Cow genome map
| Conread name: | ruio04_d15.y1 |
| Conread position: | 6-477 |
| Cow position: | chr15:33795124-33795627 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 336 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 83, 299 |
| Conread position: | 15-398 |
| Cow position: | chr15:9390493-9390119 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 253 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 88, 156 |
| Conread position: | 16-374 |
| Cow position: | chr15:34499656-34499288 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 54, 11 |
| Conread position: | 19-333 |
| Cow position: | chr15:16326541-16326876 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 19, 180 |
| Conread position: | 60-241 |
| Cow position: | chr15:16342333-16342525 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 40, 135 |
| Conread position: | 88-332 |
| Cow position: | chr15:23094240-23093989 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 73, 28 |
| Conread position: | 88-394 |
| Cow position: | chr15:40821391-40821075 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 64, 20 |
| Conread position: | 91-386 |
| Cow position: | chr15:4389011-4388706 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 195 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 70, 297 |
| Conread position: | 91-386 |
| Cow position: | chr15:5242791-5243094 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 61, 98 |
| Conread position: | 91-386 |
| Cow position: | chr15:6152380-6152685 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 70, 298 |
| Conread position: | 91-389 |
| Cow position: | chr15:678325-678016 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr15:4123047-4122738 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr15:6617062-6616753 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr15:6758213-6758522 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr15:7267865-7267556 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr15:23666230-23666539 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr15:36329196-36329505 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 198 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 70, 195 |
| Conread position: | 91-389 |
| Cow position: | chr15:41029055-41029364 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 61, 98 |
| Conread position: | 91-389 |
| Cow position: | chr15:45211276-45210967 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 61, 98 |
| Conread position: | 91-389 |
| Cow position: | chr15:45944434-45944741 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 70, 95 |
| Conread position: | 91-389 |
| Cow position: | chr15:50142523-50142214 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr15:50308208-50308520 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 91-390 |
| Cow position: | chr15:4214424-4214114 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 91-393 |
| Cow position: | chr15:21826130-21825818 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 61, 98 |
| Conread position: | 91-461 |
| Cow position: | chr15:2796602-2796233 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 242 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 62, 53 |
| Conread position: | 112-358 |
| Cow position: | chr15:36618915-36619169 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 49, 57 |
| Conread position: | 113-364 |
| Cow position: | chr15:12770785-12770535 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 48, 66 |
| Conread position: | 113-375 |
| Cow position: | chr15:5472716-5472441 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 113-487 |
| Cow position: | chr15:41475170-41475547 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 88, 72 |
| Conread position: | 114-371 |
| Cow position: | chr15:29329991-29330249 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 84, 10 |
| Conread position: | 114-382 |
| Cow position: | chr15:48288077-48287803 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 203 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 47, 75 |
| Conread position: | 116-375 |
| Cow position: | chr15:4642438-4642169 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 175 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 116-386 |
| Cow position: | chr15:2080569-2080290 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 181 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 45, 271 |
| Conread position: | 116-389 |
| Cow position: | chr15:2533970-2533686 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 45, 73 |
| Conread position: | 116-426 |
| Cow position: | chr15:19103877-19104186 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 46, 73 |
| Conread position: | 117-358 |
| Cow position: | chr15:21532899-21533151 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 35, 72 |
Show alignments to all cow chromosomes.