Cow genome map
| Conread name: | ruio04_d15.y1 |
| Conread position: | 15-313 |
| Cow position: | chr22:37996619-37996917 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 47, 56 |
| Conread position: | 15-382 |
| Cow position: | chr22:1591731-1591340 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 15-397 |
| Cow position: | chr22:41513394-41512976 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 273 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 44, 9 |
| Conread position: | 18-309 |
| Cow position: | chr22:23716103-23716411 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 80, 157 |
| Conread position: | 19-337 |
| Cow position: | chr22:11659168-11659506 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 226 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 75, 183 |
| Conread position: | 20-313 |
| Cow position: | chr22:8188782-8188490 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 198 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 51, 35 |
| Conread position: | 84-389 |
| Cow position: | chr22:3488723-3489040 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 204 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 9, 106 |
| Conread position: | 91-317 |
| Cow position: | chr22:556727-556959 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 91-352 |
| Cow position: | chr22:14845157-14845429 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 61, 98 |
| Conread position: | 91-354 |
| Cow position: | chr22:45013379-45013648 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 8, 15 |
| Conread position: | 91-373 |
| Cow position: | chr22:3274752-3275045 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 190 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 70, 92 |
| Conread position: | 91-375 |
| Cow position: | chr22:6340253-6339962 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 91-375 |
| Cow position: | chr22:29397685-29397394 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 70, 117 |
| Conread position: | 91-386 |
| Cow position: | chr22:22107647-22107343 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 70, 92 |
| Conread position: | 91-386 |
| Cow position: | chr22:31316144-31315843 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 128, 293 |
| Conread position: | 91-386 |
| Cow position: | chr22:32210217-32209912 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 196 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 70, 297 |
| Conread position: | 91-387 |
| Cow position: | chr22:39464936-39465242 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 70, 299 |
| Conread position: | 91-389 |
| Cow position: | chr22:8776113-8776422 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr22:9285137-9285446 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr22:13242987-13243296 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 91-389 |
| Cow position: | chr22:20569437-20569746 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr22:32944053-32943744 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr22:33378938-33379247 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 201 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr22:39902986-39902677 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 200 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 61, 98 |
| Conread position: | 91-389 |
| Cow position: | chr22:40828462-40828772 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-428 |
| Cow position: | chr22:11988114-11988446 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 222 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 68, 100 |
| Conread position: | 107-389 |
| Cow position: | chr22:43261451-43261160 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 44, 82 |
| Conread position: | 112-289 |
| Cow position: | chr22:32394364-32394184 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 45, 76 |
| Conread position: | 113-354 |
| Cow position: | chr22:37726764-37726515 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 39, 163 |
| Conread position: | 113-354 |
| Cow position: | chr22:44195343-44195099 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 48, 76 |
| Conread position: | 113-389 |
| Cow position: | chr22:4709752-4710039 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 48, 77 |
| Conread position: | 113-394 |
| Cow position: | chr22:24146647-24146359 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 49, 34 |
| Conread position: | 113-427 |
| Cow position: | chr22:33436601-33436919 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 48, 75 |
| Conread position: | 113-428 |
| Cow position: | chr22:43566926-43567244 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 48, 81 |
| Conread position: | 114-292 |
| Cow position: | chr22:10385962-10385773 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 42, 75 |
| Conread position: | 114-386 |
| Cow position: | chr22:21593005-21592723 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 184 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 38, 274 |
| Conread position: | 116-375 |
| Cow position: | chr22:3433383-3433653 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 116-386 |
| Cow position: | chr22:3807254-3806976 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 180 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 27, 272 |
| Conread position: | 116-386 |
| Cow position: | chr22:19140126-19140406 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 48, 265 |
| Conread position: | 116-389 |
| Cow position: | chr22:43279903-43280187 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 185 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 45, 73 |
| Conread position: | 116-393 |
| Cow position: | chr22:22607738-22607452 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 45, 73 |
| Conread position: | 116-492 |
| Cow position: | chr22:9269779-9269396 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 246 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 45, 272 |
| Conread position: | 117-304 |
| Cow position: | chr22:6678164-6678359 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 44, 71 |
| Conread position: | 117-371 |
| Cow position: | chr22:3941636-3941371 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 44, 77 |
| Conread position: | 117-386 |
| Cow position: | chr22:29464465-29464191 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 44, 78 |
| Conread position: | 117-386 |
| Cow position: | chr22:37290275-37290553 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 183 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 44, 241 |
| Conread position: | 118-367 |
| Cow position: | chr22:6229182-6229437 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 118-386 |
| Cow position: | chr22:41845991-41846269 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 43, 272 |
| Conread position: | 123-386 |
| Cow position: | chr22:17324929-17325202 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 38, 169 |
| Conread position: | 126-390 |
| Cow position: | chr22:7596323-7596048 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 35, 69 |
Show alignments to all cow chromosomes.