Cow genome map
| Conread name: | ruio04_d15.y1 |
| Conread position: | 15-317 |
| Cow position: | chr18:30435325-30435645 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 92, 178 |
| Conread position: | 15-389 |
| Cow position: | chr18:13270696-13270300 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 256 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 44, 26 |
| Conread position: | 15-389 |
| Cow position: | chr18:51601873-51602275 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 260 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 44, 26 |
| Conread position: | 15-414 |
| Cow position: | chr18:22482449-22482035 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 279 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 49, 262 |
| Conread position: | 16-393 |
| Cow position: | chr18:25200535-25200142 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 261 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 20, 40 |
| Conread position: | 91-358 |
| Cow position: | chr18:35057710-35057446 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 70, 95 |
| Conread position: | 91-371 |
| Cow position: | chr18:19634045-19633763 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-375 |
| Cow position: | chr18:36134939-36135234 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-386 |
| Cow position: | chr18:54065376-54065680 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 70, 298 |
| Conread position: | 91-389 |
| Cow position: | chr18:21579855-21580164 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 199 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr18:29072116-29071811 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr18:30844207-30844514 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr18:37733388-37733079 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 70, 92 |
| Conread position: | 91-389 |
| Cow position: | chr18:42629063-42628754 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr18:51580086-51580395 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-491 |
| Cow position: | chr18:25924068-25923641 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 272 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 96-313 |
| Cow position: | chr18:14869649-14869426 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 64, 93 |
| Conread position: | 112-332 |
| Cow position: | chr18:41498536-41498314 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 49, 77 |
| Conread position: | 112-354 |
| Cow position: | chr18:30846389-30846634 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 49, 77 |
| Conread position: | 113-311 |
| Cow position: | chr18:12241489-12241285 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 48, 86 |
| Conread position: | 113-371 |
| Cow position: | chr18:51300919-51300667 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 34, 76 |
| Conread position: | 113-418 |
| Cow position: | chr18:19271170-19270867 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 48, 84 |
| Conread position: | 113-463 |
| Cow position: | chr18:28929773-28930121 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 82, 46 |
| Conread position: | 116-364 |
| Cow position: | chr18:33616748-33617007 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 45, 73 |
| Conread position: | 116-374 |
| Cow position: | chr18:44025119-44024859 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 45, 81 |
| Conread position: | 116-386 |
| Cow position: | chr18:37509632-37509356 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 45, 7 |
| Conread position: | 116-389 |
| Cow position: | chr18:10292405-10292121 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 45, 73 |
| Conread position: | 116-389 |
| Cow position: | chr18:11870161-11869877 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 45, 73 |
| Conread position: | 116-389 |
| Cow position: | chr18:29079411-29079127 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 45, 73 |
| Conread position: | 116-389 |
| Cow position: | chr18:51690471-51690187 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 45, 73 |
| Conread position: | 117-386 |
| Cow position: | chr18:14419650-14419371 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 44, 229 |
| Conread position: | 118-386 |
| Cow position: | chr18:16094553-16094279 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 43, 267 |
| Conread position: | 123-375 |
| Cow position: | chr18:16172949-16173209 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 123-386 |
| Cow position: | chr18:29862941-29863210 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 38, 262 |
| Conread position: | 160-364 |
| Cow position: | chr18:44541398-44541601 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 97, 25 |
Show alignments to all cow chromosomes.