | 112-375 |
| Cow position: | chr13:41807372-41807645 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 47, 77 |
| Conread position: | 112-389 |
| Cow position: | chr13:16344784-16345065 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 53, 76 |
| Conread position: | 112-389 |
| Cow position: | chr13:34905224-34905500 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 49, 74 |
| Conread position: | 113-353 |
| Cow position: | chr13:48051144-48050906 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 47, 21 |
| Conread position: | 113-353 |
| Cow position: | chr13:48611364-48611117 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 40, 175 |
| Conread position: | 113-358 |
| Cow position: | chr13:42896282-42896032 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 51, 126 |
| Conread position: | 113-385 |
| Cow position: | chr13:51184676-51184389 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 48, 68 |
| Conread position: | 114-358 |
| Cow position: | chr13:571192-570939 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 47, 66 |
| Conread position: | 116-386 |
| Cow position: | chr13:6664763-6665043 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 45, 274 |
| Conread position: | 116-386 |
| Cow position: | chr13:30468753-30469033 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 45, 274 |
| Conread position: | 116-389 |
| Cow position: | chr13:60465649-60465933 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 45, 73 |
| Conread position: | 116-396 |
| Cow position: | chr13:28449328-28449619 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 45, 73 |
| Conread position: | 117-389 |
| Cow position: | chr13:46056306-46056023 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 44, 72 |
| Conread position: | 123-375 |
| Cow position: | chr13:18329767-18330030 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 38, 0 |
Show alignments to all cow chromosomes.