Cow genome map
| Conread name: | ruio04_d15.y1 |
| Conread position: | 15-374 |
| Cow position: | chr17:3729998-3730367 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 249 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 84, 181 |
| Conread position: | 15-385 |
| Cow position: | chr17:9753343-9752956 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 244 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 82, 178 |
| Conread position: | 15-390 |
| Cow position: | chr17:22500947-22500550 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 267 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 79, 21 |
| Conread position: | 20-385 |
| Cow position: | chr17:9229702-9230083 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 258 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 78, 134 |
| Conread position: | 21-354 |
| Cow position: | chr17:27435337-27434978 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 76, 354 |
| Conread position: | 88-389 |
| Cow position: | chr17:37528493-37528805 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 73, 101 |
| Conread position: | 91-386 |
| Cow position: | chr17:25834893-25834588 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 61, 98 |
| Conread position: | 91-389 |
| Cow position: | chr17:1970627-1970318 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr17:5638416-5638721 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr17:5672044-5672349 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr17:5806013-5806322 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr17:6612498-6612189 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr17:15093986-15094295 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 201 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr17:15559048-15558739 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 199 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr17:16505270-16505580 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 91-389 |
| Cow position: | chr17:20546613-20546304 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr17:21716938-21716629 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr17:36284743-36284434 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 197 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-396 |
| Cow position: | chr17:39823718-39824034 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 203 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-423 |
| Cow position: | chr17:15334979-15335303 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 67, 96 |
| Conread position: | 112-311 |
| Cow position: | chr17:3306040-3305835 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 112-386 |
| Cow position: | chr17:7615236-7615509 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 47, 74 |
| Conread position: | 112-391 |
| Cow position: | chr17:15701253-15701534 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 47, 202 |
| Conread position: | 113-317 |
| Cow position: | chr17:3049754-3049542 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 48, 76 |
| Conread position: | 113-332 |
| Cow position: | chr17:40908446-40908668 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 49, 74 |
| Conread position: | 113-364 |
| Cow position: | chr17:29823002-29822741 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 48, 76 |
| Conread position: | 115-492 |
| Cow position: | chr17:23278964-23279342 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 253 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 37, 28 |
| Conread position: | 116-389 |
| Cow position: | chr17:38992203-38991919 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 187 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 45, 73 |
| Conread position: | 117-404 |
| Cow position: | chr17:37701398-37701096 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 197 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 44, 72 |
| Conread position: | 118-313 |
| Cow position: | chr17:28024442-28024642 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 34, 69 |
| Conread position: | 133-382 |
| Cow position: | chr17:13180948-13180689 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 19, 56 |
Show alignments to all cow chromosomes.